RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 ARHGDIGQ99819 225 aa15.4■□□□□ 0.06
SHKBP1-212ENST00000596163 PSD2Q9BQI7 771 aa15.4■□□□□ 0.06
SHKBP1-212ENST00000596163 RSPO3Q9BXY4 272 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-212ENST00000596163 ZC3H12DA2A288 527 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-212ENST00000596163 TMEM229AB2RXF0 380 aa15.39■□□□□ 0.05
SHKBP1-212ENST00000596163 GSTA4O15217 222 aa15.39■□□□□ 0.05
SHKBP1-212ENST00000596163 OR2T1O43869 369 aa15.39■□□□□ 0.05
SHKBP1-212ENST00000596163 IMPDH2P12268 514 aa15.39■□□□□ 0.05
SHKBP1-212ENST00000596163 CD247P20963 164 aa15.39■□□□□ 0.05
SHKBP1-212ENST00000596163 FPR1P21462 350 aa15.39■□□□□ 0.05
SHKBP1-212ENST00000596163 KDELR2P33947 212 aa15.39■□□□□ 0.05
SHKBP1-212ENST00000596163 MNAT1P51948 309 aa15.39■□□□□ 0.05
SHKBP1-212ENST00000596163 SLC7A2P52569 658 aa15.39■□□□□ 0.05
SHKBP1-212ENST00000596163 PSME3P61289 254 aa15.39■□□□□ 0.05
SHKBP1-212ENST00000596163 TLE4Q04727 773 aa15.39■□□□□ 0.05
SHKBP1-212ENST00000596163 BNIP2Q12982 314 aa15.39■□□□□ 0.05
SHKBP1-212ENST00000596163 CEACAM7Q14002 265 aa15.39■□□□□ 0.05
SHKBP1-212ENST00000596163 SWT1Q5T5J6 900 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-212ENST00000596163 PAQR6Q6TCH4 344 aa15.39■□□□□ 0.05
SHKBP1-212ENST00000596163 GALNT5Q7Z7M9 940 aa15.39■□□□□ 0.05
SHKBP1-212ENST00000596163 COMTD1Q86VU5 262 aa15.39■□□□□ 0.05
SHKBP1-212ENST00000596163 ZNF295-AS1Q8N0V1 137 aa15.39■□□□□ 0.05
SHKBP1-212ENST00000596163 GPR32P1Q8NGA4 272 aa15.39■□□□□ 0.05
SHKBP1-212ENST00000596163 C12orf49Q9H741 205 aa15.39■□□□□ 0.05
SHKBP1-212ENST00000596163 TAGLN3Q9UI15 199 aa15.39■□□□□ 0.05
SHKBP1-212ENST00000596163 IGKV3D-15A0A087WSY6 115 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 LIPT2A6NK58 231 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 C16orf97H3BN30 126 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 M0R3H8 397 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 CASKO14936 926 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 EPXP11678 715 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 HTR2AP28223 471 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 GTF2E2P29084 291 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 H3F3AP84243 136 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 FAM27E3Q08E93 113 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 OR7A5Q15622 319 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 EXOC3L2Q2M3D2 409 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 ABLIM2Q6H8Q1 611 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 C8orf82Q6P1X6 216 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 ZNF613Q6PF04 617 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 CCDC197Q8NCU1 140 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 MFSD8Q8NHS3 518 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 LZICQ8WZA0 190 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 SLC38A4Q969I6 547 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 DNAJA3Q96EY1 480 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 DACH2Q96NX9 599 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 EPYCQ99645 322 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 ALG2Q9H553 416 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 MCCC2Q9HCC0 563 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 SPAG4Q9NPE6 437 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 NDE1Q9NXR1 346 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 CRIM1Q9NZV1 1036 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 ADAM21Q9UKJ8 722 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 UNC79Q9P2D8 2635 aa15.38■□□□□ 0.05
SHKBP1-212ENST00000596163 A0A0B4J2E0 115 aa15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 A0A1B0GX12 115 aa15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 NPIPB7O75200 414 aa15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 GMNNO75496 209 aa15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 VAMP5O95183 116 aa15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 GOSR1O95249 250 aa15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 PRF1P14222 555 aa15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 SLC16A1P53985 500 aa15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 SNTB1Q13884 538 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 LRRC23Q53EV4 343 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 CYBRD1Q53TN4 286 aa15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 OTUD3Q5T2D3 398 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 NUFIP2Q7Z417 695 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 ZNF100Q8IYN0 542 aa15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 OR6T1Q8NGN1 323 aa15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 VANGL1Q8TAA9 524 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 KCTD14Q9BQ13 255 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 SF3B5Q9BWJ5 86 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 PRR14Q9BWN1 585 aa15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 HDHD5Q9BXW7 423 aa15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 PARPBPQ9NWS1 579 aa15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 ADPRHL2Q9NX46 363 aa15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 USP22Q9UPT9 525 aa15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 NOSIPQ9Y314 301 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 SH3GLB1Q9Y371 365 aa15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 MED12LQ86YW9 2145 aa15.37■□□□□ 0.05
SHKBP1-212ENST00000596163 INTS1Q8N201 2190 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 HCFC1P51610 2035 aa15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 TRAV36DV7A0A075B6V5 113 aa15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 A0A087WUJ7 227 aa15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 NME4O00746 187 aa15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 TPST2O60704 377 aa15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 SHOX2O60902 331 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 PPP3CBP16298 524 aa15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 UGT2B10P36537 528 aa15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 OR3A2P47893 321 aa15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 MFSD13AQ14CX5 517 aa15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 DAZAP2Q15038 168 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 ENTPD8Q5MY95 495 aa15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 TMEM225Q6GV28 225 aa15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 TFAP2EQ6VUC0 442 aa15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 CCDC103Q8IW40 242 aa15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 OR6S1Q8NH40 331 aa15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 LINC01560Q8TB33 94 aa15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 SLC25A36Q96CQ1 311 aa15.36■□□□□ 0.05
SHKBP1-212ENST00000596163 ZNF300Q96RE9 604 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms