RNA–Protein interactions for RNA: ENST00000592883.5

RFX2-223, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-223	ENST00000592883	SLC38A1	Q9H2H9	487 aa		13.49	□□□□□ -0.25
RFX2-223	ENST00000592883	FKRP	Q9H9S5	495 aa		13.49	□□□□□ -0.25
RFX2-223	ENST00000592883	ROPN1	Q9HAT0	212 aa	Predicted RBP	13.49	□□□□□ -0.25
RFX2-223	ENST00000592883	PARPBP	Q9NWS1	579 aa		13.49	□□□□□ -0.25
RFX2-223	ENST00000592883	EIF1B	O60739	113 aa	Known RBP	13.48	□□□□□ -0.25
RFX2-223	ENST00000592883	CHRM4	P08173	479 aa		13.48	□□□□□ -0.25
RFX2-223	ENST00000592883	CDH2	P19022	906 aa	Predicted RBP	13.48	□□□□□ -0.25
RFX2-223	ENST00000592883	USF1	P22415	310 aa	Predicted RBP	13.48	□□□□□ -0.25
RFX2-223	ENST00000592883	ABCE1	P61221	599 aa	Known RBP	13.48	□□□□□ -0.25
RFX2-223	ENST00000592883	VSNL1	P62760	191 aa		13.48	□□□□□ -0.25
RFX2-223	ENST00000592883	CHRNB3	Q05901	458 aa		13.48	□□□□□ -0.25
RFX2-223	ENST00000592883	CHI3L2	Q15782	390 aa		13.48	□□□□□ -0.25
RFX2-223	ENST00000592883	MST1L	Q2TV78	715 aa		13.48	□□□□□ -0.25
RFX2-223	ENST00000592883	FAM174B	Q3ZCQ3	159 aa		13.48	□□□□□ -0.25
RFX2-223	ENST00000592883	TMEM99	Q8N816	258 aa		13.48	□□□□□ -0.25
RFX2-223	ENST00000592883	ZIC4	Q8N9L1	334 aa		13.48	□□□□□ -0.25
RFX2-223	ENST00000592883	WDR60	Q8WVS4	1066 aa		13.48	□□□□□ -0.25
RFX2-223	ENST00000592883	PMM1	Q92871	262 aa		13.48	□□□□□ -0.25
RFX2-223	ENST00000592883	FBXO17	Q96EF6	278 aa		13.48	□□□□□ -0.25
RFX2-223	ENST00000592883	ZNF385A	Q96PM9	386 aa	Known RBP	13.48	□□□□□ -0.25
RFX2-223	ENST00000592883	MOK	Q9UQ07	419 aa		13.48	□□□□□ -0.25
RFX2-223	ENST00000592883	PMF1-BGLAP	U3KQ54	211 aa		13.48	□□□□□ -0.25
RFX2-223	ENST00000592883	AGAP5	A6NIR3	686 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883		E9PBE3	544 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	KLF11	O14901	512 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	LMX1B	O60663	402 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	AKR7A3	O95154	331 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	F12	P00748	615 aa	Predicted RBP	13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	SERPINE1	P05121	402 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	CSF3	P09919	207 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	MYZAP	P0CAP1	466 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	BMP4	P12644	408 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	MPG	P29372	298 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	S100A3	P33764	101 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	SLC1A3	P43003	542 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	NME5	P56597	212 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	PRPS1	P60891	318 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	LSM11	P83369	360 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	TGFBR3	Q03167	851 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	EPS8	Q12929	822 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	SWI5	Q1ZZU3	235 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	KRTAP24-1	Q3LI83	254 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	HIKESHI	Q53FT3	197 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	PAQR6	Q6TCH4	344 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	CMIP	Q8IY22	773 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	TMEM45B	Q96B21	275 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	TEX37	Q96LM6	180 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	CCDC115	Q96NT0	180 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	SORCS2	Q96PQ0	1159 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	TRNT1	Q96Q11	434 aa	Known RBP	13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	SORT1	Q99523	831 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	NUF2	Q9BZD4	464 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	SHARPIN	Q9H0F6	387 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	RAP2C	Q9Y3L5	183 aa		13.47	□□□□□ -0.25
RFX2-223	ENST00000592883	VWC2L	B2RUY7	222 aa		13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	FAAH	O00519	579 aa		13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	WNT11	O96014	354 aa		13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	IL7R	P16871	459 aa		13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	LBP	P18428	481 aa		13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	RPS4Y1	P22090	263 aa	Known RBP	13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	IGFBP5	P24593	272 aa		13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	CDKN2C	P42773	168 aa		13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	RPL14	P50914	215 aa	Known RBP	13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	CLNS1A	P54105	237 aa	Known RBP	13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	SRSF2	Q01130	221 aa	Known RBP	13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	CEACAM7	Q14002	265 aa		13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	GGTLC2	Q14390	218 aa		13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	OR7A5	Q15622	319 aa		13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	DPY19L1	Q2PZI1	675 aa		13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	COX20	Q5RI15	118 aa		13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	MRPL2	Q5T653	305 aa	Known RBP	13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	LRRC74B	Q6ZQY2	392 aa		13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	IL17REL	Q6ZVW7	336 aa		13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	AAED1	Q7RTV5	226 aa		13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	OR9K2	Q8NGE7	335 aa		13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	PNPT1	Q8TCS8	783 aa	Known RBP	13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	AURKB	Q96GD4	344 aa	Predicted RBP	13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	ADAM19	Q9H013	955 aa		13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	LPAR3	Q9UBY5	353 aa		13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	BTNL2	Q9UIR0	455 aa		13.46	□□□□□ -0.25
RFX2-223	ENST00000592883	SVEP1	Q4LDE5	3571 aa		13.46	□□□□□ -0.26
RFX2-223	ENST00000592883	IGHV1-18	A0A0C4DH31	117 aa		13.45	□□□□□ -0.26
RFX2-223	ENST00000592883	SLC35F4	A4IF30	521 aa		13.45	□□□□□ -0.26
RFX2-223	ENST00000592883	CFAP73	A6NFT4	308 aa		13.45	□□□□□ -0.26
RFX2-223	ENST00000592883	CCDC154	A6NI56	674 aa		13.45	□□□□□ -0.26
RFX2-223	ENST00000592883	LIPT2	A6NK58	231 aa		13.45	□□□□□ -0.26
RFX2-223	ENST00000592883	GSN	P06396	782 aa		13.45	□□□□□ -0.26
RFX2-223	ENST00000592883	GPI	P06744	558 aa		13.45	□□□□□ -0.26
RFX2-223	ENST00000592883	ALDOC	P09972	364 aa	Known RBP	13.45	□□□□□ -0.26
RFX2-223	ENST00000592883	GKN3P	P0CG01	181 aa		13.45	□□□□□ -0.26
RFX2-223	ENST00000592883	IL12A	P29459	219 aa		13.45	□□□□□ -0.26
RFX2-223	ENST00000592883	SLC1A6	P48664	564 aa		13.45	□□□□□ -0.26
RFX2-223	ENST00000592883	PDLIM4	P50479	330 aa		13.45	□□□□□ -0.26
RFX2-223	ENST00000592883	UFM1	P61960	85 aa		13.45	□□□□□ -0.26
RFX2-223	ENST00000592883	LGALS3BP	Q08380	585 aa		13.45	□□□□□ -0.26
RFX2-223	ENST00000592883	BNIP2	Q12982	314 aa		13.45	□□□□□ -0.26
RFX2-223	ENST00000592883	KLHL24	Q6TFL4	600 aa		13.45	□□□□□ -0.26
RFX2-223	ENST00000592883	GPAT4	Q86UL3	456 aa		13.45	□□□□□ -0.26
RFX2-223	ENST00000592883	C3orf49	Q96BT1	292 aa		13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms