RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 TCP10LQ8TDR4 215 aa6.93□□□□□ -1.3
ATG4D-210ENST00000588972 ITLN2Q8WWU7 325 aaPredicted RBP6.93□□□□□ -1.3
ATG4D-210ENST00000588972 ROBO4Q8WZ75 1007 aa6.93□□□□□ -1.3
ATG4D-210ENST00000588972 TSLPQ969D9 159 aa6.93□□□□□ -1.3
ATG4D-210ENST00000588972 CNDP1Q96KN2 507 aa6.93□□□□□ -1.3
ATG4D-210ENST00000588972 QRFPRQ96P65 431 aa6.93□□□□□ -1.3
ATG4D-210ENST00000588972 CSF3RQ99062 836 aa6.93□□□□□ -1.3
ATG4D-210ENST00000588972 SHCBP1LQ9BZQ2 653 aa6.93□□□□□ -1.3
ATG4D-210ENST00000588972 VN1R1Q9GZP7 353 aa6.93□□□□□ -1.3
ATG4D-210ENST00000588972 NRIP3Q9NQ35 241 aa6.93□□□□□ -1.3
ATG4D-210ENST00000588972 SIRT3Q9NTG7 399 aaPredicted RBP6.93□□□□□ -1.3
ATG4D-210ENST00000588972 ADPRHL2Q9NX46 363 aa6.93□□□□□ -1.3
ATG4D-210ENST00000588972 TINAGQ9UJW2 476 aa6.93□□□□□ -1.3
ATG4D-210ENST00000588972 FBXL4Q9UKA2 621 aa6.93□□□□□ -1.3
ATG4D-210ENST00000588972 NXT1Q9UKK6 140 aaKnown RBP6.93□□□□□ -1.3
ATG4D-210ENST00000588972 FBN3Q75N90 2809 aa6.93□□□□□ -1.3
ATG4D-210ENST00000588972 J3QR06 171 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 PLPP1O14494 284 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 PRKRAO75569 313 aaKnown RBP6.92□□□□□ -1.3
ATG4D-210ENST00000588972 PDYNP01213 254 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 CELA2AP08217 269 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 FAM58BPP0C7Q3 252 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 COX6A1P12074 109 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 ATP5A1P25705 553 aaKnown RBP6.92□□□□□ -1.3
ATG4D-210ENST00000588972 HTR1EP28566 365 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 BDKRB2P30411 391 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 SERPINB1P30740 379 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 ALDH3A1P30838 453 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 SSR2P43308 183 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 HTR6P50406 440 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 RAP1GDS1P52306 607 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 HNRNPFP52597 415 aaKnown RBP6.92□□□□□ -1.3
ATG4D-210ENST00000588972 NAGLUP54802 743 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 MTTPP55157 894 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 FOXA1P55317 472 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 LIM2P55344 173 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 SKP1P63208 163 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 BTG2P78543 158 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 PHEXP78562 749 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 CASP8Q14790 479 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 TNFAIP8L3Q5GJ75 292 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 AGAP7PQ5VUJ5 663 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 ZBTB49Q6ZSB9 765 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 ZCCHC23Q6ZST2 131 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 Q6ZSV7 163 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 GPRIN3Q6ZVF9 776 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 C10orf53Q8N6V4 93 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 OR11G2Q8NGC1 345 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 OR8H1Q8NGG4 311 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 AGAP11Q8TF27 550 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 RND1Q92730 232 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 TAAR8Q969N4 342 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 SPSB1Q96BD6 273 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 CMTM7Q96FZ5 175 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 AGAP4Q96P64 663 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 OR1F2PQ96R84 312 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 ZNF382Q96SR6 550 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 MAPKAP1Q9BPZ7 522 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 ZNF717Q9BY31 904 aaPredicted RBP6.92□□□□□ -1.3
ATG4D-210ENST00000588972 ELOVL6Q9H5J4 265 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 ZNF160Q9HCG1 818 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 MID1IP1Q9NPA3 183 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 FIS1Q9Y3D6 152 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 TIMM22Q9Y584 194 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 CACNA1CQ13936 2221 aa6.92□□□□□ -1.3
ATG4D-210ENST00000588972 WDR91A4D1P6 747 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 FAM90A26D6RGX4 464 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 PSMD12O00232 456 aaPredicted RBP6.91□□□□□ -1.3
ATG4D-210ENST00000588972 MANBAO00462 879 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 ITM2AO43736 263 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 EEDO75530 441 aaKnown RBP6.91□□□□□ -1.3
ATG4D-210ENST00000588972 CHRNGP07510 517 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 DANCRP0C864 163 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 C8orf89P0DMQ9 161 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 RNH1P13489 461 aaKnown RBP6.91□□□□□ -1.3
ATG4D-210ENST00000588972 ADRA2CP18825 462 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 ZNF10P21506 573 aaPredicted RBP6.91□□□□□ -1.3
ATG4D-210ENST00000588972 HIST1H1TP22492 207 aaPredicted RBP6.91□□□□□ -1.3
ATG4D-210ENST00000588972 HMOX2P30519 316 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 SSTR2P30874 369 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 TDGF1P3P51864 188 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 ELLP55199 621 aaPredicted RBP6.91□□□□□ -1.3
ATG4D-210ENST00000588972 RAB38P57729 211 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 KCNK10P57789 538 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 DNAJB13P59910 316 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 ZP1P60852 638 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 SNRPEP62304 92 aaKnown RBP6.91□□□□□ -1.3
ATG4D-210ENST00000588972 COL10A1Q03692 680 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 TGM3Q08188 693 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 Q0VFX4 171 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 IFT88Q13099 833 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 UBE2V1Q13404 147 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 ABRAXAS2Q15018 415 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 INAQ16352 499 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 ZNF630Q2M218 657 aaPredicted RBP6.91□□□□□ -1.3
ATG4D-210ENST00000588972 SMU1Q2TAY7 513 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 TMEM35AQ53FP2 167 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 CFAP157Q5JU67 520 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 CES4AQ5XG92 561 aa6.91□□□□□ -1.3
ATG4D-210ENST00000588972 CLEC6AQ6EIG7 209 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms