RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 SPATA5L1Q9BVQ7 753 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 PRRG4Q9BZD6 226 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 PLEKHF2Q9H8W4 249 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 CLEC4AQ9UMR7 237 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 EMC9Q9Y3B6 208 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 SPIN1Q9Y657 262 aaPredicted RBP7.8□□□□□ -1.16
SSBP4-208ENST00000600628 ZFHX3Q15911 3703 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 MTORP42345 2549 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 FLNAP21333 2647 aaKnown RBP7.79□□□□□ -1.16
SSBP4-208ENST00000600628 IGHV3-15A0A0B4J1V0 119 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 A0A0B4J2E0 115 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 LOC102725191A0A1B0GVB3 256 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 A0A1B0GWA3 101 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 A0A1B0GX12 115 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 SH3D21A4FU49 640 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 A8MVM7 634 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 C16orf97H3BN30 126 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 EIF1BO60739 113 aaKnown RBP7.79□□□□□ -1.16
SSBP4-208ENST00000600628 SMNDC1O75940 238 aaKnown RBP eCLIP7.79□□□□□ -1.161e-6■■■■□ 19.3
SSBP4-208ENST00000600628 HRGP04196 525 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 THY1P04216 161 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 CRYGSP22914 178 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 SIRPAP78324 504 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 RASGEF1BQ0VAM2 473 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 NFYCQ13952 458 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 CYLC2Q14093 348 aaPredicted RBP7.79□□□□□ -1.16
SSBP4-208ENST00000600628 CAPRIN1Q14444 709 aaKnown RBP7.79□□□□□ -1.16
SSBP4-208ENST00000600628 MAPRE2Q15555 327 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 FXNQ16595 210 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 RABL3Q5HYI8 236 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 SWT1Q5T5J6 900 aaKnown RBP7.79□□□□□ -1.16
SSBP4-208ENST00000600628 Q6ZT83 130 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 BEND4Q6ZU67 534 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 SPATA21Q7Z572 469 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 KRT73Q86Y46 540 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 SLC15A3Q8IY34 581 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 OR4D11Q8NGI4 311 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 OR6S1Q8NH40 331 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 OR10A6Q8NH74 314 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 ZNF563Q8TA94 476 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 IGFBPL1Q8WX77 278 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 DDIT4LQ96D03 193 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 REXO5Q96IC2 774 aaKnown RBP7.79□□□□□ -1.16
SSBP4-208ENST00000600628 ZNF300Q96RE9 604 aaPredicted RBP7.79□□□□□ -1.16
SSBP4-208ENST00000600628 ZNF607Q96SK3 696 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 POLDIP3Q9BY77 421 aaKnown RBP7.79□□□□□ -1.16
SSBP4-208ENST00000600628 AMBRA1Q9C0C7 1298 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 CLEC4MQ9H2X3 399 aaPredicted RBP7.79□□□□□ -1.16
SSBP4-208ENST00000600628 ARMC7Q9H6L4 198 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 ARMCX1Q9P291 453 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.79□□□□□ -1.16
SSBP4-208ENST00000600628 TESQ9UGI8 421 aaKnown RBP7.79□□□□□ -1.16
SSBP4-208ENST00000600628 ITGB1BP2Q9UKP3 347 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 PROCRQ9UNN8 238 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 CAPN7Q9Y6W3 813 aa7.79□□□□□ -1.16
SSBP4-208ENST00000600628 ARID1AO14497 2285 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 ACANP16112 2415 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 A0A087WUJ7 227 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 LOC100653049A0A140TA62 436 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 AQP7P3A6NL99 342 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 C5orf58C9J3I9 102 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 M0QX08 132 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 KLF4O43474 513 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 SERPINB7O75635 380 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 KRT34O76011 436 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 COX4I1P13073 169 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 POU2F1P14859 743 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 UQCRBP14927 111 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 FPR1P21462 350 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 CXCR1P25024 350 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 DNAJA1P31689 397 aaKnown RBP7.78□□□□□ -1.16
SSBP4-208ENST00000600628 CPOXP36551 454 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 CTBP2P56545 445 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 SLC35A1P78382 337 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 HOXC5Q00444 222 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 BNIP2Q12982 314 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 P2RY6Q15077 328 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 POU4F3Q15319 338 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 SFRP5Q5T4F7 317 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 PPP4R4Q6NUP7 873 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 ULK3Q6PHR2 472 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 C5orf46Q6UWT4 87 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 PATL1Q86TB9 770 aaKnown RBP7.78□□□□□ -1.16
SSBP4-208ENST00000600628 CDC20BQ86Y33 519 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 ARMC8Q8IUR7 673 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 CCDC103Q8IW40 242 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 ANKS4BQ8N8V4 417 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 PCYOX1LQ8NBM8 494 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 ATP6V1C2Q8NEY4 427 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 MFSD8Q8NHS3 518 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 PIGXQ8TBF5 258 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 DNAJA4Q8WW22 397 aaPredicted RBP7.78□□□□□ -1.16
SSBP4-208ENST00000600628 NRGNQ92686 78 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 TMEM45BQ96B21 275 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 SLC41A3Q96GZ6 507 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 SH3GL1Q99961 368 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 TMEM204Q9BSN7 226 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 SF3B5Q9BWJ5 86 aaKnown RBP7.78□□□□□ -1.16
SSBP4-208ENST00000600628 PRR14Q9BWN1 585 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 TRIM2Q9C040 744 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms