RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 SNRNP27Q8WVK2 155 aaKnown RBP5.28□□□□□ -1.56
SDF2-206ENST00000587788 ACOT12Q8WYK0 555 aa5.28□□□□□ -1.56
SDF2-206ENST00000587788 SLC25A46Q96AG3 418 aa5.28□□□□□ -1.56
SDF2-206ENST00000587788 ANKRD9Q96BM1 317 aaPredicted RBP5.28□□□□□ -1.56
SDF2-206ENST00000587788 ZG16BQ96DA0 208 aa5.28□□□□□ -1.56
SDF2-206ENST00000587788 MRPL48Q96GC5 212 aaKnown RBP5.28□□□□□ -1.56
SDF2-206ENST00000587788 RBM18Q96H35 190 aaKnown RBP5.28□□□□□ -1.56
SDF2-206ENST00000587788 C1orf159Q96HA4 380 aa5.28□□□□□ -1.56
SDF2-206ENST00000587788 FAM210AQ96ND0 272 aa5.28□□□□□ -1.56
SDF2-206ENST00000587788 NEURL2Q9BR09 285 aa5.28□□□□□ -1.56
SDF2-206ENST00000587788 HOXD1Q9GZZ0 328 aa5.28□□□□□ -1.56
SDF2-206ENST00000587788 QRSL1Q9H0R6 528 aaKnown RBP5.28□□□□□ -1.56
SDF2-206ENST00000587788 UBQLN3Q9H347 655 aa5.28□□□□□ -1.56
SDF2-206ENST00000587788 ZNF768Q9H5H4 540 aaKnown RBP5.28□□□□□ -1.56
SDF2-206ENST00000587788 EGLN3Q9H6Z9 239 aa5.28□□□□□ -1.56
SDF2-206ENST00000587788 SYNPO2LQ9H987 977 aa5.28□□□□□ -1.56
SDF2-206ENST00000587788 SMURF1Q9HCE7 757 aa5.28□□□□□ -1.56
SDF2-206ENST00000587788 FAM60AQ9NP50 221 aa5.28□□□□□ -1.56
SDF2-206ENST00000587788 ADAP2Q9NPF8 381 aa5.28□□□□□ -1.56
SDF2-206ENST00000587788 ABCB10Q9NRK6 738 aa5.28□□□□□ -1.56
SDF2-206ENST00000587788 SIDT1Q9NXL6 827 aaKnown RBP5.28□□□□□ -1.56
SDF2-206ENST00000587788 TAS2R16Q9NYV7 291 aa5.28□□□□□ -1.56
SDF2-206ENST00000587788 NPAP1Q9NZP6 1156 aa5.28□□□□□ -1.56
SDF2-206ENST00000587788 CNIH4Q9P003 139 aa5.28□□□□□ -1.56
SDF2-206ENST00000587788 AKAP7Q9P0M2 348 aaPredicted RBP5.28□□□□□ -1.56
SDF2-206ENST00000587788 TNFRSF10DQ9UBN6 386 aa5.28□□□□□ -1.56
SDF2-206ENST00000587788 CLEC2DQ9UHP7 191 aa5.28□□□□□ -1.56
SDF2-206ENST00000587788 ZNF229Q9UJW7 825 aa5.28□□□□□ -1.56
SDF2-206ENST00000587788 ZNF223Q9UK11 482 aaPredicted RBP5.28□□□□□ -1.56
SDF2-206ENST00000587788 CAB39Q9Y376 341 aaPredicted RBP5.28□□□□□ -1.56
SDF2-206ENST00000587788 MED31Q9Y3C7 131 aa5.28□□□□□ -1.56
SDF2-206ENST00000587788 CMAHPQ9Y471 501 aa5.28□□□□□ -1.56
SDF2-206ENST00000587788 CHST2Q9Y4C5 530 aa5.28□□□□□ -1.56
SDF2-206ENST00000587788 PCDHGB6Q9Y5F9 930 aa5.28□□□□□ -1.56
SDF2-206ENST00000587788 SPIN1Q9Y657 262 aaPredicted RBP5.28□□□□□ -1.56
SDF2-206ENST00000587788 ASPMQ8IZT6 3477 aa5.28□□□□□ -1.56
SDF2-206ENST00000587788 HEATR5BQ9P2D3 2071 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 IGHV5-51A0A0C4DH38 117 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 RIIAD1A6NNX1 92 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 EFCAB7A8K855 629 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 ZNF749O43361 778 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 FRS3O43559 492 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 DYRK3O43781 588 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 IDH3BO43837 385 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 PRAMEF2O60811 474 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 OR2B3O76000 313 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 KCNK2O95069 426 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 LYPD3O95274 346 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 NSA2O95478 260 aaKnown RBP5.27□□□□□ -1.57
SDF2-206ENST00000587788 IGF2P01344 180 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 LIMS3P0CW19 117 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 LIMS4P0CW20 117 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 PEPDP12955 493 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 PVRP15151 417 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 HK1P19367 917 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 PAICSP22234 425 aaKnown RBP5.27□□□□□ -1.57
SDF2-206ENST00000587788 F8A1P23610 371 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 SLC6A6P31641 620 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 TNFSF8P32971 234 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 SDC2P34741 201 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 SLC1A3P43003 542 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 GABRA4P48169 554 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 PSMD7P51665 324 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 GPR143P51810 404 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 GFRA1P56159 465 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 HSD17B7P56937 341 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 PPP3R1P63098 170 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 ACTC1P68032 377 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 ACTA1P68133 377 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 PSPHP78330 225 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 CCL7P80098 99 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 IFITM3Q01628 133 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 SCN1BQ07699 218 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 ZNF155Q12901 538 aaPredicted RBP5.27□□□□□ -1.57
SDF2-206ENST00000587788 ZNF141Q15928 474 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 TBC1D25Q3MII6 688 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 FLYWCH1Q4VC44 716 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 HES3Q5TGS1 186 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 LIPKQ5VXJ0 399 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 NKAIN2Q5VXU1 208 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 STEAP3Q658P3 488 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 MZT2AQ6P582 158 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 ULK3Q6PHR2 472 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 SMARCD3Q6STE5 483 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 PAMR1Q6UXH9 720 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 RTL4Q6ZR62 310 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 QSOX2Q6ZRP7 698 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 MEPCEQ7L2J0 689 aaKnown RBP5.27□□□□□ -1.57
SDF2-206ENST00000587788 CXXC5Q7LFL8 322 aaKnown RBP5.27□□□□□ -1.57
SDF2-206ENST00000587788 TMPRSS7Q7RTY8 843 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 ZNF761Q86XN6 746 aaPredicted RBP5.27□□□□□ -1.57
SDF2-206ENST00000587788 OR4N5Q8IXE1 308 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 ACBD7Q8N6N7 88 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 ZBTB8BQ8NAP8 495 aaPredicted RBP5.27□□□□□ -1.57
SDF2-206ENST00000587788 ZNF485Q8NCK3 441 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 OR7G1Q8NGA0 311 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 OR8D4Q8NGM9 314 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 OR4Q3Q8NH05 313 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 FANK1Q8TC84 345 aa5.27□□□□□ -1.57
SDF2-206ENST00000587788 IFI44Q8TCB0 444 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms