RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 TMEM43Q9BTV4 400 aa17.15■□□□□ 0.34
DDX39A-214ENST00000590556 NDUFAF4Q9P032 175 aa17.15■□□□□ 0.34
DDX39A-214ENST00000590556 DOCK7Q96N67 2140 aa17.14■□□□□ 0.33
DDX39A-214ENST00000590556 IGKV1D-42A0A075B6H8 117 aa17.14■□□□□ 0.33
DDX39A-214ENST00000590556 AQP12BA6NM10 295 aa17.14■□□□□ 0.33
DDX39A-214ENST00000590556 FFAR1O14842 300 aa17.14■□□□□ 0.33
DDX39A-214ENST00000590556 IL2RAP01589 272 aa17.14■□□□□ 0.33
DDX39A-214ENST00000590556 FABP3P05413 133 aa17.14■□□□□ 0.33
DDX39A-214ENST00000590556 FCGR2AP12318 317 aa17.14■□□□□ 0.33
DDX39A-214ENST00000590556 RHCEP18577 417 aa17.14■□□□□ 0.33
DDX39A-214ENST00000590556 PTNP21246 168 aa17.14■□□□□ 0.33
DDX39A-214ENST00000590556 ENPP1P22413 925 aa17.14■□□□□ 0.33
DDX39A-214ENST00000590556 SLC35A1P78382 337 aa17.14■□□□□ 0.33
DDX39A-214ENST00000590556 ADORA2A-AS1P86434 159 aa17.14■□□□□ 0.33
DDX39A-214ENST00000590556 ST3GAL3Q11203 375 aa17.14■□□□□ 0.33
DDX39A-214ENST00000590556 WDR88Q6ZMY6 472 aa17.14■□□□□ 0.33
DDX39A-214ENST00000590556 AQP12AQ8IXF9 295 aa17.14■□□□□ 0.33
DDX39A-214ENST00000590556 OFCC1Q8IZS5 231 aa17.14■□□□□ 0.33
DDX39A-214ENST00000590556 ROBO4Q8WZ75 1007 aa17.14■□□□□ 0.33
DDX39A-214ENST00000590556 ZHX1-C8orf76Q96EF9 292 aa17.14■□□□□ 0.33
DDX39A-214ENST00000590556 KTI12Q96EK9 354 aaPredicted RBP17.14■□□□□ 0.33
DDX39A-214ENST00000590556 ZNF300Q96RE9 604 aaPredicted RBP17.14■□□□□ 0.33
DDX39A-214ENST00000590556 EPYCQ99645 322 aa17.14■□□□□ 0.33
DDX39A-214ENST00000590556 PRSS27Q9BQR3 290 aa17.14■□□□□ 0.33
DDX39A-214ENST00000590556 TAPBPLQ9BX59 468 aa17.14■□□□□ 0.33
DDX39A-214ENST00000590556 RHCGQ9UBD6 479 aa17.14■□□□□ 0.33
DDX39A-214ENST00000590556 GCN1Q92616 2671 aaKnown RBP17.14■□□□□ 0.33
DDX39A-214ENST00000590556 TRAV36DV7A0A075B6V5 113 aa17.13■□□□□ 0.33
DDX39A-214ENST00000590556 LIPT2A6NK58 231 aa17.13■□□□□ 0.33
DDX39A-214ENST00000590556 DNPH1O43598 174 aa17.13■□□□□ 0.33
DDX39A-214ENST00000590556 AQP8O94778 261 aa17.13■□□□□ 0.33
DDX39A-214ENST00000590556 TOXO94900 526 aa17.13■□□□□ 0.33
DDX39A-214ENST00000590556 RCBTB2O95199 551 aa17.13■□□□□ 0.33
DDX39A-214ENST00000590556 GPIP06744 558 aa17.13■□□□□ 0.33
DDX39A-214ENST00000590556 CEACAM8P31997 349 aaPredicted RBP17.13■□□□□ 0.33
DDX39A-214ENST00000590556 RPS5P46782 204 aaKnown RBP17.13■□□□□ 0.33
DDX39A-214ENST00000590556 SMSP52788 366 aa17.13■□□□□ 0.33
DDX39A-214ENST00000590556 CHRNB3Q05901 458 aa17.13■□□□□ 0.33
DDX39A-214ENST00000590556 TRAM2Q15035 370 aa17.13■□□□□ 0.33
DDX39A-214ENST00000590556 OR7A5Q15622 319 aa17.13■□□□□ 0.33
DDX39A-214ENST00000590556 FAM98BQ52LJ0 330 aaKnown RBP17.13■□□□□ 0.33
DDX39A-214ENST00000590556 OR2A2Q6IF42 318 aa17.13■□□□□ 0.33
DDX39A-214ENST00000590556 FCRLAQ7L513 359 aa17.13■□□□□ 0.33
DDX39A-214ENST00000590556 YTHDF3Q7Z739 585 aaKnown RBP17.13■□□□□ 0.33
DDX39A-214ENST00000590556 SPATA24Q86W54 205 aa17.13■□□□□ 0.33
DDX39A-214ENST00000590556 MED12LQ86YW9 2145 aa17.13■□□□□ 0.33
DDX39A-214ENST00000590556 ZDHHC21Q8IVQ6 265 aa17.13■□□□□ 0.33
DDX39A-214ENST00000590556 NKAIN4Q8IVV8 208 aa17.13■□□□□ 0.33
DDX39A-214ENST00000590556 FAM26EQ8N5C1 309 aa17.13■□□□□ 0.33
DDX39A-214ENST00000590556 MAGIXQ9H6Y5 334 aa17.13■□□□□ 0.33
DDX39A-214ENST00000590556 IL1RAPQ9NPH3 570 aa17.13■□□□□ 0.33
DDX39A-214ENST00000590556 RELNP78509 3460 aa17.12■□□□□ 0.33
DDX39A-214ENST00000590556 IGHV3-15A0A0B4J1V0 119 aa17.12■□□□□ 0.33
DDX39A-214ENST00000590556 A0A0G2JNJ9 132 aa17.12■□□□□ 0.33
DDX39A-214ENST00000590556 HSPB2A8KAH6 182 aa17.12■□□□□ 0.33
DDX39A-214ENST00000590556 OR2T1O43869 369 aa17.12■□□□□ 0.33
DDX39A-214ENST00000590556 EIF1BO60739 113 aaKnown RBP17.12■□□□□ 0.33
DDX39A-214ENST00000590556 ZG16O60844 167 aa17.12■□□□□ 0.33
DDX39A-214ENST00000590556 CIB2O75838 187 aa17.12■□□□□ 0.33
DDX39A-214ENST00000590556 DIRAS1O95057 198 aa17.12■□□□□ 0.33
DDX39A-214ENST00000590556 FPR1P21462 350 aa17.12■□□□□ 0.33
DDX39A-214ENST00000590556 RBM34P42696 430 aaKnown RBP17.12■□□□□ 0.33
DDX39A-214ENST00000590556 AGFG1P52594 562 aaKnown RBP17.12■□□□□ 0.33
DDX39A-214ENST00000590556 SRSF1Q07955 248 aaKnown RBP eCLIP17.12■□□□□ 0.332e-9■■□□□ 13.2
DDX39A-214ENST00000590556 HSPB2Q16082 182 aa17.12■□□□□ 0.33
DDX39A-214ENST00000590556 GTF2IRD2BQ6EKJ0 949 aa17.12■□□□□ 0.33
DDX39A-214ENST00000590556 GTF2IRD2Q86UP8 949 aa17.12■□□□□ 0.33
DDX39A-214ENST00000590556 MCEMP1Q8IX19 187 aa17.12■□□□□ 0.33
DDX39A-214ENST00000590556 MFSD8Q8NHS3 518 aa17.12■□□□□ 0.33
DDX39A-214ENST00000590556 TAAR8Q969N4 342 aa17.12■□□□□ 0.33
DDX39A-214ENST00000590556 INTS12Q96CB8 462 aaKnown RBP17.12■□□□□ 0.33
DDX39A-214ENST00000590556 SLC25A36Q96CQ1 311 aa17.12■□□□□ 0.33
DDX39A-214ENST00000590556 HS6ST2Q96MM7 605 aa17.12■□□□□ 0.33
DDX39A-214ENST00000590556 ZFP3Q96NJ6 502 aa17.12■□□□□ 0.33
DDX39A-214ENST00000590556 PIP5K1AQ99755 562 aa17.12■□□□□ 0.33
DDX39A-214ENST00000590556 NAA11Q9BSU3 229 aaPredicted RBP17.12■□□□□ 0.33
DDX39A-214ENST00000590556 ZNF426Q9BUY5 554 aa17.12■□□□□ 0.33
DDX39A-214ENST00000590556 PTDSS2Q9BVG9 487 aa17.12■□□□□ 0.33
DDX39A-214ENST00000590556 RNF122Q9H9V4 155 aa17.12■□□□□ 0.33
DDX39A-214ENST00000590556 NMNAT1Q9HAN9 279 aaPredicted RBP17.12■□□□□ 0.33
DDX39A-214ENST00000590556 COQ3Q9NZJ6 369 aa17.12■□□□□ 0.33
DDX39A-214ENST00000590556 Q9UFV3 132 aa17.12■□□□□ 0.33
DDX39A-214ENST00000590556 TENM4Q6N022 2769 aa17.12■□□□□ 0.33
DDX39A-214ENST00000590556 USP9XQ93008 2570 aaPredicted RBP17.12■□□□□ 0.33
DDX39A-214ENST00000590556 DHRS12A0PJE2 317 aa17.11■□□□□ 0.33
DDX39A-214ENST00000590556 SMAD9O15198 467 aaKnown RBP17.11■□□□□ 0.33
DDX39A-214ENST00000590556 PRSS23O95084 383 aa17.11■□□□□ 0.33
DDX39A-214ENST00000590556 H1F0P07305 194 aaKnown RBP17.11■□□□□ 0.33
DDX39A-214ENST00000590556 TMIGD3P0DMS9 266 aaPredicted RBP17.11■□□□□ 0.33
DDX39A-214ENST00000590556 UMPSP11172 480 aa17.11■□□□□ 0.33
DDX39A-214ENST00000590556 IQCCQ4KMZ1 466 aa17.11■□□□□ 0.33
DDX39A-214ENST00000590556 FAM69AQ5T7M9 428 aa17.11■□□□□ 0.33
DDX39A-214ENST00000590556 C1orf146Q5VVC0 180 aa17.11■□□□□ 0.33
DDX39A-214ENST00000590556 PIWIL3Q7Z3Z3 882 aaKnown RBP17.11■□□□□ 0.33
DDX39A-214ENST00000590556 CCDC71Q8IV32 467 aaPredicted RBP17.11■□□□□ 0.33
DDX39A-214ENST00000590556 ADGRG5Q8IZF4 528 aa17.11■□□□□ 0.33
DDX39A-214ENST00000590556 GCNT2Q8N0V5 402 aa17.11■□□□□ 0.33
DDX39A-214ENST00000590556 SLC43A2Q8N370 569 aa17.11■□□□□ 0.33
DDX39A-214ENST00000590556 C10orf53Q8N6V4 93 aa17.11■□□□□ 0.33
DDX39A-214ENST00000590556 NAXEQ8NCW5 288 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms