RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 PRPF19Q9UMS4 504 aaKnown RBP2.53□□□□□ -2
RNU6-88P-201ENST00000606801 V9GY05 133 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 PINLYPA6NC86 204 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 MBTPS2O43462 519 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 FAM189A1O60320 539 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 OPN1MWP04001 364 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 OPN1MW2P0DN77 364 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 OPN1MW3P0DN78 364 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 NR2C1P13056 603 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 NCK1P16333 377 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 ATP6V1B2P21281 511 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 COX7A1P24310 79 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 CXCR2P25025 360 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 HTR1FP30939 366 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 CALCRP30988 508 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 NUDT1P36639 197 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 QARSP47897 775 aaKnown RBP2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 EFNB2P52799 333 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 SPIBQ01892 262 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 MESDQ14696 234 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 SLC15A2Q16348 729 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 KRTAP13-3Q3SY46 172 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 ANKDD1AQ495B1 522 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 SFT2D3Q587I9 215 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 C1orf100Q5SVJ3 147 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 LCE3AQ5TA76 89 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 OR4F3Q6IEY1 312 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 Q6ZVH6 145 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 MFSD6LQ8IWD5 586 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 FTMTQ8N4E7 242 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 ZNF433Q8N7K0 673 aaPredicted RBP2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 DNAJA4Q8WW22 397 aaPredicted RBP2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 HTR3CQ8WXA8 447 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 RDH5Q92781 318 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 FAM104AQ969W3 186 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 EFHD2Q96C19 240 aaPredicted RBP2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 TRIM44Q96DX7 344 aaPredicted RBP2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 PAGE5Q96GU1 130 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 ZNF285Q96NJ3 590 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 MTMR9Q96QG7 549 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 HOXC10Q9NYD6 342 aa2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 MRPS7Q9Y2R9 242 aaKnown RBP2.52□□□□□ -2.01
RNU6-88P-201ENST00000606801 TRAV26-1A0A087WT03 109 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 E9PBE3 544 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 F5H6K3 240 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 H0YCG3 227 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 AP2A1O95782 977 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 PRG2P13727 222 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 ZNF44P15621 663 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 SHMT2P34897 504 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 KIR2DS4P43632 304 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 PRPS1P60891 318 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 KLRC3Q07444 240 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 RIPK1Q13546 671 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 CAPRIN1Q14444 709 aaKnown RBP2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 CFAP157Q5JU67 520 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 PAGE3Q5JUK9 113 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 ATAD3BQ5T9A4 648 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 CTRB2Q6GPI1 263 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 ACP7Q6ZNF0 438 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 RALGPS2Q86X27 583 aaPredicted RBP2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 SLC35F2Q8IXU6 374 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 PNKDQ8N490 385 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 MFSD9Q8NBP5 474 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 OR52H1Q8NGJ2 320 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 OR51S1Q8NGJ8 323 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 FAM110BQ8TC76 370 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 UBE2E3Q969T4 207 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 CMTM7Q96FZ5 175 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 TIMD4Q96H15 378 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 SLC38A2Q96QD8 506 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 MBOAT4Q96T53 435 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 RNF2Q99496 336 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 NRTNQ99748 197 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 MRPL45Q9BRJ2 306 aaKnown RBP2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 YY1AP1Q9H869 796 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 TP53TG5Q9Y2B4 290 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 SLCO1B1Q9Y6L6 691 aa2.51□□□□□ -2.01
RNU6-88P-201ENST00000606801 RPAP1Q9BWH6 1393 aaPredicted RBP2.5□□□□□ -2.01
RNU6-88P-201ENST00000606801 KIR2DL5BA0A0G2JN68 375 aa2.5□□□□□ -2.01
RNU6-88P-201ENST00000606801 KIR2DL5BA0A0G2JPC4 375 aa2.5□□□□□ -2.01
RNU6-88P-201ENST00000606801 HELTA6NFD8 242 aa2.5□□□□□ -2.01
RNU6-88P-201ENST00000606801 HSD17B6O14756 317 aa2.5□□□□□ -2.01
RNU6-88P-201ENST00000606801 RGS16O15492 202 aaPredicted RBP2.5□□□□□ -2.01
RNU6-88P-201ENST00000606801 RAMP3O60896 148 aa2.5□□□□□ -2.01
RNU6-88P-201ENST00000606801 N4BP1O75113 896 aaKnown RBP2.5□□□□□ -2.01
RNU6-88P-201ENST00000606801 ATP5LO75964 103 aa2.5□□□□□ -2.01
RNU6-88P-201ENST00000606801 MOSP00540 346 aa2.5□□□□□ -2.01
RNU6-88P-201ENST00000606801 CHTF8P0CG12 524 aa2.5□□□□□ -2.01
RNU6-88P-201ENST00000606801 RCC1P18754 421 aaPredicted RBP2.5□□□□□ -2.01
RNU6-88P-201ENST00000606801 GLRA2P23416 452 aa2.5□□□□□ -2.01
RNU6-88P-201ENST00000606801 HMGB2P26583 209 aaKnown RBP2.5□□□□□ -2.01
RNU6-88P-201ENST00000606801 BTCP35070 178 aa2.5□□□□□ -2.01
RNU6-88P-201ENST00000606801 RFC4P35249 363 aa2.5□□□□□ -2.01
RNU6-88P-201ENST00000606801 GRIA1P42261 906 aa2.5□□□□□ -2.01
RNU6-88P-201ENST00000606801 HNMTP50135 292 aa2.5□□□□□ -2.01
RNU6-88P-201ENST00000606801 DUSP3P51452 185 aaPredicted RBP2.5□□□□□ -2.01
RNU6-88P-201ENST00000606801 TIMM10P62072 90 aa2.5□□□□□ -2.01
RNU6-88P-201ENST00000606801 NSDHLQ15738 373 aa2.5□□□□□ -2.01
RNU6-88P-201ENST00000606801 DUSP7Q16829 419 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms