RNA–Protein interactions for RNA: ENST00000592960.1

PKN1-215, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-215	ENST00000592960	TES	Q9UGI8	421 aa	Known RBP	13.56	□□□□□ -0.24
PKN1-215	ENST00000592960	BOK	Q9UMX3	212 aa	Predicted RBP	13.56	□□□□□ -0.24
PKN1-215	ENST00000592960	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	13.56	□□□□□ -0.24
PKN1-215	ENST00000592960		U3KQV3	271 aa		13.56	□□□□□ -0.24
PKN1-215	ENST00000592960	MXRA5	Q9NR99	2828 aa		13.56	□□□□□ -0.24
PKN1-215	ENST00000592960	TUBAL3	A6NHL2	446 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	LRRC3C	A6NJW4	275 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	CPSF4L	A6NMK7	179 aa	Known RBP	13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	FAM171A2	A8MVW0	826 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960		G3V2T6	193 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	ZNF264	O43296	627 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	SCO2	O43819	266 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	FADS1	O60427	444 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	BCAS1	O75363	584 aa	Predicted RBP	13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	GADD45G	O95257	159 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	HEXA	P06865	529 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	H1F0	P07305	194 aa	Known RBP	13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	ZNF136	P52737	540 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	SMIM11A	P58511	58 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	HOXC5	Q00444	222 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	SORD	Q00796	357 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	PLAUR	Q03405	335 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	PPP1R8	Q12972	351 aa	Known RBP	13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	PIN1	Q13526	163 aa	Predicted RBP	13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	GK3P	Q14409	553 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	CD226	Q15762	336 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	ACSF3	Q4G176	576 aa	Predicted RBP	13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	ENTPD8	Q5MY95	495 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	FNDC7	Q5VTL7	733 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	SHE	Q5VZ18	495 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	SHQ1	Q6PI26	577 aa	Known RBP	13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	CLEC9A	Q6UXN8	241 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	APOOL	Q6UXV4	268 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	MARCH3	Q86UD3	253 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	EPHX4	Q8IUS5	362 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	MISP	Q8IVT2	679 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	TMCO5A	Q8N6Q1	288 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	TACO1	Q9BSH4	297 aa	Known RBP	13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	POLR2J2	Q9GZM3	115 aa	Known RBP	13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	POLR2J3	Q9H1A7	115 aa	Known RBP	13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	COQ10B	Q9H8M1	238 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	CTPS2	Q9NRF8	586 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	BEX4	Q9NWD9	120 aa	Predicted RBP	13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	KLRF1	Q9NZS2	232 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	RHCG	Q9UBD6	479 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	A4GNT	Q9UNA3	340 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	LYVE1	Q9Y5Y7	322 aa		13.55	□□□□□ -0.24
PKN1-215	ENST00000592960	ANKRD33B	A6NCL7	494 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	PDLIM1	O00151	329 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	FFAR1	O14842	300 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	TPST2	O60704	377 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	FMO6P	O60774	539 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	OR5F1	O95221	314 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	ANGPTL1	O95841	491 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	PRG2	P13727	222 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	CD53	P19397	219 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	CCR4	P51679	360 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	ST3GAL3	Q11203	375 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	EXOC3L2	Q2M3D2	409 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	NDUFAF6	Q330K2	333 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	FGD3	Q5JSP0	725 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	TMEM179B	Q7Z7N9	219 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	STK32C	Q86UX6	486 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	OFCC1	Q8IZS5	231 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	CBR4	Q8N4T8	237 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	PIK3C3	Q8NEB9	887 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	FAM71C	Q8NEG0	241 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	OR10G3	Q8NGC4	313 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	OR52J3	Q8NH60	311 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	NRBF2	Q96F24	287 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	TIMP4	Q99727	224 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	PRR14	Q9BWN1	585 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	TRIM2	Q9C040	744 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	LAT2	Q9GZY6	243 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	SLC6A15	Q9H2J7	730 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	METTL7A	Q9H8H3	244 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	TMEM27	Q9HBJ8	222 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	EXOSC3	Q9NQT5	275 aa	Known RBP	13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	C8orf4	Q9NR00	106 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	ACER3	Q9NUN7	267 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	JKAMP	Q9P055	326 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	TMCC3	Q9ULS5	477 aa		13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	ANK3	Q12955	4377 aa	Known RBP	13.54	□□□□□ -0.24
PKN1-215	ENST00000592960	KDM4E	B2RXH2	506 aa	Predicted RBP	13.53	□□□□□ -0.24
PKN1-215	ENST00000592960	SOCS2	O14508	198 aa		13.53	□□□□□ -0.24
PKN1-215	ENST00000592960	EIF4E2	O60573	245 aa	Known RBP	13.53	□□□□□ -0.24
PKN1-215	ENST00000592960	IL2RA	P01589	272 aa		13.53	□□□□□ -0.24
PKN1-215	ENST00000592960	UQCRB	P14927	111 aa		13.53	□□□□□ -0.24
PKN1-215	ENST00000592960	COPZ1	P61923	177 aa		13.53	□□□□□ -0.24
PKN1-215	ENST00000592960	CRYZ	Q08257	329 aa	Known RBP	13.53	□□□□□ -0.24
PKN1-215	ENST00000592960	EPS8	Q12929	822 aa		13.53	□□□□□ -0.24
PKN1-215	ENST00000592960	SKP2	Q13309	424 aa		13.53	□□□□□ -0.24
PKN1-215	ENST00000592960	SF3B4	Q15427	424 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
PKN1-215	ENST00000592960	OR1Q1	Q15612	314 aa		13.53	□□□□□ -0.24
PKN1-215	ENST00000592960	DCST1	Q5T197	706 aa		13.53	□□□□□ -0.24
PKN1-215	ENST00000592960	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.53	□□□□□ -0.24
PKN1-215	ENST00000592960	NSUN5P2	Q63ZY6	315 aa		13.53	□□□□□ -0.24
PKN1-215	ENST00000592960	PPP4R4	Q6NUP7	873 aa		13.53	□□□□□ -0.24
PKN1-215	ENST00000592960	PACS2	Q86VP3	889 aa		13.53	□□□□□ -0.24
PKN1-215	ENST00000592960	PRIMA1	Q86XR5	153 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms