RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 ABCA12Q86UK0 2595 aa14.99□□□□□ -0.01
TRIM28-215ENST00000601150 CCT8L1PA6NM43 557 aa14.99□□□□□ -0.01
TRIM28-215ENST00000601150 ZNF724A8MTY0 619 aa14.99□□□□□ -0.01
TRIM28-215ENST00000601150 M0R3H8 397 aa14.99□□□□□ -0.01
TRIM28-215ENST00000601150 GPIP06744 558 aa14.99□□□□□ -0.01
TRIM28-215ENST00000601150 PNMTP11086 282 aa14.99□□□□□ -0.01
TRIM28-215ENST00000601150 CD247P20963 164 aa14.99□□□□□ -0.01
TRIM28-215ENST00000601150 FPR1P21462 350 aa14.99□□□□□ -0.01
TRIM28-215ENST00000601150 NUDT2P50583 147 aa14.99□□□□□ -0.01
TRIM28-215ENST00000601150 NRF1Q16656 503 aa14.99□□□□□ -0.01
TRIM28-215ENST00000601150 ALG10BQ5I7T1 473 aa14.99□□□□□ -0.01
TRIM28-215ENST00000601150 C1orf140Q5VVS0 124 aa14.99□□□□□ -0.01
TRIM28-215ENST00000601150 FAM91A1Q658Y4 838 aa14.99□□□□□ -0.01
TRIM28-215ENST00000601150 ULK3Q6PHR2 472 aa14.99□□□□□ -0.01
TRIM28-215ENST00000601150 BEND4Q6ZU67 534 aa14.99□□□□□ -0.01
TRIM28-215ENST00000601150 LSRQ86X29 649 aaPredicted RBP14.99□□□□□ -0.01
TRIM28-215ENST00000601150 OR2T12Q8NG77 320 aa14.99□□□□□ -0.01
TRIM28-215ENST00000601150 LINC01560Q8TB33 94 aa14.99□□□□□ -0.01
TRIM28-215ENST00000601150 ZNF300Q96RE9 604 aaPredicted RBP14.99□□□□□ -0.01
TRIM28-215ENST00000601150 TMEM27Q9HBJ8 222 aa14.99□□□□□ -0.01
TRIM28-215ENST00000601150 CMTM6Q9NX76 183 aa14.99□□□□□ -0.01
TRIM28-215ENST00000601150 SELENONQ9NZV5 590 aa14.99□□□□□ -0.01
TRIM28-215ENST00000601150 EMC3Q9P0I2 261 aa14.99□□□□□ -0.01
TRIM28-215ENST00000601150 NDRG3Q9UGV2 375 aa14.99□□□□□ -0.01
TRIM28-215ENST00000601150 IGKV3D-15A0A087WSY6 115 aa14.98□□□□□ -0.01
TRIM28-215ENST00000601150 ELOVL7A1L3X0 281 aa14.98□□□□□ -0.01
TRIM28-215ENST00000601150 SH3D21A4FU49 640 aa14.98□□□□□ -0.01
TRIM28-215ENST00000601150 LIPT2A6NK58 231 aa14.98□□□□□ -0.01
TRIM28-215ENST00000601150 C16orf97H3BN30 126 aa14.98□□□□□ -0.01
TRIM28-215ENST00000601150 FMO6PO60774 539 aa14.98□□□□□ -0.01
TRIM28-215ENST00000601150 DCTN3O75935 186 aa14.98□□□□□ -0.01
TRIM28-215ENST00000601150 AHSA1O95433 338 aa14.98□□□□□ -0.01
TRIM28-215ENST00000601150 IFNA14P01570 189 aa14.98□□□□□ -0.01
TRIM28-215ENST00000601150 EPXP11678 715 aa14.98□□□□□ -0.01
TRIM28-215ENST00000601150 UGT2B10P36537 528 aa14.98□□□□□ -0.01
TRIM28-215ENST00000601150 CRYBA2P53672 197 aa14.98□□□□□ -0.01
TRIM28-215ENST00000601150 H3F3AP84243 136 aa14.98□□□□□ -0.01
TRIM28-215ENST00000601150 CEACAM7Q14002 265 aa14.98□□□□□ -0.01
TRIM28-215ENST00000601150 OR1Q1Q15612 314 aa14.98□□□□□ -0.01
TRIM28-215ENST00000601150 OR7A5Q15622 319 aa14.98□□□□□ -0.01
TRIM28-215ENST00000601150 C8orf82Q6P1X6 216 aaPredicted RBP14.98□□□□□ -0.01
TRIM28-215ENST00000601150 PAQR6Q6TCH4 344 aa14.98□□□□□ -0.01
TRIM28-215ENST00000601150 SLC15A3Q8IY34 581 aa14.98□□□□□ -0.01
TRIM28-215ENST00000601150 MICU2Q8IYU8 434 aa14.98□□□□□ -0.01
TRIM28-215ENST00000601150 SLC47A1Q96FL8 570 aa14.98□□□□□ -0.01
TRIM28-215ENST00000601150 DACH2Q96NX9 599 aa14.98□□□□□ -0.01
TRIM28-215ENST00000601150 MCHR1Q99705 422 aa14.98□□□□□ -0.01
TRIM28-215ENST00000601150 WFDC6Q9BQY6 131 aa14.98□□□□□ -0.01
TRIM28-215ENST00000601150 TAPBPLQ9BX59 468 aa14.98□□□□□ -0.01
TRIM28-215ENST00000601150 FREM1Q5H8C1 2179 aa14.98□□□□□ -0.01
TRIM28-215ENST00000601150 ZNF716A6NP11 495 aa14.97□□□□□ -0.01
TRIM28-215ENST00000601150 ZNF814B7Z6K7 855 aa14.97□□□□□ -0.01
TRIM28-215ENST00000601150 NDUFAB1O14561 156 aa14.97□□□□□ -0.01
TRIM28-215ENST00000601150 GPR171O14626 319 aa14.97□□□□□ -0.01
TRIM28-215ENST00000601150 TPST2O60704 377 aa14.97□□□□□ -0.01
TRIM28-215ENST00000601150 NPIPB7O75200 414 aa14.97□□□□□ -0.01
TRIM28-215ENST00000601150 OR3A2P47893 321 aa14.97□□□□□ -0.01
TRIM28-215ENST00000601150 SLC7A2P52569 658 aa14.97□□□□□ -0.01
TRIM28-215ENST00000601150 SLC16A1P53985 500 aa14.97□□□□□ -0.01
TRIM28-215ENST00000601150 LIPEQ05469 1076 aa14.97□□□□□ -0.01
TRIM28-215ENST00000601150 DAZAP2Q15038 168 aaPredicted RBP14.97□□□□□ -0.01
TRIM28-215ENST00000601150 OTUD3Q5T2D3 398 aaPredicted RBP14.97□□□□□ -0.01
TRIM28-215ENST00000601150 C5orf46Q6UWT4 87 aa14.97□□□□□ -0.01
TRIM28-215ENST00000601150 TFAP2EQ6VUC0 442 aa14.97□□□□□ -0.01
TRIM28-215ENST00000601150 GALNT5Q7Z7M9 940 aa14.97□□□□□ -0.01
TRIM28-215ENST00000601150 CCDC103Q8IW40 242 aa14.97□□□□□ -0.01
TRIM28-215ENST00000601150 OR6T1Q8NGN1 323 aa14.97□□□□□ -0.01
TRIM28-215ENST00000601150 RNF217Q8TC41 542 aa14.97□□□□□ -0.01
TRIM28-215ENST00000601150 PROX1Q92786 737 aa14.97□□□□□ -0.01
TRIM28-215ENST00000601150 SLC38A4Q969I6 547 aa14.97□□□□□ -0.01
TRIM28-215ENST00000601150 ZNF775Q96BV0 537 aaPredicted RBP14.97□□□□□ -0.01
TRIM28-215ENST00000601150 LRRC37BQ96QE4 947 aa14.97□□□□□ -0.01
TRIM28-215ENST00000601150 CCT8L2Q96SF2 557 aa14.97□□□□□ -0.01
TRIM28-215ENST00000601150 KLHL4Q9C0H6 718 aa14.97□□□□□ -0.01
TRIM28-215ENST00000601150 ADPRHL2Q9NX46 363 aa14.97□□□□□ -0.01
TRIM28-215ENST00000601150 FAM53CQ9NYF3 392 aa14.97□□□□□ -0.01
TRIM28-215ENST00000601150 TESMINQ9Y4I5 508 aa14.97□□□□□ -0.01
TRIM28-215ENST00000601150 FBN2P35556 2912 aa14.96□□□□□ -0.01
TRIM28-215ENST00000601150 A0A0B4J2E0 115 aa14.96□□□□□ -0.01
TRIM28-215ENST00000601150 A0A1B0GX12 115 aa14.96□□□□□ -0.01
TRIM28-215ENST00000601150 A6NNC1 897 aa14.96□□□□□ -0.01
TRIM28-215ENST00000601150 NME4O00746 187 aa14.96□□□□□ -0.01
TRIM28-215ENST00000601150 RAMP1O60894 148 aa14.96□□□□□ -0.01
TRIM28-215ENST00000601150 AKR7A3O95154 331 aa14.96□□□□□ -0.01
TRIM28-215ENST00000601150 CCKARP32238 428 aa14.96□□□□□ -0.01
TRIM28-215ENST00000601150 KDELR2P33947 212 aa14.96□□□□□ -0.01
TRIM28-215ENST00000601150 EGR4Q05215 589 aa14.96□□□□□ -0.01
TRIM28-215ENST00000601150 NPTX1Q15818 432 aa14.96□□□□□ -0.01
TRIM28-215ENST00000601150 SWT1Q5T5J6 900 aaKnown RBP14.96□□□□□ -0.01
TRIM28-215ENST00000601150 ZNF613Q6PF04 617 aa14.96□□□□□ -0.01
TRIM28-215ENST00000601150 TMEM200AQ86VY9 491 aa14.96□□□□□ -0.01
TRIM28-215ENST00000601150 ANKS4BQ8N8V4 417 aa14.96□□□□□ -0.01
TRIM28-215ENST00000601150 OR4D11Q8NGI4 311 aa14.96□□□□□ -0.01
TRIM28-215ENST00000601150 MFSD8Q8NHS3 518 aa14.96□□□□□ -0.01
TRIM28-215ENST00000601150 VANGL1Q8TAA9 524 aaPredicted RBP14.96□□□□□ -0.01
TRIM28-215ENST00000601150 LURAP1Q96LR2 239 aa14.96□□□□□ -0.01
TRIM28-215ENST00000601150 BAG5Q9UL15 447 aa14.96□□□□□ -0.01
TRIM28-215ENST00000601150 SLC9A8Q9Y2E8 581 aa14.96□□□□□ -0.01
TRIM28-215ENST00000601150 NOSIPQ9Y314 301 aaKnown RBP14.96□□□□□ -0.01
TRIM28-215ENST00000601150 NOTCH2Q04721 2471 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms