RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 PMPCAQ10713 525 aa16.99■□□□□ 0.31
CLPTM1-209ENST00000588855 P4HA3Q7Z4N8 544 aa16.99■□□□□ 0.31
CLPTM1-209ENST00000588855 CYP4Z1Q86W10 505 aa16.99■□□□□ 0.31
CLPTM1-209ENST00000588855 SPATA24Q86W54 205 aa16.99■□□□□ 0.31
CLPTM1-209ENST00000588855 ZDHHC21Q8IVQ6 265 aa16.99■□□□□ 0.31
CLPTM1-209ENST00000588855 MBD3L2Q8NHZ7 208 aaPredicted RBP16.99■□□□□ 0.31
CLPTM1-209ENST00000588855 MPP4Q96JB8 637 aa16.99■□□□□ 0.31
CLPTM1-209ENST00000588855 TMEM43Q9BTV4 400 aa16.99■□□□□ 0.31
CLPTM1-209ENST00000588855 ZNF426Q9BUY5 554 aa16.99■□□□□ 0.31
CLPTM1-209ENST00000588855 PTDSS2Q9BVG9 487 aa16.99■□□□□ 0.31
CLPTM1-209ENST00000588855 FNDC11Q9BVV2 318 aa16.99■□□□□ 0.31
CLPTM1-209ENST00000588855 TIGARQ9NQ88 270 aa16.99■□□□□ 0.31
CLPTM1-209ENST00000588855 MAN2C1Q9NTJ4 1040 aa16.99■□□□□ 0.31
CLPTM1-209ENST00000588855 MCTS1Q9ULC4 181 aaKnown RBP16.99■□□□□ 0.31
CLPTM1-209ENST00000588855 ZNF175Q9Y473 711 aa16.99■□□□□ 0.31
CLPTM1-209ENST00000588855 IGHV3-15A0A0B4J1V0 119 aa16.98■□□□□ 0.31
CLPTM1-209ENST00000588855 AQP8O94778 261 aa16.98■□□□□ 0.31
CLPTM1-209ENST00000588855 AHSA1O95433 338 aa16.98■□□□□ 0.31
CLPTM1-209ENST00000588855 SYNGR4O95473 234 aa16.98■□□□□ 0.31
CLPTM1-209ENST00000588855 THRBP10828 461 aa16.98■□□□□ 0.31
CLPTM1-209ENST00000588855 RHCEP18577 417 aa16.98■□□□□ 0.31
CLPTM1-209ENST00000588855 RPS5P46782 204 aaKnown RBP16.98■□□□□ 0.31
CLPTM1-209ENST00000588855 OR2B6P58173 313 aa16.98■□□□□ 0.31
CLPTM1-209ENST00000588855 ADORA2A-AS1P86434 159 aa16.98■□□□□ 0.31
CLPTM1-209ENST00000588855 SRSF1Q07955 248 aaKnown RBP eCLIP16.98■□□□□ 0.31
CLPTM1-209ENST00000588855 ST3GAL3Q11203 375 aa16.98■□□□□ 0.31
CLPTM1-209ENST00000588855 ZSCAN26Q16670 478 aa16.98■□□□□ 0.31
CLPTM1-209ENST00000588855 C1orf146Q5VVC0 180 aa16.98■□□□□ 0.31
CLPTM1-209ENST00000588855 TMEM211Q6ICI0 200 aa16.98■□□□□ 0.31
CLPTM1-209ENST00000588855 ADGRG5Q8IZF4 528 aa16.98■□□□□ 0.31
CLPTM1-209ENST00000588855 TMEM255BQ8WV15 326 aa16.98■□□□□ 0.31
CLPTM1-209ENST00000588855 ROBO4Q8WZ75 1007 aa16.98■□□□□ 0.31
CLPTM1-209ENST00000588855 WNT2BQ93097 391 aa16.98■□□□□ 0.31
CLPTM1-209ENST00000588855 MAGIXQ9H6Y5 334 aa16.98■□□□□ 0.31
CLPTM1-209ENST00000588855 IL1RAPQ9NPH3 570 aa16.98■□□□□ 0.31
CLPTM1-209ENST00000588855 FAM32AQ9Y421 112 aaKnown RBP16.98■□□□□ 0.31
CLPTM1-209ENST00000588855 FASNP49327 2511 aaKnown RBP16.98■□□□□ 0.31
CLPTM1-209ENST00000588855 TRAV36DV7A0A075B6V5 113 aa16.97■□□□□ 0.31
CLPTM1-209ENST00000588855 LIPT2A6NK58 231 aa16.97■□□□□ 0.31
CLPTM1-209ENST00000588855 KPNA4O00629 521 aaPredicted RBP16.97■□□□□ 0.31
CLPTM1-209ENST00000588855 SMAD9O15198 467 aaKnown RBP16.97■□□□□ 0.31
CLPTM1-209ENST00000588855 ITGA2P17301 1181 aa16.97■□□□□ 0.31
CLPTM1-209ENST00000588855 ENPP1P22413 925 aa16.97■□□□□ 0.31
CLPTM1-209ENST00000588855 IFNA8P32881 189 aa16.97■□□□□ 0.31
CLPTM1-209ENST00000588855 UGT2B15P54855 530 aa16.97■□□□□ 0.31
CLPTM1-209ENST00000588855 CHRNB3Q05901 458 aa16.97■□□□□ 0.31
CLPTM1-209ENST00000588855 OR7A5Q15622 319 aa16.97■□□□□ 0.31
CLPTM1-209ENST00000588855 FAM98BQ52LJ0 330 aaKnown RBP16.97■□□□□ 0.31
CLPTM1-209ENST00000588855 TTC33Q6PID6 262 aaPredicted RBP16.97■□□□□ 0.31
CLPTM1-209ENST00000588855 C5orf46Q6UWT4 87 aa16.97■□□□□ 0.31
CLPTM1-209ENST00000588855 NAXEQ8NCW5 288 aa16.97■□□□□ 0.31
CLPTM1-209ENST00000588855 CANT1Q8WVQ1 401 aa16.97■□□□□ 0.31
CLPTM1-209ENST00000588855 PRRG4Q9BZD6 226 aa16.97■□□□□ 0.31
CLPTM1-209ENST00000588855 TRAPPC4Q9Y296 219 aa16.97■□□□□ 0.31
CLPTM1-209ENST00000588855 A0A0G2JNJ9 132 aa16.96■□□□□ 0.31
CLPTM1-209ENST00000588855 TCRBV3S1A0A5B6 114 aa16.96■□□□□ 0.31
CLPTM1-209ENST00000588855 DHRS12A0PJE2 317 aa16.96■□□□□ 0.31
CLPTM1-209ENST00000588855 FTCDNL1E5RQL4 147 aa16.96■□□□□ 0.31
CLPTM1-209ENST00000588855 CIB2O75838 187 aa16.96■□□□□ 0.31
CLPTM1-209ENST00000588855 GPIP06744 558 aa16.96■□□□□ 0.31
CLPTM1-209ENST00000588855 FCGR2AP12318 317 aa16.96■□□□□ 0.31
CLPTM1-209ENST00000588855 FPR1P21462 350 aa16.96■□□□□ 0.31
CLPTM1-209ENST00000588855 TIMP3P35625 211 aa16.96■□□□□ 0.31
CLPTM1-209ENST00000588855 MAGEA2P43356 314 aa16.96■□□□□ 0.31
CLPTM1-209ENST00000588855 TRAM2Q15035 370 aa16.96■□□□□ 0.31
CLPTM1-209ENST00000588855 RIPPLY2Q5TAB7 128 aa16.96■□□□□ 0.31
CLPTM1-209ENST00000588855 PIK3C3Q8NEB9 887 aa16.96■□□□□ 0.31
CLPTM1-209ENST00000588855 RNF128Q8TEB7 428 aa16.96■□□□□ 0.31
CLPTM1-209ENST00000588855 POP5Q969H6 163 aaKnown RBP16.96■□□□□ 0.31
CLPTM1-209ENST00000588855 TAAR8Q969N4 342 aa16.96■□□□□ 0.31
CLPTM1-209ENST00000588855 PIP5K1AQ99755 562 aa16.96■□□□□ 0.31
CLPTM1-209ENST00000588855 TM9SF2Q99805 663 aa16.96■□□□□ 0.31
CLPTM1-209ENST00000588855 TAPBPLQ9BX59 468 aa16.96■□□□□ 0.31
CLPTM1-209ENST00000588855 RNF122Q9H9V4 155 aa16.96■□□□□ 0.31
CLPTM1-209ENST00000588855 NMNAT1Q9HAN9 279 aaPredicted RBP16.96■□□□□ 0.31
CLPTM1-209ENST00000588855 Q9UFV3 132 aa16.96■□□□□ 0.31
CLPTM1-209ENST00000588855 AURKCQ9UQB9 309 aa16.96■□□□□ 0.31
CLPTM1-209ENST00000588855 TESMINQ9Y4I5 508 aa16.96■□□□□ 0.31
CLPTM1-209ENST00000588855 INTS1Q8N201 2190 aaKnown RBP16.96■□□□□ 0.31
CLPTM1-209ENST00000588855 ZNF814B7Z6K7 855 aa16.96■□□□□ 0.3
CLPTM1-209ENST00000588855 DNPH1O43598 174 aa16.96■□□□□ 0.3
CLPTM1-209ENST00000588855 IL2RAP01589 272 aa16.96■□□□□ 0.3
CLPTM1-209ENST00000588855 CEACAM8P31997 349 aaPredicted RBP16.96■□□□□ 0.3
CLPTM1-209ENST00000588855 SLC35A1P78382 337 aa16.96■□□□□ 0.3
CLPTM1-209ENST00000588855 MTFR2Q6P444 385 aa16.96■□□□□ 0.3
CLPTM1-209ENST00000588855 FCRLAQ7L513 359 aa16.96■□□□□ 0.3
CLPTM1-209ENST00000588855 PIWIL3Q7Z3Z3 882 aaKnown RBP16.96■□□□□ 0.3
CLPTM1-209ENST00000588855 GCNT2Q8N0V5 402 aa16.96■□□□□ 0.3
CLPTM1-209ENST00000588855 PFN4Q8NHR9 129 aa16.96■□□□□ 0.3
CLPTM1-209ENST00000588855 MFSD8Q8NHS3 518 aa16.96■□□□□ 0.3
CLPTM1-209ENST00000588855 TMEM239Q8WW34 195 aa16.96■□□□□ 0.3
CLPTM1-209ENST00000588855 RND1Q92730 232 aa16.96■□□□□ 0.3
CLPTM1-209ENST00000588855 SLC25A36Q96CQ1 311 aa16.96■□□□□ 0.3
CLPTM1-209ENST00000588855 EPYCQ99645 322 aa16.96■□□□□ 0.3
CLPTM1-209ENST00000588855 MEPEQ9NQ76 525 aaPredicted RBP16.96■□□□□ 0.3
CLPTM1-209ENST00000588855 LRRN3E7EW58 273 aa16.95■□□□□ 0.3
CLPTM1-209ENST00000588855 PIP5K1CO60331 668 aa16.95■□□□□ 0.3
CLPTM1-209ENST00000588855 ZG16O60844 167 aa16.95■□□□□ 0.3
CLPTM1-209ENST00000588855 AGFG2O95081 481 aa16.95■□□□□ 0.3
CLPTM1-209ENST00000588855 H1F0P07305 194 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms