RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 MED11Q9P086 117 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 KLHL13Q9P2N7 655 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 PRODH2Q9UF12 536 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 PRSS50Q9UI38 385 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 ZNF639Q9UID6 485 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 BTNL2Q9UIR0 455 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 MRTO4Q9UKD2 239 aaKnown RBP5.31□□□□□ -1.56
VPS25-204ENST00000589577 MCTS1Q9ULC4 181 aaKnown RBP5.31□□□□□ -1.56
VPS25-204ENST00000589577 MGAT4BQ9UQ53 548 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 DYNC2H1Q8NCM8 4307 aaKnown RBP5.3□□□□□ -1.56
VPS25-204ENST00000589577 ARHGAP32A7KAX9 2087 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 SACSQ9NZJ4 4579 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 A0A096LPI6 279 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 A0A0J9YW62 118 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 RNF103-CHMP3A0A140T963 221 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 A0A1W2PR80 420 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 DNAJC9-AS1A6NH13 148 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 DUXAA6NLW8 204 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 CCT8L1PA6NM43 557 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 C9JVG2 144 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 ATP6V1G2-DDX39BF2Z307 99 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 TNFSF11O14788 317 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 AIM2O14862 343 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 ANKRD28O15084 1053 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 PGRMC2O15173 223 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 ADAMDEC1O15204 470 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 RRP9O43818 475 aaKnown RBP5.3□□□□□ -1.56
VPS25-204ENST00000589577 SCO2O43819 266 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 NME6O75414 186 aaPredicted RBP5.3□□□□□ -1.56
VPS25-204ENST00000589577 PDE5AO76074 875 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 C6orf47O95873 294 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 AGR2O95994 175 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 FSHBP01225 129 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 ATP1B1P05026 303 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 MSMBP08118 114 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 IFI6P09912 130 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 LAMP1P11279 417 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 BMP4P12644 408 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 ZNF17P17021 662 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 ADRA2CP18825 462 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 DRD5P21918 477 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 UQCRC2P22695 453 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 PTAFRP25105 342 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 PSMA4P25789 261 aaKnown RBP5.3□□□□□ -1.56
VPS25-204ENST00000589577 APOBEC3AP31941 199 aaPredicted RBP5.3□□□□□ -1.56
VPS25-204ENST00000589577 MAGEA8P43361 318 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 CCT3P49368 545 aaKnown RBP5.3□□□□□ -1.56
VPS25-204ENST00000589577 KHKP50053 298 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 EMDP50402 254 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 PSMD4P55036 377 aaKnown RBP5.3□□□□□ -1.56
VPS25-204ENST00000589577 CORO7P57737 925 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 PSPHP78330 225 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 PHC1P78364 1004 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 IL13RA1P78552 427 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 DUSP2Q05923 314 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 ZNF155Q12901 538 aaPredicted RBP5.3□□□□□ -1.56
VPS25-204ENST00000589577 GNA13Q14344 377 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 MLC1Q15049 377 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 ZNF239Q16600 458 aaKnown RBP5.3□□□□□ -1.56
VPS25-204ENST00000589577 PRICKLE4Q2TBC4 344 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 TRMT5Q32P41 509 aaKnown RBP5.3□□□□□ -1.56
VPS25-204ENST00000589577 BEAN1Q3B7T3 259 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 DNAL1Q4LDG9 190 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 REP15Q6BDI9 236 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 ANKRD26P1Q6NSI1 321 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 C1QL2Q7Z5L3 287 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 ANKRD46Q86W74 232 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 RIMKLAQ8IXN7 391 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 POU5F2Q8N7G0 328 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 ADCY4Q8NFM4 1077 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.3□□□□□ -1.56
VPS25-204ENST00000589577 SFXN5Q8TD22 340 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 ZNF675Q8TD23 568 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 WFDC12Q8WWY7 111 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 C22orf15Q8WYQ4 148 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 DVL3Q92997 716 aaPredicted RBP5.3□□□□□ -1.56
VPS25-204ENST00000589577 MCUR1Q96AQ8 359 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 VPS33AQ96AX1 596 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 MUCL1Q96DR8 90 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 NSL1Q96IY1 281 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 SLC35G5Q96KT7 338 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 CCDC115Q96NT0 180 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 AMDHD1Q96NU7 426 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 MS4A4EQ96PG1 132 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 VRK1Q99986 396 aaPredicted RBP5.3□□□□□ -1.56
VPS25-204ENST00000589577 ECSITQ9BQ95 431 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 SLC35A5Q9BS91 424 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 THUMPD3Q9BV44 507 aaKnown RBP5.3□□□□□ -1.56
VPS25-204ENST00000589577 G6PC2Q9NQR9 355 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 ZCCHC3Q9NUD5 404 aaKnown RBP5.3□□□□□ -1.56
VPS25-204ENST00000589577 EXD2Q9NVH0 621 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 MAT2BQ9NZL9 334 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 FLRT3Q9NZU0 649 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 PPP4R1LQ9P1A2 415 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 BCAP29Q9UHQ4 241 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 GPR55Q9Y2T6 319 aaPredicted RBP5.3□□□□□ -1.56
VPS25-204ENST00000589577 SLC25A15Q9Y619 301 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 ATP23Q9Y6H3 246 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 PLXNB1O43157 2135 aa5.3□□□□□ -1.56
VPS25-204ENST00000589577 NUP214P35658 2090 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms