RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 NCDNQ9UBB6 729 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 FBXL4Q9UKA2 621 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 PLEKHM1Q9Y4G2 1056 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 ENTPD2Q9Y5L3 495 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 ETV7Q9Y603 341 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 A0A1B0GWA3 101 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 NKX2-2O95096 273 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 RPS21P63220 83 aaKnown RBP12.18□□□□□ -0.46
VRK3-209ENST00000594948 IL10RAQ13651 578 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 KIR2DS3Q14952 304 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 FBXO42Q6P3S6 717 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 FAM198BQ6UWH4 519 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 DNM1P46Q6ZS02 220 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 Q6ZTK2 550 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 RFLNBQ8N5W9 214 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 OR52I2Q8NH67 350 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 SPPL3Q8TCT6 385 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 LCN9Q8WX39 176 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 OR2A5Q96R48 311 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 GFI1Q99684 422 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 RBCK1Q9BYM8 510 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 EVA1BQ9NVM1 165 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 FLRT3Q9NZU0 649 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 PIPOXQ9P0Z9 390 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 MGAT4CQ9UBM8 478 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 DPP7Q9UHL4 492 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 SPACA6W5XKT8 324 aa12.18□□□□□ -0.46
VRK3-209ENST00000594948 OR2M5A3KFT3 312 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 PAK4O96013 591 aaPredicted RBP12.17□□□□□ -0.46
VRK3-209ENST00000594948 GYPBP06028 91 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 SOX9P48436 509 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 PTH2RP49190 550 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 VEGFCP49767 419 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 SCAND1P57086 179 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 PPP2CBP62714 309 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 PPP2CAP67775 309 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 ENPP2Q13822 863 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 CAMK1Q14012 370 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 PON3Q15166 354 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 PRICKLE4Q2TBC4 344 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 ZNF626Q68DY1 528 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 SFRP4Q6FHJ7 346 aaPredicted RBP12.17□□□□□ -0.46
VRK3-209ENST00000594948 C3P1Q6ZMU1 363 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 ABHD13Q7L211 337 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 SYT9Q86SS6 491 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 SLC35F3Q8IY50 421 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 CAMKVQ8NCB2 501 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 GALNT11Q8NCW6 608 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 LHFPL5Q8TAF8 219 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 RSC1A1Q92681 617 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 ZMYND19Q96E35 227 aaPredicted RBP12.17□□□□□ -0.46
VRK3-209ENST00000594948 S100A16Q96FQ6 103 aaKnown RBP12.17□□□□□ -0.46
VRK3-209ENST00000594948 RBM18Q96H35 190 aaKnown RBP12.17□□□□□ -0.46
VRK3-209ENST00000594948 ZNF578Q96N58 590 aaPredicted RBP12.17□□□□□ -0.46
VRK3-209ENST00000594948 DDOQ99489 341 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 ORAI3Q9BRQ5 295 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 IL21RQ9HBE5 538 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 NOX4Q9NPH5 578 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 CD93Q9NPY3 652 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 FBXO34Q9NWN3 711 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 ANKRD10Q9NXR5 420 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 OBP2AQ9NY56 170 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 GNG8Q9UK08 70 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 FOXJ3Q9UPW0 622 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 CA5BQ9Y2D0 317 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 ZNF281Q9Y2X9 895 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 V9GY05 133 aa12.17□□□□□ -0.46
VRK3-209ENST00000594948 NPIPA5A0A0B4J1W7 369 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 A0A1W2PPK0 400 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 NPIPA7E9PJI5 369 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 ACOT7O00154 380 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 ARPC1BO15143 372 aaKnown RBP12.16□□□□□ -0.46
VRK3-209ENST00000594948 ARPC3O15145 178 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 PIN1P1O15428 100 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 CREBL2O60519 120 aaPredicted RBP12.16□□□□□ -0.46
VRK3-209ENST00000594948 PPM1BO75688 479 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 NDUFB6O95139 128 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 GPR75O95800 540 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 NPIPA8P0DM63 369 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 CCL5P13501 91 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 HIST1H1CP16403 213 aaKnown RBP12.16□□□□□ -0.46
VRK3-209ENST00000594948 CALCRP30988 508 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 IGFALSP35858 605 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 ACAA2P42765 397 aaKnown RBP12.16□□□□□ -0.46
VRK3-209ENST00000594948 MGAT2Q10469 447 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 SGCGQ13326 291 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 B3GNTL1Q67FW5 361 aaPredicted RBP12.16□□□□□ -0.46
VRK3-209ENST00000594948 SLC6A19Q695T7 634 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 APOOLQ6UXV4 268 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 DPY19L2P2Q6ZN68 376 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 OR4N5Q8IXE1 308 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 SDR9C7Q8NEX9 313 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 FLVCR1-AS1Q8TAF5 88 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 SP7Q8TDD2 431 aaPredicted RBP12.16□□□□□ -0.46
VRK3-209ENST00000594948 GRHL3Q8TE85 626 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 SMAP2Q8WU79 429 aaPredicted RBP12.16□□□□□ -0.46
VRK3-209ENST00000594948 THEM6Q8WUY1 208 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 CNOT9Q92600 299 aaKnown RBP12.16□□□□□ -0.46
VRK3-209ENST00000594948 HAVCR1Q96D42 359 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 DERL3Q96Q80 235 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms