RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 A0A1W2PRQ8 180 aa13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 ZC3H12DA2A288 527 aaKnown RBP13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 HTR3EA5X5Y0 456 aa13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 LRRTM2O43300 516 aa13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 NPIPB7O75200 414 aa13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 NQO1P15559 274 aaKnown RBP13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 MAGEA2P43356 314 aa13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 RPS5P46782 204 aaKnown RBP13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 NUP107P57740 925 aa13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 FOXD4Q12950 439 aaPredicted RBP13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 DGCR6Q14129 220 aa13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 OR7A5Q15622 319 aa13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 ZNF239Q16600 458 aaKnown RBP13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 FGD3Q5JSP0 725 aa13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 FAM69AQ5T7M9 428 aa13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 LINC00114Q6XXX2 140 aa13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 ADGRE4PQ86SQ3 457 aa13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 TSPYL5Q86VY4 417 aaPredicted RBP13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 ADGRG5Q8IZF4 528 aa13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 SLC43A2Q8N370 569 aa13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 OR6S1Q8NH40 331 aa13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 MFSD8Q8NHS3 518 aa13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 CANT1Q8WVQ1 401 aa13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 TMEM239Q8WW34 195 aa13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 RND1Q92730 232 aa13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 ZNF845Q96IR2 970 aaPredicted RBP13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 ZFP3Q96NJ6 502 aa13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 TTYH2Q9BSA4 534 aa13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 NMNAT1Q9HAN9 279 aaPredicted RBP13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 RHCGQ9UBD6 479 aa13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 TMCC3Q9ULS5 477 aa13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 TESMINQ9Y4I5 508 aa13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 FAM215AQ9Y5M1 114 aa13.08□□□□□ -0.32
SCAMP4-209ENST00000585335 ESPL1Q14674 2120 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 MED12Q93074 2177 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 IGKV1D-42A0A075B6H8 117 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 MBD3L4A6NDZ8 208 aaPredicted RBP13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 MBD3L3A6NE82 208 aaPredicted RBP13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 ERICH4A6NGS2 130 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 MBD3L5A6NJ08 208 aaPredicted RBP13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 LIPT2A6NK58 231 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 SEMA7AO75326 666 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 KRT36O76013 467 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 DIRAS1O95057 198 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 GADD45GO95257 159 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 LYPD3O95274 346 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 PLGP00747 810 aaPredicted RBP13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 MT-ATP6P00846 226 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 THY1P04216 161 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 TIMP3P35625 211 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 SMSP52788 366 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 EGR4Q05215 589 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 PMPCAQ10713 525 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 RNPS1Q15287 305 aaKnown RBP13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 RIPPLY2Q5TAB7 128 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 RTL6Q6ICC9 239 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 ZNF730Q6ZMV8 503 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 WDR88Q6ZMY6 472 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 FCRLAQ7L513 359 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 NKAIN4Q8IVV8 208 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 CDK20Q8IZL9 346 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 RNF113BQ8IZP6 322 aaKnown RBP13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 MBD3L2Q8NHZ7 208 aaPredicted RBP13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 FNDC9Q8TBE3 224 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 PIGXQ8TBF5 258 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 TMEM255BQ8WV15 326 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 ACOT11Q8WXI4 607 aaPredicted RBP13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 UTP4Q969X6 686 aaKnown RBP13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 SLC25A36Q96CQ1 311 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 KTI12Q96EK9 354 aaPredicted RBP13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 DMRTA2Q96SC8 542 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 PRSS27Q9BQR3 290 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 ZNF426Q9BUY5 554 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 CHID1Q9BWS9 393 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 ASPNQ9BXN1 380 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 SRXN1Q9BYN0 137 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 GLRX2Q9NS18 164 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 COQ3Q9NZJ6 369 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 CORINQ9Y5Q5 1042 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 ZNF462Q96JM2 2506 aa13.07□□□□□ -0.32
SCAMP4-209ENST00000585335 RP1L1Q8IWN7 2480 aaPredicted RBP13.06□□□□□ -0.32
SCAMP4-209ENST00000585335 HSPB2A8KAH6 182 aa13.06□□□□□ -0.32
SCAMP4-209ENST00000585335 KPNA4O00629 521 aaPredicted RBP13.06□□□□□ -0.32
SCAMP4-209ENST00000585335 GNGT2O14610 69 aa13.06□□□□□ -0.32
SCAMP4-209ENST00000585335 FFAR1O14842 300 aa13.06□□□□□ -0.32
SCAMP4-209ENST00000585335 PRSS23O95084 383 aa13.06□□□□□ -0.32
SCAMP4-209ENST00000585335 IGF2P01344 180 aa13.06□□□□□ -0.32
SCAMP4-209ENST00000585335 MT-ND1P03886 318 aa13.06□□□□□ -0.32
SCAMP4-209ENST00000585335 HIST1H2ABP04908 130 aa13.06□□□□□ -0.32
SCAMP4-209ENST00000585335 GLI4P10075 376 aa13.06□□□□□ -0.32
SCAMP4-209ENST00000585335 IMPDH2P12268 514 aa13.06□□□□□ -0.32
SCAMP4-209ENST00000585335 FPR1P21462 350 aa13.06□□□□□ -0.32
SCAMP4-209ENST00000585335 RRM2P31350 389 aa13.06□□□□□ -0.32
SCAMP4-209ENST00000585335 ERFP50548 548 aa13.06□□□□□ -0.32
SCAMP4-209ENST00000585335 ACTR3P61158 418 aa13.06□□□□□ -0.32
SCAMP4-209ENST00000585335 HSPB2Q16082 182 aa13.06□□□□□ -0.32
SCAMP4-209ENST00000585335 EEF1A1P5Q5VTE0 462 aa13.06□□□□□ -0.32
SCAMP4-209ENST00000585335 PAQR6Q6TCH4 344 aa13.06□□□□□ -0.32
SCAMP4-209ENST00000585335 HIST3H2AQ7L7L0 130 aa13.06□□□□□ -0.32
SCAMP4-209ENST00000585335 MAMDC2Q7Z304 686 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms