RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 SLC1A3P43003 542 aa17.97■□□□□ 0.47
TRIM47-207ENST00000593089 FABP6P51161 128 aa17.97■□□□□ 0.47
TRIM47-207ENST00000593089 EPS8Q12929 822 aa17.97■□□□□ 0.47
TRIM47-207ENST00000593089 GNA13Q14344 377 aa17.97■□□□□ 0.47
TRIM47-207ENST00000593089 CEP85LQ5SZL2 805 aa17.97■□□□□ 0.47
TRIM47-207ENST00000593089 WDR31Q8NA23 367 aa17.97■□□□□ 0.47
TRIM47-207ENST00000593089 PMM1Q92871 262 aa17.97■□□□□ 0.47
TRIM47-207ENST00000593089 MTHFD2LQ9H903 347 aaPredicted RBP17.97■□□□□ 0.47
TRIM47-207ENST00000593089 SLC7A10Q9NS82 523 aa17.97■□□□□ 0.47
TRIM47-207ENST00000593089 PARPBPQ9NWS1 579 aa17.97■□□□□ 0.47
TRIM47-207ENST00000593089 FAM234BA2RU67 622 aa17.96■□□□□ 0.47
TRIM47-207ENST00000593089 CFAP73A6NFT4 308 aa17.96■□□□□ 0.47
TRIM47-207ENST00000593089 PDLIM1O00151 329 aa17.96■□□□□ 0.47
TRIM47-207ENST00000593089 GPRIN2O60269 458 aa17.96■□□□□ 0.47
TRIM47-207ENST00000593089 DBIP07108 87 aaKnown RBP17.96■□□□□ 0.47
TRIM47-207ENST00000593089 UQCRBP14927 111 aa17.96■□□□□ 0.47
TRIM47-207ENST00000593089 RPS4Y1P22090 263 aaKnown RBP17.96■□□□□ 0.47
TRIM47-207ENST00000593089 TXNL4AP83876 142 aaKnown RBP17.96■□□□□ 0.47
TRIM47-207ENST00000593089 OTUD3Q5T2D3 398 aaPredicted RBP17.96■□□□□ 0.47
TRIM47-207ENST00000593089 TSPO2Q5TGU0 170 aa17.96■□□□□ 0.47
TRIM47-207ENST00000593089 SPATA19Q7Z5L4 167 aa17.96■□□□□ 0.47
TRIM47-207ENST00000593089 ANKRD42Q8N9B4 389 aa17.96■□□□□ 0.47
TRIM47-207ENST00000593089 ZBTB18Q99592 522 aa17.96■□□□□ 0.47
TRIM47-207ENST00000593089 WDR55Q9H6Y2 383 aaPredicted RBP17.96■□□□□ 0.47
TRIM47-207ENST00000593089 DCTN4Q9UJW0 460 aa17.96■□□□□ 0.47
TRIM47-207ENST00000593089 ATP23Q9Y6H3 246 aa17.96■□□□□ 0.47
TRIM47-207ENST00000593089 PLCE1Q9P212 2302 aa17.96■□□□□ 0.47
TRIM47-207ENST00000593089 ALPK2Q86TB3 2170 aa17.96■□□□□ 0.46
TRIM47-207ENST00000593089 HEATR1Q9H583 2144 aaKnown RBP17.95■□□□□ 0.46
TRIM47-207ENST00000593089 FAAHO00519 579 aa17.95■□□□□ 0.46
TRIM47-207ENST00000593089 GKN3PP0CG01 181 aa17.95■□□□□ 0.46
TRIM47-207ENST00000593089 EPHA3P29320 983 aa17.95■□□□□ 0.46
TRIM47-207ENST00000593089 SLC25A3Q00325 362 aa17.95■□□□□ 0.46
TRIM47-207ENST00000593089 CEACAM7Q14002 265 aa17.95■□□□□ 0.46
TRIM47-207ENST00000593089 SLC17A1Q14916 467 aa17.95■□□□□ 0.46
TRIM47-207ENST00000593089 RAB35Q15286 201 aa17.95■□□□□ 0.46
TRIM47-207ENST00000593089 HHATQ5VTY9 493 aa17.95■□□□□ 0.46
TRIM47-207ENST00000593089 HMBOX1Q6NT76 420 aa17.95■□□□□ 0.46
TRIM47-207ENST00000593089 PAQR6Q6TCH4 344 aa17.95■□□□□ 0.46
TRIM47-207ENST00000593089 CLEC2AQ6UVW9 174 aa17.95■□□□□ 0.46
TRIM47-207ENST00000593089 PARD6BQ9BYG5 372 aa17.95■□□□□ 0.46
TRIM47-207ENST00000593089 AMBRA1Q9C0C7 1298 aa17.95■□□□□ 0.46
TRIM47-207ENST00000593089 SLC17A5Q9NRA2 495 aa17.95■□□□□ 0.46
TRIM47-207ENST00000593089 RLIMQ9NVW2 624 aa17.95■□□□□ 0.46
TRIM47-207ENST00000593089 AMDHD2Q9Y303 409 aa17.95■□□□□ 0.46
TRIM47-207ENST00000593089 GPR45Q9Y5Y3 372 aa17.95■□□□□ 0.46
TRIM47-207ENST00000593089 AKR7A3O95154 331 aa17.94■□□□□ 0.46
TRIM47-207ENST00000593089 CXCR1P25024 350 aa17.94■□□□□ 0.46
TRIM47-207ENST00000593089 MAP2K6P52564 334 aa17.94■□□□□ 0.46
TRIM47-207ENST00000593089 LRRC74AQ0VAA2 488 aa17.94■□□□□ 0.46
TRIM47-207ENST00000593089 OR7A5Q15622 319 aa17.94■□□□□ 0.46
TRIM47-207ENST00000593089 TNFAIP8L3Q5GJ75 292 aa17.94■□□□□ 0.46
TRIM47-207ENST00000593089 ZNF544Q6NX49 715 aa17.94■□□□□ 0.46
TRIM47-207ENST00000593089 VRK2Q86Y07 508 aa17.94■□□□□ 0.46
TRIM47-207ENST00000593089 HIPK1Q86Z02 1210 aa17.94■□□□□ 0.46
TRIM47-207ENST00000593089 PEX5LQ8IYB4 626 aa17.94■□□□□ 0.46
TRIM47-207ENST00000593089 C17orf78Q8N4C9 275 aa17.94■□□□□ 0.46
TRIM47-207ENST00000593089 TMEM99Q8N816 258 aa17.94■□□□□ 0.46
TRIM47-207ENST00000593089 C1orf162Q8NEQ5 155 aaPredicted RBP17.94■□□□□ 0.46
TRIM47-207ENST00000593089 OR10H5Q8NGA6 315 aa17.94■□□□□ 0.46
TRIM47-207ENST00000593089 SPATA3Q8NHX4 192 aa17.94■□□□□ 0.46
TRIM47-207ENST00000593089 ADAM19Q9H013 955 aa17.94■□□□□ 0.46
TRIM47-207ENST00000593089 A8MV72 311 aaPredicted RBP17.93■□□□□ 0.46
TRIM47-207ENST00000593089 RFXANKO14593 260 aa17.93■□□□□ 0.46
TRIM47-207ENST00000593089 KRT75O95678 551 aa17.93■□□□□ 0.46
TRIM47-207ENST00000593089 GPIP06744 558 aa17.93■□□□□ 0.46
TRIM47-207ENST00000593089 KITP10721 976 aa17.93■□□□□ 0.46
TRIM47-207ENST00000593089 CDH2P19022 906 aaPredicted RBP17.93■□□□□ 0.46
TRIM47-207ENST00000593089 DSCR9P59020 149 aa17.93■□□□□ 0.46
TRIM47-207ENST00000593089 TGFBR3Q03167 851 aa17.93■□□□□ 0.46
TRIM47-207ENST00000593089 MAPK11Q15759 364 aa17.93■□□□□ 0.46
TRIM47-207ENST00000593089 GSTA3Q16772 222 aa17.93■□□□□ 0.46
TRIM47-207ENST00000593089 ZNF836Q6ZNA1 936 aa17.93■□□□□ 0.46
TRIM47-207ENST00000593089 AAED1Q7RTV5 226 aa17.93■□□□□ 0.46
TRIM47-207ENST00000593089 ZNF440Q8IYI8 595 aa17.93■□□□□ 0.46
TRIM47-207ENST00000593089 CADM2Q8N3J6 435 aa17.93■□□□□ 0.46
TRIM47-207ENST00000593089 ZNF525Q8N782 197 aa17.93■□□□□ 0.46
TRIM47-207ENST00000593089 OR9K2Q8NGE7 335 aa17.93■□□□□ 0.46
TRIM47-207ENST00000593089 OR52P1PQ8NH57 321 aa17.93■□□□□ 0.46
TRIM47-207ENST00000593089 TMEM45BQ96B21 275 aa17.93■□□□□ 0.46
TRIM47-207ENST00000593089 ZNF385AQ96PM9 386 aaKnown RBP17.93■□□□□ 0.46
TRIM47-207ENST00000593089 FKRPQ9H9S5 495 aa17.93■□□□□ 0.46
TRIM47-207ENST00000593089 SLC6A13Q9NSD5 602 aa17.93■□□□□ 0.46
TRIM47-207ENST00000593089 P2RX2Q9UBL9 471 aa17.93■□□□□ 0.46
TRIM47-207ENST00000593089 FBN1P35555 2871 aaKnown RBP17.92■□□□□ 0.46
TRIM47-207ENST00000593089 A0A096LNT2 108 aa17.92■□□□□ 0.46
TRIM47-207ENST00000593089 CDHR4A6H8M9 788 aa17.92■□□□□ 0.46
TRIM47-207ENST00000593089 LIPT2A6NK58 231 aa17.92■□□□□ 0.46
TRIM47-207ENST00000593089 TRPC5OSA6NMA1 111 aa17.92■□□□□ 0.46
TRIM47-207ENST00000593089 MPGP29372 298 aa17.92■□□□□ 0.46
TRIM47-207ENST00000593089 PRPS1P60891 318 aa17.92■□□□□ 0.46
TRIM47-207ENST00000593089 BNIP2Q12982 314 aa17.92■□□□□ 0.46
TRIM47-207ENST00000593089 LIN52Q52LA3 116 aa17.92■□□□□ 0.46
TRIM47-207ENST00000593089 NXNQ6DKJ4 435 aa17.92■□□□□ 0.46
TRIM47-207ENST00000593089 GPAT4Q86UL3 456 aa17.92■□□□□ 0.46
TRIM47-207ENST00000593089 ZIC4Q8N9L1 334 aa17.92■□□□□ 0.46
TRIM47-207ENST00000593089 GLB1L3Q8NCI6 653 aaPredicted RBP17.92■□□□□ 0.46
TRIM47-207ENST00000593089 ADPRHL2Q9NX46 363 aa17.92■□□□□ 0.46
TRIM47-207ENST00000593089 AQP7P3A6NL99 342 aa17.91■□□□□ 0.46
TRIM47-207ENST00000593089 ATP6V1G2-DDX39BF2Z307 99 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms