RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 SLC17A1Q14916 467 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 COX20Q5RI15 118 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 MRPL2Q5T653 305 aaKnown RBP11.54□□□□□ -0.56
RPS28-204ENST00000602140 TSPO2Q5TGU0 170 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 OGFOD2Q6N063 350 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 WDR93Q6P2C0 686 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 PODNL1Q6PEZ8 512 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 ZNF621Q6ZSS3 439 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 KIRREL3Q8IZU9 778 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 ZNF525Q8N782 197 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 TRIML2Q8N7C3 387 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 PNPT1Q8TCS8 783 aaKnown RBP11.54□□□□□ -0.56
RPS28-204ENST00000602140 OR52E6Q96RD3 313 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 REPIN1Q9BWE0 567 aaKnown RBP11.54□□□□□ -0.56
RPS28-204ENST00000602140 AMBRA1Q9C0C7 1298 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 MTHFD2LQ9H903 347 aaPredicted RBP11.54□□□□□ -0.56
RPS28-204ENST00000602140 SSU72Q9NP77 194 aaKnown RBP11.54□□□□□ -0.56
RPS28-204ENST00000602140 SLC17A5Q9NRA2 495 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 DCTN4Q9UJW0 460 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 ATP23Q9Y6H3 246 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 CUBNO60494 3623 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 RTTNQ86VV8 2226 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 CFAP73A6NFT4 308 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 RNF212BA8MTL3 300 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 FAAHO00519 579 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 PGRP06401 933 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 NR2F1P10589 423 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 UQCRBP14927 111 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 RPS4Y1P22090 263 aaKnown RBP11.53□□□□□ -0.56
RPS28-204ENST00000602140 IL12AP29459 219 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 MAP2K6P52564 334 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 SLC25A3Q00325 362 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 TGFBR3Q03167 851 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 EPS8Q12929 822 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 GNA13Q14344 377 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 TMEM249Q2WGJ8 235 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 CHRFAM7AQ494W8 412 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 OTUD3Q5T2D3 398 aaPredicted RBP11.53□□□□□ -0.56
RPS28-204ENST00000602140 C6orf52Q5T4I8 152 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 ZNF544Q6NX49 715 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 PAQR6Q6TCH4 344 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 C17orf78Q8N4C9 275 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 MREGQ8N565 214 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 TMEM99Q8N816 258 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 C1orf162Q8NEQ5 155 aaPredicted RBP11.53□□□□□ -0.56
RPS28-204ENST00000602140 ZBTB9Q96C00 473 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 TNFRSF13CQ96RJ3 184 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 FKRPQ9H9S5 495 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 KCNK9Q9NPC2 374 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 AIG1Q9NVV5 245 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.53□□□□□ -0.56
RPS28-204ENST00000602140 AMDHD2Q9Y303 409 aa11.53□□□□□ -0.56
RPS28-204ENST00000602140 V9GYY5 206 aaPredicted RBP11.53□□□□□ -0.56
RPS28-204ENST00000602140 ELOA3DA6NLF2 546 aaPredicted RBP11.52□□□□□ -0.57
RPS28-204ENST00000602140 H7C417 338 aa11.52□□□□□ -0.57
RPS28-204ENST00000602140 SDHDO14521 159 aa11.52□□□□□ -0.57
RPS28-204ENST00000602140 AKR7A3O95154 331 aa11.52□□□□□ -0.57
RPS28-204ENST00000602140 DBIP07108 87 aaKnown RBP11.52□□□□□ -0.57
RPS28-204ENST00000602140 GKN3PP0CG01 181 aa11.52□□□□□ -0.57
RPS28-204ENST00000602140 CDH2P19022 906 aaPredicted RBP11.52□□□□□ -0.57
RPS28-204ENST00000602140 CXCR1P25024 350 aa11.52□□□□□ -0.57
RPS28-204ENST00000602140 MPGP29372 298 aa11.52□□□□□ -0.57
RPS28-204ENST00000602140 TXNL4AP83876 142 aaKnown RBP11.52□□□□□ -0.57
RPS28-204ENST00000602140 LOXL1Q08397 574 aaPredicted RBP11.52□□□□□ -0.57
RPS28-204ENST00000602140 BST1Q10588 318 aa11.52□□□□□ -0.57
RPS28-204ENST00000602140 CEACAM7Q14002 265 aa11.52□□□□□ -0.57
RPS28-204ENST00000602140 OR7A5Q15622 319 aa11.52□□□□□ -0.57
RPS28-204ENST00000602140 ELOA3BQ3SY89 546 aa11.52□□□□□ -0.57
RPS28-204ENST00000602140 SPATA19Q7Z5L4 167 aa11.52□□□□□ -0.57
RPS28-204ENST00000602140 PEX5LQ8IYB4 626 aa11.52□□□□□ -0.57
RPS28-204ENST00000602140 ZIC4Q8N9L1 334 aa11.52□□□□□ -0.57
RPS28-204ENST00000602140 ELOA3Q8NG57 546 aa11.52□□□□□ -0.57
RPS28-204ENST00000602140 OR9K2Q8NGE7 335 aa11.52□□□□□ -0.57
RPS28-204ENST00000602140 FAM168AQ92567 244 aa11.52□□□□□ -0.57
RPS28-204ENST00000602140 TMEM45BQ96B21 275 aa11.52□□□□□ -0.57
RPS28-204ENST00000602140 ZNF385AQ96PM9 386 aaKnown RBP11.52□□□□□ -0.57
RPS28-204ENST00000602140 PAIP2Q9BPZ3 127 aaKnown RBP11.52□□□□□ -0.57
RPS28-204ENST00000602140 ADAM19Q9H013 955 aa11.52□□□□□ -0.57
RPS28-204ENST00000602140 CENPHQ9H3R5 247 aa11.52□□□□□ -0.57
RPS28-204ENST00000602140 MANSC1Q9H8J5 431 aa11.52□□□□□ -0.57
RPS28-204ENST00000602140 RLIMQ9NVW2 624 aa11.52□□□□□ -0.57
RPS28-204ENST00000602140 GPR45Q9Y5Y3 372 aa11.52□□□□□ -0.57
RPS28-204ENST00000602140 ALPK2Q86TB3 2170 aa11.52□□□□□ -0.57
RPS28-204ENST00000602140 PLCE1Q9P212 2302 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 LIPT2A6NK58 231 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 ATP6V1G2-DDX39BF2Z307 99 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 RFXANKO14593 260 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 GPIP06744 558 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 BMP4P12644 408 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 SLC25A16P16260 332 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 EPHA3P29320 983 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 APOBEC3AP31941 199 aaPredicted RBP11.51□□□□□ -0.57
RPS28-204ENST00000602140 PRPS1P60891 318 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 VLDLRP98155 873 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 CHRNB3Q05901 458 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 LRRC74AQ0VAA2 488 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 BNIP2Q12982 314 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 MAPK11Q15759 364 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 GSTA3Q16772 222 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 HIKESHIQ53FT3 197 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms