RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 LSM11P83369 360 aaKnown RBP eCLIP14.29□□□□□ -0.12
LIG1-205ENST00000593425 SRSF2Q01130 221 aaKnown RBP14.29□□□□□ -0.12
LIG1-205ENST00000593425 CHRNB3Q05901 458 aa14.29□□□□□ -0.12
LIG1-205ENST00000593425 MST1LQ2TV78 715 aa14.29□□□□□ -0.12
LIG1-205ENST00000593425 ANXA8L1Q5VT79 327 aa14.29□□□□□ -0.12
LIG1-205ENST00000593425 IL17RELQ6ZVW7 336 aa14.29□□□□□ -0.12
LIG1-205ENST00000593425 RNF130Q86XS8 419 aa14.29□□□□□ -0.12
LIG1-205ENST00000593425 NUDCD3Q8IVD9 361 aa14.29□□□□□ -0.12
LIG1-205ENST00000593425 ZIC4Q8N9L1 334 aa14.29□□□□□ -0.12
LIG1-205ENST00000593425 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.29□□□□□ -0.12
LIG1-205ENST00000593425 TMEM45BQ96B21 275 aa14.29□□□□□ -0.12
LIG1-205ENST00000593425 FBXO17Q96EF6 278 aa14.29□□□□□ -0.12
LIG1-205ENST00000593425 ZNF385AQ96PM9 386 aaKnown RBP14.29□□□□□ -0.12
LIG1-205ENST00000593425 SORCS2Q96PQ0 1159 aa14.29□□□□□ -0.12
LIG1-205ENST00000593425 NAA11Q9BSU3 229 aaPredicted RBP14.29□□□□□ -0.12
LIG1-205ENST00000593425 SHARPINQ9H0F6 387 aa14.29□□□□□ -0.12
LIG1-205ENST00000593425 PARPBPQ9NWS1 579 aa14.29□□□□□ -0.12
LIG1-205ENST00000593425 LPAR3Q9UBY5 353 aa14.29□□□□□ -0.12
LIG1-205ENST00000593425 MOKQ9UQ07 419 aa14.29□□□□□ -0.12
LIG1-205ENST00000593425 PMF1-BGLAPU3KQ54 211 aa14.29□□□□□ -0.12
LIG1-205ENST00000593425 WDR91A4D1P6 747 aa14.28□□□□□ -0.12
LIG1-205ENST00000593425 SLC35F4A4IF30 521 aa14.28□□□□□ -0.12
LIG1-205ENST00000593425 AGAP5A6NIR3 686 aa14.28□□□□□ -0.12
LIG1-205ENST00000593425 EIF1BO60739 113 aaKnown RBP14.28□□□□□ -0.12
LIG1-205ENST00000593425 BMP4P12644 408 aa14.28□□□□□ -0.12
LIG1-205ENST00000593425 MPGP29372 298 aa14.28□□□□□ -0.12
LIG1-205ENST00000593425 IFFO1Q0D2I5 559 aa14.28□□□□□ -0.12
LIG1-205ENST00000593425 GGTLC2Q14390 218 aa14.28□□□□□ -0.12
LIG1-205ENST00000593425 SWI5Q1ZZU3 235 aa14.28□□□□□ -0.12
LIG1-205ENST00000593425 FAM174BQ3ZCQ3 159 aa14.28□□□□□ -0.12
LIG1-205ENST00000593425 HIKESHIQ53FT3 197 aa14.28□□□□□ -0.12
LIG1-205ENST00000593425 OTUD3Q5T2D3 398 aaPredicted RBP14.28□□□□□ -0.12
LIG1-205ENST00000593425 MALRD1Q5VYJ5 2156 aa14.28□□□□□ -0.12
LIG1-205ENST00000593425 PAQR6Q6TCH4 344 aa14.28□□□□□ -0.12
LIG1-205ENST00000593425 CMIPQ8IY22 773 aa14.28□□□□□ -0.12
LIG1-205ENST00000593425 TMEM99Q8N816 258 aa14.28□□□□□ -0.12
LIG1-205ENST00000593425 VPS37AQ8NEZ2 397 aa14.28□□□□□ -0.12
LIG1-205ENST00000593425 WDR60Q8WVS4 1066 aa14.28□□□□□ -0.12
LIG1-205ENST00000593425 PMM1Q92871 262 aa14.28□□□□□ -0.12
LIG1-205ENST00000593425 SORT1Q99523 831 aa14.28□□□□□ -0.12
LIG1-205ENST00000593425 CHODLQ9H9P2 273 aa14.28□□□□□ -0.12
LIG1-205ENST00000593425 E9PBE3 544 aa14.27□□□□□ -0.13
LIG1-205ENST00000593425 FAAHO00519 579 aa14.27□□□□□ -0.13
LIG1-205ENST00000593425 KLF11O14901 512 aa14.27□□□□□ -0.13
LIG1-205ENST00000593425 AKR7A3O95154 331 aa14.27□□□□□ -0.13
LIG1-205ENST00000593425 CDH2P19022 906 aaPredicted RBP14.27□□□□□ -0.13
LIG1-205ENST00000593425 RPS4Y1P22090 263 aaKnown RBP14.27□□□□□ -0.13
LIG1-205ENST00000593425 CDKN2CP42773 168 aa14.27□□□□□ -0.13
LIG1-205ENST00000593425 SLC1A3P43003 542 aa14.27□□□□□ -0.13
LIG1-205ENST00000593425 PDLIM4P50479 330 aa14.27□□□□□ -0.13
LIG1-205ENST00000593425 PRPS1P60891 318 aa14.27□□□□□ -0.13
LIG1-205ENST00000593425 ABCE1P61221 599 aaKnown RBP14.27□□□□□ -0.13
LIG1-205ENST00000593425 TGFBR3Q03167 851 aa14.27□□□□□ -0.13
LIG1-205ENST00000593425 EPS8Q12929 822 aa14.27□□□□□ -0.13
LIG1-205ENST00000593425 CEACAM7Q14002 265 aa14.27□□□□□ -0.13
LIG1-205ENST00000593425 CHI3L2Q15782 390 aa14.27□□□□□ -0.13
LIG1-205ENST00000593425 MRPL2Q5T653 305 aaKnown RBP14.27□□□□□ -0.13
LIG1-205ENST00000593425 KLHL24Q6TFL4 600 aa14.27□□□□□ -0.13
LIG1-205ENST00000593425 AAED1Q7RTV5 226 aa14.27□□□□□ -0.13
LIG1-205ENST00000593425 OR9K2Q8NGE7 335 aa14.27□□□□□ -0.13
LIG1-205ENST00000593425 TEX37Q96LM6 180 aa14.27□□□□□ -0.13
LIG1-205ENST00000593425 CCDC115Q96NT0 180 aa14.27□□□□□ -0.13
LIG1-205ENST00000593425 TRNT1Q96Q11 434 aaKnown RBP14.27□□□□□ -0.13
LIG1-205ENST00000593425 PRR14Q9BWN1 585 aa14.27□□□□□ -0.13
LIG1-205ENST00000593425 ROPN1BQ9BZX4 212 aaPredicted RBP14.27□□□□□ -0.13
LIG1-205ENST00000593425 ROPN1Q9HAT0 212 aaPredicted RBP14.27□□□□□ -0.13
LIG1-205ENST00000593425 IGHV1-18A0A0C4DH31 117 aa14.26□□□□□ -0.13
LIG1-205ENST00000593425 WNT11O96014 354 aa14.26□□□□□ -0.13
LIG1-205ENST00000593425 SERPINE1P05121 402 aa14.26□□□□□ -0.13
LIG1-205ENST00000593425 S100A3P33764 101 aa14.26□□□□□ -0.13
LIG1-205ENST00000593425 GZMKP49863 264 aa14.26□□□□□ -0.13
LIG1-205ENST00000593425 CLNS1AP54105 237 aaKnown RBP14.26□□□□□ -0.13
LIG1-205ENST00000593425 NME5P56597 212 aa14.26□□□□□ -0.13
LIG1-205ENST00000593425 VSNL1P62760 191 aa14.26□□□□□ -0.13
LIG1-205ENST00000593425 LGALS3BPQ08380 585 aa14.26□□□□□ -0.13
LIG1-205ENST00000593425 OR7A5Q15622 319 aa14.26□□□□□ -0.13
LIG1-205ENST00000593425 DPY19L1Q2PZI1 675 aa14.26□□□□□ -0.13
LIG1-205ENST00000593425 COX20Q5RI15 118 aa14.26□□□□□ -0.13
LIG1-205ENST00000593425 LRRC74BQ6ZQY2 392 aa14.26□□□□□ -0.13
LIG1-205ENST00000593425 ANKS4BQ8N8V4 417 aa14.26□□□□□ -0.13
LIG1-205ENST00000593425 C3orf49Q96BT1 292 aa14.26□□□□□ -0.13
LIG1-205ENST00000593425 MSI2Q96DH6 328 aaKnown RBP14.26□□□□□ -0.13
LIG1-205ENST00000593425 AURKBQ96GD4 344 aaPredicted RBP14.26□□□□□ -0.13
LIG1-205ENST00000593425 NUF2Q9BZD4 464 aa14.26□□□□□ -0.13
LIG1-205ENST00000593425 ADAM19Q9H013 955 aa14.26□□□□□ -0.13
LIG1-205ENST00000593425 BTNL2Q9UIR0 455 aa14.26□□□□□ -0.13
LIG1-205ENST00000593425 KCNS2Q9ULS6 477 aa14.26□□□□□ -0.13
LIG1-205ENST00000593425 RAP2CQ9Y3L5 183 aa14.26□□□□□ -0.13
LIG1-205ENST00000593425 FKBP7Q9Y680 259 aa14.26□□□□□ -0.13
LIG1-205ENST00000593425 IGHV4-61A0A0C4DH41 118 aa14.25□□□□□ -0.13
LIG1-205ENST00000593425 CFAP73A6NFT4 308 aa14.25□□□□□ -0.13
LIG1-205ENST00000593425 LIPT2A6NK58 231 aa14.25□□□□□ -0.13
LIG1-205ENST00000593425 AQP7P3A6NL99 342 aa14.25□□□□□ -0.13
LIG1-205ENST00000593425 ALDOCP09972 364 aaKnown RBP14.25□□□□□ -0.13
LIG1-205ENST00000593425 MYZAPP0CAP1 466 aa14.25□□□□□ -0.13
LIG1-205ENST00000593425 IL7RP16871 459 aa14.25□□□□□ -0.13
LIG1-205ENST00000593425 SRD5A1P18405 259 aa14.25□□□□□ -0.13
LIG1-205ENST00000593425 LBPP18428 481 aa14.25□□□□□ -0.13
LIG1-205ENST00000593425 NR4A2P43354 598 aa14.25□□□□□ -0.13
LIG1-205ENST00000593425 RPL14P50914 215 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms