RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 SF3B5Q9BWJ5 86 aaKnown RBP13.94□□□□□ -0.18
VRK3-221ENST00000600284 TRIM2Q9C040 744 aa13.94□□□□□ -0.18
VRK3-221ENST00000600284 CACYBPQ9HB71 228 aaKnown RBP13.94□□□□□ -0.18
VRK3-221ENST00000600284 RLIMQ9NVW2 624 aa13.94□□□□□ -0.18
VRK3-221ENST00000600284 SLC9A8Q9Y2E8 581 aa13.94□□□□□ -0.18
VRK3-221ENST00000600284 PCDHB14Q9Y5E9 798 aa13.94□□□□□ -0.18
VRK3-221ENST00000600284 CIB4A0PJX0 185 aa13.93□□□□□ -0.18
VRK3-221ENST00000600284 RAMP1O60894 148 aa13.93□□□□□ -0.18
VRK3-221ENST00000600284 IDUAP35475 653 aa13.93□□□□□ -0.18
VRK3-221ENST00000600284 STX1BP61266 288 aa13.93□□□□□ -0.18
VRK3-221ENST00000600284 FADDQ13158 208 aa13.93□□□□□ -0.18
VRK3-221ENST00000600284 RGNQ15493 299 aa13.93□□□□□ -0.18
VRK3-221ENST00000600284 OR9I1Q8NGQ6 314 aa13.93□□□□□ -0.18
VRK3-221ENST00000600284 SLC35B4Q969S0 331 aa13.93□□□□□ -0.18
VRK3-221ENST00000600284 DNAJA3Q96EY1 480 aa13.93□□□□□ -0.18
VRK3-221ENST00000600284 TMEM19Q96HH6 336 aa13.93□□□□□ -0.18
VRK3-221ENST00000600284 SPATA9Q9BWV2 254 aa13.93□□□□□ -0.18
VRK3-221ENST00000600284 PAIP1Q9H074 479 aaKnown RBP13.93□□□□□ -0.18
VRK3-221ENST00000600284 BCL2L10Q9HD36 194 aa13.93□□□□□ -0.18
VRK3-221ENST00000600284 TCF7L2Q9NQB0 619 aa13.93□□□□□ -0.18
VRK3-221ENST00000600284 TMEM45AQ9NWC5 275 aa13.93□□□□□ -0.18
VRK3-221ENST00000600284 DCTN4Q9UJW0 460 aa13.93□□□□□ -0.18
VRK3-221ENST00000600284 MGAT4BQ9UQ53 548 aa13.93□□□□□ -0.18
VRK3-221ENST00000600284 ZNF443Q9Y2A4 671 aaPredicted RBP13.93□□□□□ -0.18
VRK3-221ENST00000600284 FLVCR1Q9Y5Y0 555 aa13.93□□□□□ -0.18
VRK3-221ENST00000600284 A0A096LPI6 279 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 A0A1W2PP18 115 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 ZC3H12DA2A288 527 aaKnown RBP13.92□□□□□ -0.18
VRK3-221ENST00000600284 TRIM64A6NGJ6 449 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 TRIM64BA6NI03 449 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 LIPT2A6NK58 231 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 CCT8L1PA6NM43 557 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 A8MVM7 634 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 PDLIM1O00151 329 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 CLIC1O00299 241 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 RAD51DO75771 328 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 LY6G6DO95868 133 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 IGHV3-9P01782 118 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 SOD3P08294 240 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 GKN3PP0CG01 181 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 BMP2P12643 396 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 PTAFRP25105 342 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 IRX1P78414 480 aaPredicted RBP13.92□□□□□ -0.18
VRK3-221ENST00000600284 FAPQ12884 760 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 GABRA6Q16445 453 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 GTDC1Q4AE62 458 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 KLHL17Q6TDP4 642 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 TMEM108Q6UXF1 575 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 ATG4DQ86TL0 474 aaPredicted RBP13.92□□□□□ -0.18
VRK3-221ENST00000600284 KBTBD8Q8NFY9 601 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 LRRC8CQ8TDW0 803 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 TMEM45BQ96B21 275 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 AURKBQ96GD4 344 aaPredicted RBP13.92□□□□□ -0.18
VRK3-221ENST00000600284 CCDC28BQ9BUN5 200 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 AMBRA1Q9C0C7 1298 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 A4GALTQ9NPC4 353 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 FAIMQ9NVQ4 179 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 CISD1Q9NZ45 108 aaKnown RBP13.92□□□□□ -0.18
VRK3-221ENST00000600284 NPAP1Q9NZP6 1156 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 SLC25A15Q9Y619 301 aa13.92□□□□□ -0.18
VRK3-221ENST00000600284 AQP7P3A6NL99 342 aa13.91□□□□□ -0.18
VRK3-221ENST00000600284 SHISA9B4DS77 424 aa13.91□□□□□ -0.18
VRK3-221ENST00000600284 POLR3GO15318 223 aaPredicted RBP13.91□□□□□ -0.18
VRK3-221ENST00000600284 VAMP5O95183 116 aa13.91□□□□□ -0.18
VRK3-221ENST00000600284 TGFBR3Q03167 851 aa13.91□□□□□ -0.18
VRK3-221ENST00000600284 CEACAM7Q14002 265 aa13.91□□□□□ -0.18
VRK3-221ENST00000600284 PGGHGQ32M88 737 aa13.91□□□□□ -0.18
VRK3-221ENST00000600284 ZNF311Q5JNZ3 666 aa13.91□□□□□ -0.18
VRK3-221ENST00000600284 OTUD3Q5T2D3 398 aaPredicted RBP13.91□□□□□ -0.18
VRK3-221ENST00000600284 BLOC1S3Q6QNY0 202 aa13.91□□□□□ -0.18
VRK3-221ENST00000600284 CASP12Q6UXS9 341 aa13.91□□□□□ -0.18
VRK3-221ENST00000600284 Q71RC1 249 aaPredicted RBP13.91□□□□□ -0.18
VRK3-221ENST00000600284 CLIP4Q8N3C7 705 aa13.91□□□□□ -0.18
VRK3-221ENST00000600284 C17orf78Q8N4C9 275 aa13.91□□□□□ -0.18
VRK3-221ENST00000600284 GOLGA6L1Q8N7Z2 621 aa13.91□□□□□ -0.18
VRK3-221ENST00000600284 C1orf162Q8NEQ5 155 aaPredicted RBP13.91□□□□□ -0.18
VRK3-221ENST00000600284 BBS10Q8TAM1 723 aa13.91□□□□□ -0.18
VRK3-221ENST00000600284 NEUROG1Q92886 237 aa13.91□□□□□ -0.18
VRK3-221ENST00000600284 GTPBP3Q969Y2 492 aaKnown RBP13.91□□□□□ -0.18
VRK3-221ENST00000600284 TAPBPLQ9BX59 468 aa13.91□□□□□ -0.18
VRK3-221ENST00000600284 UPB1Q9UBR1 384 aa13.91□□□□□ -0.18
VRK3-221ENST00000600284 CHST2Q9Y4C5 530 aa13.91□□□□□ -0.18
VRK3-221ENST00000600284 MAGED1Q9Y5V3 778 aaPredicted RBP13.91□□□□□ -0.18
VRK3-221ENST00000600284 GMEB1Q9Y692 573 aa13.91□□□□□ -0.18
VRK3-221ENST00000600284 USF3Q68DE3 2245 aa13.91□□□□□ -0.18
VRK3-221ENST00000600284 ABCD4O14678 606 aa13.9□□□□□ -0.18
VRK3-221ENST00000600284 SMAD7O15105 426 aaKnown RBP13.9□□□□□ -0.18
VRK3-221ENST00000600284 ITGA5P08648 1049 aa13.9□□□□□ -0.18
VRK3-221ENST00000600284 ETS2P15036 469 aa13.9□□□□□ -0.18
VRK3-221ENST00000600284 HOXB9P17482 250 aaPredicted RBP13.9□□□□□ -0.18
VRK3-221ENST00000600284 NCF2P19878 526 aaPredicted RBP13.9□□□□□ -0.18
VRK3-221ENST00000600284 IDH3AP50213 366 aa13.9□□□□□ -0.18
VRK3-221ENST00000600284 OR7A5Q15622 319 aa13.9□□□□□ -0.18
VRK3-221ENST00000600284 RPS26P11Q5JNZ5 115 aaPredicted RBP13.9□□□□□ -0.18
VRK3-221ENST00000600284 LRIF1Q5T3J3 769 aa13.9□□□□□ -0.18
VRK3-221ENST00000600284 SLC2A7Q6PXP3 512 aa13.9□□□□□ -0.18
VRK3-221ENST00000600284 DTX2Q86UW9 622 aa13.9□□□□□ -0.18
VRK3-221ENST00000600284 CADM2Q8N3J6 435 aa13.9□□□□□ -0.18
VRK3-221ENST00000600284 TMEM99Q8N816 258 aa13.9□□□□□ -0.18
VRK3-221ENST00000600284 POMGNT2Q8NAT1 580 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms