RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 IDUAP35475 653 aa18.01■□□□□ 0.47
DDX39A-207ENST00000588542 MNAT1P51948 309 aa18.01■□□□□ 0.47
DDX39A-207ENST00000588542 CDH12P55289 794 aa18.01■□□□□ 0.47
DDX39A-207ENST00000588542 SELENOWP63302 87 aa18.01■□□□□ 0.47
DDX39A-207ENST00000588542 H3F3AP84243 136 aa18.01■□□□□ 0.47
DDX39A-207ENST00000588542 ELOA3BQ3SY89 546 aa18.01■□□□□ 0.47
DDX39A-207ENST00000588542 ENTPD8Q5MY95 495 aa18.01■□□□□ 0.47
DDX39A-207ENST00000588542 C1orf140Q5VVS0 124 aa18.01■□□□□ 0.47
DDX39A-207ENST00000588542 ZNF787Q6DD87 383 aa18.01■□□□□ 0.47
DDX39A-207ENST00000588542 GTF2IRD2BQ6EKJ0 949 aa18.01■□□□□ 0.47
DDX39A-207ENST00000588542 ABLIM2Q6H8Q1 611 aa18.01■□□□□ 0.47
DDX39A-207ENST00000588542 C16orf89Q6UX73 402 aa18.01■□□□□ 0.47
DDX39A-207ENST00000588542 LUZP2Q86TE4 346 aa18.01■□□□□ 0.47
DDX39A-207ENST00000588542 GTF2IRD2Q86UP8 949 aa18.01■□□□□ 0.47
DDX39A-207ENST00000588542 DEFB107AQ8IZN7 70 aa18.01■□□□□ 0.47
DDX39A-207ENST00000588542 FAM156AQ8NDB6 213 aa18.01■□□□□ 0.47
DDX39A-207ENST00000588542 ELOA3Q8NG57 546 aa18.01■□□□□ 0.47
DDX39A-207ENST00000588542 SLC47A1Q96FL8 570 aa18.01■□□□□ 0.47
DDX39A-207ENST00000588542 CDRT15Q96T59 188 aa18.01■□□□□ 0.47
DDX39A-207ENST00000588542 PSD2Q9BQI7 771 aa18.01■□□□□ 0.47
DDX39A-207ENST00000588542 EGFL7Q9UHF1 273 aa18.01■□□□□ 0.47
DDX39A-207ENST00000588542 SLC9A8Q9Y2E8 581 aa18.01■□□□□ 0.47
DDX39A-207ENST00000588542 IGKV1D-42A0A075B6H8 117 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 A0A087WUJ7 227 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 LIPT2A6NK58 231 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 CPSF4LA6NMK7 179 aaKnown RBP18■□□□□ 0.47
DDX39A-207ENST00000588542 A8MXE2 369 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 B2RBV5 119 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 RAMP1O60894 148 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 PLGP00747 810 aaPredicted RBP18■□□□□ 0.47
DDX39A-207ENST00000588542 PNMTP11086 282 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 HSD17B1P14061 328 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 FPR1P21462 350 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 CALB2P22676 271 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 OR1E2P47887 323 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 SLC35A1P78382 337 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 MXRA7P84157 204 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 CEACAM7Q14002 265 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 FXNQ16595 210 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 ZNF613Q6PF04 617 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 TRPM8Q7Z2W7 1104 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 MCEMP1Q8IX19 187 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 TUSC5Q8IXB3 177 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 RBM15BQ8NDT2 890 aaKnown RBP18■□□□□ 0.47
DDX39A-207ENST00000588542 OR6K3Q8NGY3 331 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 RNASE6Q93091 150 aaKnown RBP18■□□□□ 0.47
DDX39A-207ENST00000588542 TPD52L3Q96J77 140 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 PTDSS2Q9BVG9 487 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 OPN3Q9H1Y3 402 aaPredicted RBP18■□□□□ 0.47
DDX39A-207ENST00000588542 GP6Q9HCN6 339 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 NDE1Q9NXR1 346 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 KLHL13Q9P2N7 655 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 EMC9Q9Y3B6 208 aa18■□□□□ 0.47
DDX39A-207ENST00000588542 MSTNO14793 375 aa17.99■□□□□ 0.47
DDX39A-207ENST00000588542 SMNDC1O75940 238 aaKnown RBP eCLIP17.99■□□□□ 0.476e-8■■□□□ 13.4
DDX39A-207ENST00000588542 CD8BP10966 210 aa17.99■□□□□ 0.47
DDX39A-207ENST00000588542 CTBP2P56545 445 aa17.99■□□□□ 0.47
DDX39A-207ENST00000588542 RASGEF1BQ0VAM2 473 aa17.99■□□□□ 0.47
DDX39A-207ENST00000588542 SWT1Q5T5J6 900 aaKnown RBP17.99■□□□□ 0.47
DDX39A-207ENST00000588542 LINC00114Q6XXX2 140 aa17.99■□□□□ 0.47
DDX39A-207ENST00000588542 RINLQ6ZS11 566 aa17.99■□□□□ 0.47
DDX39A-207ENST00000588542 CBLL1Q75N03 491 aa17.99■□□□□ 0.47
DDX39A-207ENST00000588542 NUFIP2Q7Z417 695 aaKnown RBP17.99■□□□□ 0.47
DDX39A-207ENST00000588542 VTCN1Q7Z7D3 282 aa17.99■□□□□ 0.47
DDX39A-207ENST00000588542 CCDC103Q8IW40 242 aa17.99■□□□□ 0.47
DDX39A-207ENST00000588542 ADAMTS16Q8TE57 1224 aa17.99■□□□□ 0.47
DDX39A-207ENST00000588542 ZHX1-C8orf76Q96EF9 292 aa17.99■□□□□ 0.47
DDX39A-207ENST00000588542 KTI12Q96EK9 354 aaPredicted RBP17.99■□□□□ 0.47
DDX39A-207ENST00000588542 SPOCK3Q9BQ16 436 aa17.99■□□□□ 0.47
DDX39A-207ENST00000588542 BCO1Q9HAY6 547 aa17.99■□□□□ 0.47
DDX39A-207ENST00000588542 PLSCR4Q9NRQ2 329 aa17.99■□□□□ 0.47
DDX39A-207ENST00000588542 KLHL9Q9P2J3 617 aa17.99■□□□□ 0.47
DDX39A-207ENST00000588542 ZNF716A6NP11 495 aa17.98■□□□□ 0.47
DDX39A-207ENST00000588542 FTCDNL1E5RQL4 147 aa17.98■□□□□ 0.47
DDX39A-207ENST00000588542 CHP2O43745 196 aa17.98■□□□□ 0.47
DDX39A-207ENST00000588542 EIF1BO60739 113 aaKnown RBP17.98■□□□□ 0.47
DDX39A-207ENST00000588542 FZD7O75084 574 aa17.98■□□□□ 0.47
DDX39A-207ENST00000588542 SERPINA1P01009 418 aa17.98■□□□□ 0.47
DDX39A-207ENST00000588542 GPIP06744 558 aa17.98■□□□□ 0.47
DDX39A-207ENST00000588542 YES1P07947 543 aa17.98■□□□□ 0.47
DDX39A-207ENST00000588542 TCN1P20061 433 aaPredicted RBP17.98■□□□□ 0.47
DDX39A-207ENST00000588542 OR7A5Q15622 319 aa17.98■□□□□ 0.47
DDX39A-207ENST00000588542 SAMD4BQ5PRF9 694 aaKnown RBP17.98■□□□□ 0.47
DDX39A-207ENST00000588542 GLYATQ6IB77 296 aa17.98■□□□□ 0.47
DDX39A-207ENST00000588542 ZNF474Q6S9Z5 364 aaPredicted RBP17.98■□□□□ 0.47
DDX39A-207ENST00000588542 PAQR6Q6TCH4 344 aa17.98■□□□□ 0.47
DDX39A-207ENST00000588542 WDR88Q6ZMY6 472 aa17.98■□□□□ 0.47
DDX39A-207ENST00000588542 MEX3BQ6ZN04 569 aaKnown RBP17.98■□□□□ 0.47
DDX39A-207ENST00000588542 P3H2Q8IVL5 708 aa17.98■□□□□ 0.47
DDX39A-207ENST00000588542 DMRTC2Q8IXT2 367 aaPredicted RBP17.98■□□□□ 0.47
DDX39A-207ENST00000588542 ZNF610Q8N9Z0 462 aa17.98■□□□□ 0.47
DDX39A-207ENST00000588542 ZNF300Q96RE9 604 aaPredicted RBP17.98■□□□□ 0.47
DDX39A-207ENST00000588542 RBM24Q9BX46 236 aaKnown RBP17.98■□□□□ 0.47
DDX39A-207ENST00000588542 ADPRHL2Q9NX46 363 aa17.98■□□□□ 0.47
DDX39A-207ENST00000588542 SELENONQ9NZV5 590 aa17.98■□□□□ 0.47
DDX39A-207ENST00000588542 PROCRQ9UNN8 238 aa17.98■□□□□ 0.47
DDX39A-207ENST00000588542 IGKV3D-15A0A087WSY6 115 aa17.97■□□□□ 0.47
DDX39A-207ENST00000588542 TRAPPC13A5PLN9 417 aa17.97■□□□□ 0.47
DDX39A-207ENST00000588542 ZNF682O95780 498 aa17.97■□□□□ 0.47
DDX39A-207ENST00000588542 UQCRC1P31930 480 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms