RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 SLC13A4Q9UKG4 626 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 TESMINQ9Y4I5 508 aa8.17□□□□□ -1.1
DNMT1-223ENST00000591239 IGKV3D-15A0A087WSY6 115 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 LIPT2A6NK58 231 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 ZNF716A6NP11 495 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 A8MVM7 634 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 TMEM229AB2RXF0 380 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 ZNF814B7Z6K7 855 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 DYNC1I1O14576 645 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 RAMP1O60894 148 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 NPIPB7O75200 414 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 GOSR1O95249 250 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 LGI1O95970 557 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 OPN1SWP03999 348 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 GPIP06744 558 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 COX4I1P13073 169 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 PSMB1P20618 241 aaKnown RBP8.16□□□□□ -1.1
DNMT1-223ENST00000591239 DRD4P21917 467 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 HTR2AP28223 471 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 IDUAP35475 653 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 OR3A2P47893 321 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 GYS2P54840 703 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 RGS8P57771 180 aaPredicted RBP8.16□□□□□ -1.1
DNMT1-223ENST00000591239 NCALDP61601 193 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 CEACAM7Q14002 265 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 DUSP7Q16829 419 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 VMACQ2NL98 169 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 INTS11Q5TA45 600 aaKnown RBP8.16□□□□□ -1.1
DNMT1-223ENST00000591239 FBXW10Q5XX13 1052 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 ANKRD34AQ69YU3 496 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 PAQR6Q6TCH4 344 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 CPLX4Q7Z7G2 160 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 GALNT5Q7Z7M9 940 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 PATL1Q86TB9 770 aaKnown RBP8.16□□□□□ -1.1
DNMT1-223ENST00000591239 CALHM3Q86XJ0 350 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 OR52E4Q8NGH9 312 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 RP9Q8TA86 221 aaKnown RBP8.16□□□□□ -1.1
DNMT1-223ENST00000591239 PIGXQ8TBF5 258 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 STK35Q8TDR2 534 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 RCN3Q96D15 328 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 WFDC6Q9BQY6 131 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 NAA11Q9BSU3 229 aaPredicted RBP8.16□□□□□ -1.1
DNMT1-223ENST00000591239 PRR14Q9BWN1 585 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 TRIM2Q9C040 744 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 NSRP1Q9H0G5 558 aaKnown RBP8.16□□□□□ -1.1
DNMT1-223ENST00000591239 EVA1AQ9H8M9 152 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 FANCFQ9NPI8 374 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 ZNF226Q9NYT6 803 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 EMC3Q9P0I2 261 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 VPS13CQ709C8 3753 aa8.16□□□□□ -1.1
DNMT1-223ENST00000591239 CCDC168Q8NDH2 2452 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 ABCA4P78363 2273 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 FREM1Q5H8C1 2179 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 A0A1B0GWA3 101 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 GMNCA6NCL1 334 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 ELOA3DA6NLF2 546 aaPredicted RBP8.15□□□□□ -1.1
DNMT1-223ENST00000591239 GPR171O14626 319 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 SNX3O60493 162 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 TPST2O60704 377 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 AKR7A3O95154 331 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 HRGP04196 525 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 C8BP07358 591 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 PNMTP11086 282 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 PPP3CBP16298 524 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 EDNRAP25101 427 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 NTF4P34130 210 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 SLC16A1P53985 500 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 SLC17A1Q14916 467 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 P2RY6Q15077 328 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 OR1Q1Q15612 314 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 OR7A5Q15622 319 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 NRF1Q16656 503 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 ELOA3BQ3SY89 546 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 ALG10BQ5I7T1 473 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 C1orf140Q5VVS0 124 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 ULK3Q6PHR2 472 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 C6orf89Q6UWU4 347 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 Q6ZT83 130 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 C22orf34Q6ZV56 151 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 CCDC80Q76M96 950 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 CDH24Q86UP0 819 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 RANBP3LQ86VV4 465 aaPredicted RBP8.15□□□□□ -1.1
DNMT1-223ENST00000591239 CXorf67Q86X51 503 aaPredicted RBP8.15□□□□□ -1.1
DNMT1-223ENST00000591239 CDC20BQ86Y33 519 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 TREML1Q86YW5 311 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 ZNF100Q8IYN0 542 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 GABRG1Q8N1C3 465 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 ELOA3Q8NG57 546 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 GPR32P1Q8NGA4 272 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 SLC26A7Q8TE54 656 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 DNAJA4Q8WW22 397 aaPredicted RBP8.15□□□□□ -1.1
DNMT1-223ENST00000591239 NRGNQ92686 78 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 SLC38A4Q969I6 547 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 ZC3HAV1LQ96H79 300 aaKnown RBP8.15□□□□□ -1.1
DNMT1-223ENST00000591239 ZNF583Q96ND8 569 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 KCNK17Q96T54 332 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 TAPBPLQ9BX59 468 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 HDHD5Q9BXW7 423 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 ACTR6Q9GZN1 396 aa8.15□□□□□ -1.1
DNMT1-223ENST00000591239 C12orf10Q9HB07 376 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms