RNA–Protein interactions for RNA: ENST00000607055.1

NECAB3-221, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 4

Gene NECAB3, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-221ENST00000607055 ACSF3Q4G176 576 aaPredicted RBP19.4■□□□□ 0.7
NECAB3-221ENST00000607055 PODNL1Q6PEZ8 512 aa19.4■□□□□ 0.7
NECAB3-221ENST00000607055 PLXDC2Q6UX71 529 aa19.4■□□□□ 0.7
NECAB3-221ENST00000607055 ZNF730Q6ZMV8 503 aa19.4■□□□□ 0.7
NECAB3-221ENST00000607055 C10orf67Q8IYJ2 551 aa19.4■□□□□ 0.7
NECAB3-221ENST00000607055 C10orf53Q8N6V4 93 aa19.4■□□□□ 0.7
NECAB3-221ENST00000607055 PFN4Q8NHR9 129 aa19.4■□□□□ 0.7
NECAB3-221ENST00000607055 SLC7A13Q8TCU3 470 aa19.4■□□□□ 0.7
NECAB3-221ENST00000607055 ZPLD1Q8TCW7 415 aa19.4■□□□□ 0.7
NECAB3-221ENST00000607055 ACOT11Q8WXI4 607 aaPredicted RBP19.4■□□□□ 0.7
NECAB3-221ENST00000607055 TAAR8Q969N4 342 aa19.4■□□□□ 0.7
NECAB3-221ENST00000607055 PTDSS2Q9BVG9 487 aa19.4■□□□□ 0.7
NECAB3-221ENST00000607055 TAPBPLQ9BX59 468 aa19.4■□□□□ 0.7
NECAB3-221ENST00000607055 SRXN1Q9BYN0 137 aa19.4■□□□□ 0.7
NECAB3-221ENST00000607055 SLC19A3Q9BZV2 496 aa19.4■□□□□ 0.7
NECAB3-221ENST00000607055 TP63Q9H3D4 680 aaPredicted RBP19.4■□□□□ 0.7
NECAB3-221ENST00000607055 TIGARQ9NQ88 270 aa19.4■□□□□ 0.7
NECAB3-221ENST00000607055 ARMC1Q9NVT9 282 aa19.4■□□□□ 0.7
NECAB3-221ENST00000607055 VNN3Q9NY84 501 aa19.4■□□□□ 0.7
NECAB3-221ENST00000607055 MED31Q9Y3C7 131 aa19.4■□□□□ 0.7
NECAB3-221ENST00000607055 ZGRF1Q86YA3 2104 aa19.39■□□□□ 0.69
NECAB3-221ENST00000607055 A0A087WUU8 490 aa19.39■□□□□ 0.69
NECAB3-221ENST00000607055 TNFRSF11BO00300 401 aa19.39■□□□□ 0.69
NECAB3-221ENST00000607055 GNGT2O14610 69 aa19.39■□□□□ 0.69
NECAB3-221ENST00000607055 SYNGR4O95473 234 aa19.39■□□□□ 0.69
NECAB3-221ENST00000607055 PMS2P2O95744 297 aa19.39■□□□□ 0.69
NECAB3-221ENST00000607055 ACVR2AP27037 513 aa19.39■□□□□ 0.69
NECAB3-221ENST00000607055 CSNK2A1P68400 391 aaPredicted RBP19.39■□□□□ 0.69
NECAB3-221ENST00000607055 LSM11P83369 360 aaKnown RBP eCLIP19.39■□□□□ 0.69
NECAB3-221ENST00000607055 PPP1R8Q12972 351 aaKnown RBP19.39■□□□□ 0.69
NECAB3-221ENST00000607055 SF3B4Q15427 424 aaKnown RBP eCLIP19.39■□□□□ 0.692e-7■■■■■ 35.3
NECAB3-221ENST00000607055 OR7A5Q15622 319 aa19.39■□□□□ 0.69
NECAB3-221ENST00000607055 C1orf185Q5T7R7 199 aa19.39■□□□□ 0.69
NECAB3-221ENST00000607055 TBPL2Q6SJ96 375 aa19.39■□□□□ 0.69
NECAB3-221ENST00000607055 SLC25A36Q96CQ1 311 aa19.39■□□□□ 0.69
NECAB3-221ENST00000607055 REEP1Q9H902 201 aa19.39■□□□□ 0.69
NECAB3-221ENST00000607055 MEPEQ9NQ76 525 aaPredicted RBP19.39■□□□□ 0.69
NECAB3-221ENST00000607055 PAQR5Q9NXK6 330 aaPredicted RBP19.39■□□□□ 0.69
NECAB3-221ENST00000607055 TRAPPC4Q9Y296 219 aa19.39■□□□□ 0.69
NECAB3-221ENST00000607055 LIPT2A6NK58 231 aa19.38■□□□□ 0.69
NECAB3-221ENST00000607055 ENO4A6NNW6 628 aa19.38■□□□□ 0.69
NECAB3-221ENST00000607055 KDM4EB2RXH2 506 aaPredicted RBP19.38■□□□□ 0.69
NECAB3-221ENST00000607055 KRT36O76013 467 aa19.38■□□□□ 0.69
NECAB3-221ENST00000607055 FPR1P21462 350 aa19.38■□□□□ 0.69
NECAB3-221ENST00000607055 CBLP22681 906 aa19.38■□□□□ 0.69
NECAB3-221ENST00000607055 PTGER4P35408 488 aa19.38■□□□□ 0.69
NECAB3-221ENST00000607055 RAC3P60763 192 aa19.38■□□□□ 0.69
NECAB3-221ENST00000607055 GTF3C1Q12789 2109 aa19.38■□□□□ 0.69
NECAB3-221ENST00000607055 PON3Q15166 354 aa19.38■□□□□ 0.69
NECAB3-221ENST00000607055 SEC23BQ15437 767 aa19.38■□□□□ 0.69
NECAB3-221ENST00000607055 EXOC3L2Q2M3D2 409 aa19.38■□□□□ 0.69
NECAB3-221ENST00000607055 EIF2S3LQ2VIR3 472 aaKnown RBP19.38■□□□□ 0.69
NECAB3-221ENST00000607055 FAM69AQ5T7M9 428 aa19.38■□□□□ 0.69
NECAB3-221ENST00000607055 RPTNQ6XPR3 784 aa19.38■□□□□ 0.69
NECAB3-221ENST00000607055 RRM2BQ7LG56 351 aa19.38■□□□□ 0.69
NECAB3-221ENST00000607055 NRMQ8IXM6 262 aa19.38■□□□□ 0.69
NECAB3-221ENST00000607055 MFSD8Q8NHS3 518 aa19.38■□□□□ 0.69
NECAB3-221ENST00000607055 CPNE4Q96A23 557 aaPredicted RBP19.38■□□□□ 0.69
NECAB3-221ENST00000607055 ALPK1Q96QP1 1244 aa19.38■□□□□ 0.69
NECAB3-221ENST00000607055 KLHL4Q9C0H6 718 aa19.38■□□□□ 0.69
NECAB3-221ENST00000607055 TMCC3Q9ULS5 477 aa19.38■□□□□ 0.69
NECAB3-221ENST00000607055 SAMHD1Q9Y3Z3 626 aaKnown RBP19.38■□□□□ 0.69
NECAB3-221ENST00000607055 FAM215AQ9Y5M1 114 aa19.38■□□□□ 0.69
NECAB3-221ENST00000607055 LYVE1Q9Y5Y7 322 aa19.38■□□□□ 0.69
NECAB3-221ENST00000607055 U3KQV3 271 aa19.38■□□□□ 0.69
NECAB3-221ENST00000607055 IGHV3-15A0A0B4J1V0 119 aa19.37■□□□□ 0.69
NECAB3-221ENST00000607055 LRRN3E7EW58 273 aa19.37■□□□□ 0.69
NECAB3-221ENST00000607055 HNRNPRO43390 633 aaKnown RBP19.37■□□□□ 0.69
NECAB3-221ENST00000607055 OR2T1O43869 369 aa19.37■□□□□ 0.69
NECAB3-221ENST00000607055 CH25HO95992 272 aa19.37■□□□□ 0.69
NECAB3-221ENST00000607055 STSP08842 583 aa19.37■□□□□ 0.69
NECAB3-221ENST00000607055 CA7P43166 264 aa19.37■□□□□ 0.69
NECAB3-221ENST00000607055 SLC35A1P78382 337 aa19.37■□□□□ 0.69
NECAB3-221ENST00000607055 ZNF239Q16600 458 aaKnown RBP19.37■□□□□ 0.69
NECAB3-221ENST00000607055 RTL6Q6ICC9 239 aa19.37■□□□□ 0.69
NECAB3-221ENST00000607055 ZFP1Q6P2D0 407 aa19.37■□□□□ 0.69
NECAB3-221ENST00000607055 MBOAT2Q6ZWT7 520 aa19.37■□□□□ 0.69
NECAB3-221ENST00000607055 ADGRE4PQ86SQ3 457 aa19.37■□□□□ 0.69
NECAB3-221ENST00000607055 RPRMLQ8N4K4 120 aa19.37■□□□□ 0.69
NECAB3-221ENST00000607055 PRR7Q8TB68 274 aa19.37■□□□□ 0.69
NECAB3-221ENST00000607055 FNDC9Q8TBE3 224 aa19.37■□□□□ 0.69
NECAB3-221ENST00000607055 ROBO4Q8WZ75 1007 aa19.37■□□□□ 0.69
NECAB3-221ENST00000607055 STMN2Q93045 179 aa19.37■□□□□ 0.69
NECAB3-221ENST00000607055 ZHX1-C8orf76Q96EF9 292 aa19.37■□□□□ 0.69
NECAB3-221ENST00000607055 FUZQ9BT04 418 aa19.37■□□□□ 0.69
NECAB3-221ENST00000607055 PRRG4Q9BZD6 226 aa19.37■□□□□ 0.69
NECAB3-221ENST00000607055 C20orf141Q9NUB4 165 aa19.37■□□□□ 0.69
NECAB3-221ENST00000607055 CLCF1Q9UBD9 225 aa19.37■□□□□ 0.69
NECAB3-221ENST00000607055 DNAJB9Q9UBS3 223 aa19.37■□□□□ 0.69
NECAB3-221ENST00000607055 MCTS1Q9ULC4 181 aaKnown RBP19.37■□□□□ 0.69
NECAB3-221ENST00000607055 SMG1Q96Q15 3661 aaKnown RBP19.37■□□□□ 0.69
NECAB3-221ENST00000607055 SH3PXD2BA1X283 911 aa19.36■□□□□ 0.69
NECAB3-221ENST00000607055 SLC22A20A6NK97 555 aa19.36■□□□□ 0.69
NECAB3-221ENST00000607055 FTCDNL1E5RQL4 147 aa19.36■□□□□ 0.69
NECAB3-221ENST00000607055 H3BNX3 289 aa19.36■□□□□ 0.69
NECAB3-221ENST00000607055 CLOCKO15516 846 aa19.36■□□□□ 0.69
NECAB3-221ENST00000607055 DEAF1O75398 565 aaPredicted RBP19.36■□□□□ 0.69
NECAB3-221ENST00000607055 LDLRP01130 860 aa19.36■□□□□ 0.69
NECAB3-221ENST00000607055 BGLAPP02818 100 aa19.36■□□□□ 0.69
NECAB3-221ENST00000607055 HOXD4P09016 255 aaPredicted RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms