RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 BHLHA15Q7RTS1 189 aaPredicted RBP12.18□□□□□ -0.46
SCAF1-203ENST00000598359 PEX5LQ8IYB4 626 aa12.18□□□□□ -0.46
SCAF1-203ENST00000598359 POU5F2Q8N7G0 328 aa12.18□□□□□ -0.46
SCAF1-203ENST00000598359 OR52P1PQ8NH57 321 aa12.18□□□□□ -0.46
SCAF1-203ENST00000598359 SLC38A5Q8WUX1 472 aa12.18□□□□□ -0.46
SCAF1-203ENST00000598359 GTF2H4Q92759 462 aa12.18□□□□□ -0.46
SCAF1-203ENST00000598359 KISS1RQ969F8 398 aaPredicted RBP12.18□□□□□ -0.46
SCAF1-203ENST00000598359 PERPQ96FX8 193 aa12.18□□□□□ -0.46
SCAF1-203ENST00000598359 TMEM19Q96HH6 336 aa12.18□□□□□ -0.46
SCAF1-203ENST00000598359 SMR3AQ99954 134 aa12.18□□□□□ -0.46
SCAF1-203ENST00000598359 PAIP1Q9H074 479 aaKnown RBP12.18□□□□□ -0.46
SCAF1-203ENST00000598359 RMND5AQ9H871 391 aa12.18□□□□□ -0.46
SCAF1-203ENST00000598359 RNPEPL1Q9HAU8 725 aa12.18□□□□□ -0.46
SCAF1-203ENST00000598359 NDE1Q9NXR1 346 aa12.18□□□□□ -0.46
SCAF1-203ENST00000598359 PRPF19Q9UMS4 504 aaKnown RBP12.18□□□□□ -0.46
SCAF1-203ENST00000598359 PCDHB14Q9Y5E9 798 aa12.18□□□□□ -0.46
SCAF1-203ENST00000598359 SPIN1Q9Y657 262 aaPredicted RBP12.18□□□□□ -0.46
SCAF1-203ENST00000598359 ZNF716A6NP11 495 aa12.17□□□□□ -0.46
SCAF1-203ENST00000598359 ZNF724A8MTY0 619 aa12.17□□□□□ -0.46
SCAF1-203ENST00000598359 PMS2P2O95744 297 aa12.17□□□□□ -0.46
SCAF1-203ENST00000598359 TFPTP0C1Z6 253 aa12.17□□□□□ -0.46
SCAF1-203ENST00000598359 ZCCHC18P0CG32 403 aa12.17□□□□□ -0.46
SCAF1-203ENST00000598359 IMPDH2P12268 514 aa12.17□□□□□ -0.46
SCAF1-203ENST00000598359 PRG2P13727 222 aa12.17□□□□□ -0.46
SCAF1-203ENST00000598359 FPR1P21462 350 aa12.17□□□□□ -0.46
SCAF1-203ENST00000598359 POLR2HP52434 150 aaKnown RBP12.17□□□□□ -0.46
SCAF1-203ENST00000598359 TXNL4AP83876 142 aaKnown RBP12.17□□□□□ -0.46
SCAF1-203ENST00000598359 MXRA7P84157 204 aa12.17□□□□□ -0.46
SCAF1-203ENST00000598359 CYLC2Q14093 348 aaPredicted RBP12.17□□□□□ -0.46
SCAF1-203ENST00000598359 GNA13Q14344 377 aa12.17□□□□□ -0.46
SCAF1-203ENST00000598359 Q5PR19 223 aa12.17□□□□□ -0.46
SCAF1-203ENST00000598359 Q6ZT83 130 aa12.17□□□□□ -0.46
SCAF1-203ENST00000598359 GALNT5Q7Z7M9 940 aa12.17□□□□□ -0.46
SCAF1-203ENST00000598359 SNX32Q86XE0 403 aa12.17□□□□□ -0.46
SCAF1-203ENST00000598359 FUNDC1Q8IVP5 155 aa12.17□□□□□ -0.46
SCAF1-203ENST00000598359 CMIPQ8IY22 773 aa12.17□□□□□ -0.46
SCAF1-203ENST00000598359 ZNF100Q8IYN0 542 aa12.17□□□□□ -0.46
SCAF1-203ENST00000598359 CLIP4Q8N3C7 705 aa12.17□□□□□ -0.46
SCAF1-203ENST00000598359 NEUROG1Q92886 237 aa12.17□□□□□ -0.46
SCAF1-203ENST00000598359 MAL2Q969L2 176 aa12.17□□□□□ -0.46
SCAF1-203ENST00000598359 TACO1Q9BSH4 297 aaKnown RBP12.17□□□□□ -0.46
SCAF1-203ENST00000598359 SLC7A8Q9UHI5 535 aa12.17□□□□□ -0.46
SCAF1-203ENST00000598359 ZNF443Q9Y2A4 671 aaPredicted RBP12.17□□□□□ -0.46
SCAF1-203ENST00000598359 ROS1P08922 2347 aa12.17□□□□□ -0.46
SCAF1-203ENST00000598359 RAI1Q7Z5J4 1906 aaPredicted RBP12.17□□□□□ -0.46
SCAF1-203ENST00000598359 DSPPQ9NZW4 1301 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 IGKV3D-15A0A087WSY6 115 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 CDHR4A6H8M9 788 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 NR5A2O00482 541 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 CLOCKO15516 846 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 FRS3O43559 492 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 HOXB9P17482 250 aaPredicted RBP12.16□□□□□ -0.46
SCAF1-203ENST00000598359 IGHV1-2P23083 117 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 SLC1A3P43003 542 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 STX1BP61266 288 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 SLC25A3Q00325 362 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 HOXC5Q00444 222 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 BNIP2Q12982 314 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 ITGADQ13349 1161 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 P2RY6Q15077 328 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 LIN52Q52LA3 116 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 C16orf89Q6UX73 402 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 SEZ6L2Q6UXD5 910 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 C20orf204Q6ZNR8 217 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 MSANTD1Q6ZTZ1 278 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 Q71RC1 249 aaPredicted RBP12.16□□□□□ -0.46
SCAF1-203ENST00000598359 P3H2Q8IVL5 708 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 MSRB3Q8IXL7 192 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 UBE2J2Q8N2K1 259 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 C10orf111Q8N326 155 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 CADM2Q8N3J6 435 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 LILRB1Q8NHL6 650 aaPredicted RBP12.16□□□□□ -0.46
SCAF1-203ENST00000598359 AKAP1Q92667 903 aaKnown RBP eCLIP12.16□□□□□ -0.46
SCAF1-203ENST00000598359 PIGTQ969N2 578 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 ZHX1-C8orf76Q96EF9 292 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 TMEM204Q9BSN7 226 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 THTPAQ9BU02 230 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 HDHD5Q9BXW7 423 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 OR10A4Q9H209 315 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 DCLRE1BQ9H816 532 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 TMEM45AQ9NWC5 275 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 SLC25A37Q9NYZ2 338 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 SLAMF8Q9P0V8 285 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 TMEM181Q9P2C4 612 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 NOSIPQ9Y314 301 aaKnown RBP12.16□□□□□ -0.46
SCAF1-203ENST00000598359 HDGFL3Q9Y3E1 203 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 CHST2Q9Y4C5 530 aa12.16□□□□□ -0.46
SCAF1-203ENST00000598359 CLIC1O00299 241 aa12.15□□□□□ -0.46
SCAF1-203ENST00000598359 HS3ST1O14792 307 aa12.15□□□□□ -0.46
SCAF1-203ENST00000598359 CIB2O75838 187 aa12.15□□□□□ -0.46
SCAF1-203ENST00000598359 ACAA2P42765 397 aaKnown RBP12.15□□□□□ -0.46
SCAF1-203ENST00000598359 HTR3AP46098 478 aa12.15□□□□□ -0.46
SCAF1-203ENST00000598359 CRISP3P54108 245 aa12.15□□□□□ -0.46
SCAF1-203ENST00000598359 NR1H2P55055 460 aa12.15□□□□□ -0.46
SCAF1-203ENST00000598359 FOXG1P55316 489 aaPredicted RBP12.15□□□□□ -0.46
SCAF1-203ENST00000598359 ACTR3P61158 418 aa12.15□□□□□ -0.46
SCAF1-203ENST00000598359 KPNB1Q14974 876 aaKnown RBP12.15□□□□□ -0.46
SCAF1-203ENST00000598359 RGNQ15493 299 aa12.15□□□□□ -0.46
SCAF1-203ENST00000598359 PAGE3Q5JUK9 113 aa12.15□□□□□ -0.46
SCAF1-203ENST00000598359 HACD2Q6Y1H2 254 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms