RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 XAGE5Q8WWM1 108 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 CNOT9Q92600 299 aaKnown RBP8.68□□□□□ -1.02
LIG1-209ENST00000596104 RAB8BQ92930 207 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 ROPN1LQ96C74 230 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 ZNF385AQ96PM9 386 aaKnown RBP8.68□□□□□ -1.02
LIG1-209ENST00000596104 PPCSQ9HAB8 311 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 OBP2BQ9NPH6 170 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 CA10Q9NS85 328 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 OSGIN1Q9UJX0 560 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 PCDHGB4Q9UN71 923 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 TMED7Q9Y3B3 224 aa8.68□□□□□ -1.02
LIG1-209ENST00000596104 B9A039 149 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 SKAP2O75563 359 aaPredicted RBP8.67□□□□□ -1.02
LIG1-209ENST00000596104 PDE5AO76074 875 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 STAMBPO95630 424 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 AGR2O95994 175 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 TACSTD2P09758 323 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 GIFP27352 417 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 HTR3AP46098 478 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 EFNB3Q15768 340 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 PGS1Q32NB8 556 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 TBRG1Q3YBR2 411 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 IQCCQ4KMZ1 466 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 ATAD3BQ5T9A4 648 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 SAXO2Q658L1 398 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 KLHL24Q6TFL4 600 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 ZCCHC23Q6ZST2 131 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 SLC46A3Q7Z3Q1 461 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 POMGNT2Q8NAT1 580 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 ZNF540Q8NDQ6 660 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 OR9K2Q8NGE7 335 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 OR8J2Q8NGG1 315 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 PMM1Q92871 262 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 TUBGCP3Q96CW5 907 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 DDIT4LQ96D03 193 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 APOPT1Q96IL0 206 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 SLC38A2Q96QD8 506 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 VRK1Q99986 396 aaPredicted RBP8.67□□□□□ -1.02
LIG1-209ENST00000596104 NAA11Q9BSU3 229 aaPredicted RBP8.67□□□□□ -1.02
LIG1-209ENST00000596104 KATNB1Q9BVA0 655 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 PLK3Q9H4B4 646 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.67□□□□□ -1.02
LIG1-209ENST00000596104 ASIC5Q9NY37 505 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 SLC17A7Q9P2U7 560 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 CRNNQ9UBG3 495 aaPredicted RBP8.67□□□□□ -1.02
LIG1-209ENST00000596104 ZDHHC2Q9UIJ5 367 aa8.67□□□□□ -1.02
LIG1-209ENST00000596104 ARFGEF3Q5TH69 2177 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 LIPT2A6NK58 231 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 FAAHO00519 579 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 WIPF1O43516 503 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 TCF21O43680 179 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 LILRA1O75019 489 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 IGLV1-44P01699 117 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 C1QCP02747 245 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 IGFBP1P08833 259 aaPredicted RBP8.66□□□□□ -1.02
LIG1-209ENST00000596104 OR4A8P0C604 315 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 ITGA2P17301 1181 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 CDH2P19022 906 aaPredicted RBP8.66□□□□□ -1.02
LIG1-209ENST00000596104 UQCRC2P22695 453 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 TACR3P29371 465 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 IL2RGP31785 369 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 SERPINB5P36952 375 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 PPOXP50336 477 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 IDH3GP51553 393 aaPredicted RBP8.66□□□□□ -1.02
LIG1-209ENST00000596104 P2RY4P51582 365 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 POLR2HP52434 150 aaKnown RBP8.66□□□□□ -1.02
LIG1-209ENST00000596104 MAP2K6P52564 334 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 NAAAQ02083 359 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 EMX2Q04743 252 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 RUNX1T1Q06455 604 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 OTUD3Q5T2D3 398 aaPredicted RBP8.66□□□□□ -1.02
LIG1-209ENST00000596104 ANKRD16Q6P6B7 361 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 AAED1Q7RTV5 226 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 SPATA19Q7Z5L4 167 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 ANKRD46Q86W74 232 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 CMIPQ8IY22 773 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 TMEM99Q8N816 258 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 OR4A15Q8NGL6 344 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 OR1K1Q8NGR3 316 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 BCL2L2Q92843 193 aaPredicted RBP8.66□□□□□ -1.02
LIG1-209ENST00000596104 NEURL3Q96EH8 262 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 RHOXF2Q9BQY4 288 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 SF3B5Q9BWJ5 86 aaKnown RBP8.66□□□□□ -1.02
LIG1-209ENST00000596104 ADAM19Q9H013 955 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 SLC38A1Q9H2H9 487 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 NELFAQ9H3P2 528 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 PIF1Q9H611 641 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 SEC61A2Q9H9S3 476 aa8.66□□□□□ -1.02
LIG1-209ENST00000596104 ARPC4-TTLL3A0A0A6YYG9 625 aa8.65□□□□□ -1.02
LIG1-209ENST00000596104 PRSS51A0A1B0GVH4 220 aa8.65□□□□□ -1.02
LIG1-209ENST00000596104 AGAP5A6NIR3 686 aa8.65□□□□□ -1.02
LIG1-209ENST00000596104 AQP7P3A6NL99 342 aa8.65□□□□□ -1.02
LIG1-209ENST00000596104 AKR7A3O95154 331 aa8.65□□□□□ -1.02
LIG1-209ENST00000596104 LGI1O95970 557 aa8.65□□□□□ -1.02
LIG1-209ENST00000596104 CRYAAP02489 173 aa8.65□□□□□ -1.02
LIG1-209ENST00000596104 CHRM4P08173 479 aa8.65□□□□□ -1.02
LIG1-209ENST00000596104 CECR9P0C854 216 aa8.65□□□□□ -1.02
LIG1-209ENST00000596104 RPS4Y1P22090 263 aaKnown RBP8.65□□□□□ -1.02
LIG1-209ENST00000596104 CALCRP30988 508 aa8.65□□□□□ -1.02
LIG1-209ENST00000596104 SLC1A3P43003 542 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms