RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 NR5A2O00482 541 aa13.84□□□□□ -0.19
IRF3-226ENST00000600453 HS3ST1O14792 307 aa13.84□□□□□ -0.19
IRF3-226ENST00000600453 LYZL6O75951 148 aa13.84□□□□□ -0.19
IRF3-226ENST00000600453 VAMP5O95183 116 aa13.84□□□□□ -0.19
IRF3-226ENST00000600453 PGM3O95394 542 aa13.84□□□□□ -0.19
IRF3-226ENST00000600453 PPA1Q15181 289 aa13.84□□□□□ -0.19
IRF3-226ENST00000600453 TSC22D1Q15714 1073 aa13.84□□□□□ -0.19
IRF3-226ENST00000600453 REEP3Q6NUK4 255 aa13.84□□□□□ -0.19
IRF3-226ENST00000600453 CCDC103Q8IW40 242 aa13.84□□□□□ -0.19
IRF3-226ENST00000600453 CLIP4Q8N3C7 705 aa13.84□□□□□ -0.19
IRF3-226ENST00000600453 ZNF433Q8N7K0 673 aaPredicted RBP13.84□□□□□ -0.19
IRF3-226ENST00000600453 EVA1AQ9H8M9 152 aa13.84□□□□□ -0.19
IRF3-226ENST00000600453 RPS6KB2Q9UBS0 482 aa13.84□□□□□ -0.19
IRF3-226ENST00000600453 RNF115Q9Y4L5 304 aa13.84□□□□□ -0.19
IRF3-226ENST00000600453 CCT8L1PA6NM43 557 aa13.83□□□□□ -0.2
IRF3-226ENST00000600453 IMPDH2P12268 514 aa13.83□□□□□ -0.2
IRF3-226ENST00000600453 H2AFXP16104 143 aaPredicted RBP13.83□□□□□ -0.2
IRF3-226ENST00000600453 COX5AP20674 150 aa13.83□□□□□ -0.2
IRF3-226ENST00000600453 IGHV1-2P23083 117 aa13.83□□□□□ -0.2
IRF3-226ENST00000600453 TGFBR3Q03167 851 aa13.83□□□□□ -0.2
IRF3-226ENST00000600453 CEACAM7Q14002 265 aa13.83□□□□□ -0.2
IRF3-226ENST00000600453 STK11Q15831 433 aa13.83□□□□□ -0.2
IRF3-226ENST00000600453 RPS26P11Q5JNZ5 115 aaPredicted RBP13.83□□□□□ -0.2
IRF3-226ENST00000600453 GCNT6Q5T4J0 391 aa13.83□□□□□ -0.2
IRF3-226ENST00000600453 TMEM225Q6GV28 225 aa13.83□□□□□ -0.2
IRF3-226ENST00000600453 WFDC11Q8NEX6 87 aa13.83□□□□□ -0.2
IRF3-226ENST00000600453 STK35Q8TDR2 534 aa13.83□□□□□ -0.2
IRF3-226ENST00000600453 TSPEARQ8WU66 669 aa13.83□□□□□ -0.2
IRF3-226ENST00000600453 RADILQ96JH8 1075 aa13.83□□□□□ -0.2
IRF3-226ENST00000600453 C18orf12Q96KH6 178 aa13.83□□□□□ -0.2
IRF3-226ENST00000600453 ZNF607Q96SK3 696 aa13.83□□□□□ -0.2
IRF3-226ENST00000600453 GSX2Q9BZM3 304 aa13.83□□□□□ -0.2
IRF3-226ENST00000600453 MRGBPQ9NV56 204 aa13.83□□□□□ -0.2
IRF3-226ENST00000600453 TAS2R16Q9NYV7 291 aa13.83□□□□□ -0.2
IRF3-226ENST00000600453 UPB1Q9UBR1 384 aa13.83□□□□□ -0.2
IRF3-226ENST00000600453 PRORSD1PA6NEY8 169 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 LIPT2A6NK58 231 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 OR5H1A6NKK0 313 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 FAM171A2A8MVW0 826 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 SERPINB7O75635 380 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 NUDT7P0C024 238 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 PAX1P15863 534 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 HOXB9P17482 250 aaPredicted RBP13.82□□□□□ -0.2
IRF3-226ENST00000600453 GPX2P18283 190 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 SLC6A2P23975 617 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 PRKAR1BP31321 381 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 CDK6Q00534 326 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 SLC17A1Q14916 467 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 OR7A5Q15622 319 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 PAGE3Q5JUK9 113 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 Q5PR19 223 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 OTUD3Q5T2D3 398 aaPredicted RBP13.82□□□□□ -0.2
IRF3-226ENST00000600453 METTL21CQ5VZV1 264 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 KLHL17Q6TDP4 642 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 C5orf46Q6UWT4 87 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 ABHD12BQ7Z5M8 362 aaPredicted RBP13.82□□□□□ -0.2
IRF3-226ENST00000600453 BIVMQ86UB2 503 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 AKAP1Q92667 903 aaKnown RBP eCLIP13.82□□□□□ -0.2
IRF3-226ENST00000600453 MAL2Q969L2 176 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 FBXW5Q969U6 566 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 DNAJA3Q96EY1 480 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 BDH2Q9BUT1 245 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 TMEM38AQ9H6F2 299 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 C12orf10Q9HB07 376 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 SLC52A3Q9NQ40 469 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 DLL4Q9NR61 685 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 SLC25A37Q9NYZ2 338 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 SLAMF8Q9P0V8 285 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 MALT1Q9UDY8 824 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 LEF1Q9UJU2 399 aaPredicted RBP13.82□□□□□ -0.2
IRF3-226ENST00000600453 MGAT4BQ9UQ53 548 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 NDUFAF1Q9Y375 327 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 FLVCR1Q9Y5Y0 555 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 CADP27708 2225 aa13.82□□□□□ -0.2
IRF3-226ENST00000600453 ZC3H12DA2A288 527 aaKnown RBP13.81□□□□□ -0.2
IRF3-226ENST00000600453 OR6C65A6NJZ3 312 aa13.81□□□□□ -0.2
IRF3-226ENST00000600453 AQP7P3A6NL99 342 aa13.81□□□□□ -0.2
IRF3-226ENST00000600453 CLOCKO15516 846 aa13.81□□□□□ -0.2
IRF3-226ENST00000600453 PLAUP00749 431 aa13.81□□□□□ -0.2
IRF3-226ENST00000600453 ARAFP10398 606 aa13.81□□□□□ -0.2
IRF3-226ENST00000600453 PAX7P23759 505 aa13.81□□□□□ -0.2
IRF3-226ENST00000600453 FAPQ12884 760 aa13.81□□□□□ -0.2
IRF3-226ENST00000600453 C1orf140Q5VVS0 124 aa13.81□□□□□ -0.2
IRF3-226ENST00000600453 CASP12Q6UXS9 341 aa13.81□□□□□ -0.2
IRF3-226ENST00000600453 SERPINA11Q86U17 422 aa13.81□□□□□ -0.2
IRF3-226ENST00000600453 POMGNT2Q8NAT1 580 aa13.81□□□□□ -0.2
IRF3-226ENST00000600453 MFSD8Q8NHS3 518 aa13.81□□□□□ -0.2
IRF3-226ENST00000600453 DNAJA4Q8WW22 397 aaPredicted RBP13.81□□□□□ -0.2
IRF3-226ENST00000600453 TMEM45BQ96B21 275 aa13.81□□□□□ -0.2
IRF3-226ENST00000600453 C3orf49Q96BT1 292 aa13.81□□□□□ -0.2
IRF3-226ENST00000600453 TRMT61AQ96FX7 289 aaKnown RBP13.81□□□□□ -0.2
IRF3-226ENST00000600453 MUS81Q96NY9 551 aa13.81□□□□□ -0.2
IRF3-226ENST00000600453 TRIM2Q9C040 744 aa13.81□□□□□ -0.2
IRF3-226ENST00000600453 FAIMQ9NVQ4 179 aa13.81□□□□□ -0.2
IRF3-226ENST00000600453 VAPAQ9P0L0 249 aa13.81□□□□□ -0.2
IRF3-226ENST00000600453 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.81□□□□□ -0.2
IRF3-226ENST00000600453 DCTN4Q9UJW0 460 aa13.81□□□□□ -0.2
IRF3-226ENST00000600453 SLC13A4Q9UKG4 626 aa13.81□□□□□ -0.2
IRF3-226ENST00000600453 FLNAP21333 2647 aaKnown RBP13.81□□□□□ -0.2
IRF3-226ENST00000600453 RAI1Q7Z5J4 1906 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms