RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 IGFBPL1Q8WX77 278 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 APH1AQ96BI3 265 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 SPATA5L1Q9BVQ7 753 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 SF3B5Q9BWJ5 86 aaKnown RBP9.3□□□□□ -0.92
CCDC9-203ENST00000596938 RSPO3Q9BXY4 272 aaPredicted RBP9.3□□□□□ -0.92
CCDC9-203ENST00000596938 PIF1Q9H611 641 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 ZNF385DQ9H6B1 395 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 ESRP2Q9H6T0 727 aaKnown RBP9.3□□□□□ -0.92
CCDC9-203ENST00000596938 CORO2BQ9UQ03 480 aa9.3□□□□□ -0.92
CCDC9-203ENST00000596938 ZFHX3Q15911 3703 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 NF1P21359 2839 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 ARHGEF9O43307 516 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 RAMP1O60894 148 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 SMPD2O60906 423 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 NPIPB7O75200 414 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 LYZL6O75951 148 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 PAX1P15863 534 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 GGT1P19440 569 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 IDUAP35475 653 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 RIPPLY3P57055 190 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 FOXD4Q12950 439 aaPredicted RBP9.29□□□□□ -0.92
CCDC9-203ENST00000596938 ADRM1Q16186 407 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 RUNDC3AQ59EK9 446 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 GCNT6Q5T4J0 391 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 DHRS4L2Q6PKH6 230 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 PRSS57Q6UWY2 283 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 SEZ6L2Q6UXD5 910 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 ATG4DQ86TL0 474 aaPredicted RBP9.29□□□□□ -0.92
CCDC9-203ENST00000596938 SERPINA11Q86U17 422 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 KRT73Q86Y46 540 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 C10orf111Q8N326 155 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 CADM2Q8N3J6 435 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 ZNF611Q8N823 705 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 LSMEM1Q8N8F7 131 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 C3orf49Q96BT1 292 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 MUCL1Q96DR8 90 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 DNAJA3Q96EY1 480 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 MUS81Q96NY9 551 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 CCL19Q99731 98 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 C12orf10Q9HB07 376 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 DLL4Q9NR61 685 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 ASB6Q9NWX5 421 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 MALT1Q9UDY8 824 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 LEF1Q9UJU2 399 aaPredicted RBP9.29□□□□□ -0.92
CCDC9-203ENST00000596938 DCTN4Q9UJW0 460 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 SLC9A8Q9Y2E8 581 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 NDUFAF1Q9Y375 327 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 FLVCR1Q9Y5Y0 555 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 MTORP42345 2549 aa9.29□□□□□ -0.92
CCDC9-203ENST00000596938 PRORSD1PA6NEY8 169 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 OR5H1A6NKK0 313 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 AQP7P3A6NL99 342 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 TMEM229AB2RXF0 380 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 HS3ST1O14792 307 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 SERPINB7O75635 380 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 VAMP5O95183 116 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 PLAUP00749 431 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 CD3EP07766 207 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 SLC6A2P23975 617 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 ADSLP30566 484 aaPredicted RBP9.28□□□□□ -0.92
CCDC9-203ENST00000596938 BNIP2Q12982 314 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 SCARB2Q14108 478 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 CAPRIN1Q14444 709 aaKnown RBP9.28□□□□□ -0.92
CCDC9-203ENST00000596938 PPA1Q15181 289 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 OR7A5Q15622 319 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 OTUD3Q5T2D3 398 aaPredicted RBP9.28□□□□□ -0.92
CCDC9-203ENST00000596938 C1QTNF12Q5T7M4 302 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 C1orf140Q5VVS0 124 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 OR7E24Q6IFN5 339 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 ALKBH2Q6NS38 261 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 C6orf89Q6UWU4 347 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.28□□□□□ -0.92
CCDC9-203ENST00000596938 KRTAP1-3Q8IUG1 177 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 UBE2J2Q8N2K1 259 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 TMEM99Q8N816 258 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 ZIC4Q8N9L1 334 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 WFDC11Q8NEX6 87 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 BHLHE22Q8NFJ8 381 aaPredicted RBP9.28□□□□□ -0.92
CCDC9-203ENST00000596938 LILRB1Q8NHL6 650 aaPredicted RBP9.28□□□□□ -0.92
CCDC9-203ENST00000596938 MFSD8Q8NHS3 518 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 NFKBIDQ8NI38 313 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 TMEM45BQ96B21 275 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 THOC1Q96FV9 657 aaKnown RBP9.28□□□□□ -0.92
CCDC9-203ENST00000596938 ZNF607Q96SK3 696 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 CPPED1Q9BRF8 314 aaPredicted RBP9.28□□□□□ -0.92
CCDC9-203ENST00000596938 TAPBPLQ9BX59 468 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 GSX2Q9BZM3 304 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 IKZF5Q9H5V7 419 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 EVA1AQ9H8M9 152 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 NPHS2Q9NP85 383 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 MRGBPQ9NV56 204 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 TAS2R16Q9NYV7 291 aa9.28□□□□□ -0.92
CCDC9-203ENST00000596938 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.28□□□□□ -0.92
CCDC9-203ENST00000596938 NIPBLQ6KC79 2804 aaeCLIP9.27□□□□□ -0.92
CCDC9-203ENST00000596938 SETD2Q9BYW2 2564 aaPredicted RBP9.27□□□□□ -0.92
CCDC9-203ENST00000596938 A0A0G2JND7 137 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 CIB4A0PJX0 185 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 DPRXA6NFQ7 191 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 PDLIM1O00151 329 aa9.27□□□□□ -0.93
CCDC9-203ENST00000596938 ANGPT2O15123 496 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms