RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	TMEM158	Q8WZ71	300 aa		13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	TRIM44	Q96DX7	344 aa	Predicted RBP	13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	FBXO17	Q96EF6	278 aa		13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	TEX37	Q96LM6	180 aa		13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	SORT1	Q99523	831 aa		13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	SLC38A1	Q9H2H9	487 aa		13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	FKRP	Q9H9S5	495 aa		13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	DCTN4	Q9UJW0	460 aa		13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	TRAPPC4	Q9Y296	219 aa		13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	ATR	Q13535	2644 aa		13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	CCDC154	A6NI56	674 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	KLF11	O14901	512 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	EIF1B	O60739	113 aa	Known RBP	13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	AKR7A3	O95154	331 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	FAM157C	P0CG43	387 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	IGHV4-31	P0DP07	118 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	IL7R	P16871	459 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	UFM1	P61960	85 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	VLDLR	P98155	873 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	CHRNB3	Q05901	458 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	CEACAM7	Q14002	265 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	SLC17A1	Q14916	467 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	OR7A5	Q15622	319 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	DPY19L1	Q2PZI1	675 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	HIKESHI	Q53FT3	197 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	COX20	Q5RI15	118 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	MRPL2	Q5T653	305 aa	Known RBP	13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	KLHL24	Q6TFL4	600 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	AAED1	Q7RTV5	226 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	GPAT4	Q86UL3	456 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	C17orf78	Q8N4C9	275 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	TMEM99	Q8N816	258 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	C1orf162	Q8NEQ5	155 aa	Predicted RBP	13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	AEN	Q8WTP8	325 aa	Known RBP	13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	CCDC115	Q96NT0	180 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	ZNF385A	Q96PM9	386 aa	Known RBP	13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	TRNT1	Q96Q11	434 aa	Known RBP	13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	PANX1	Q96RD7	426 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	BEX2	Q9BXY8	128 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	AMBRA1	Q9C0C7	1298 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	PNPO	Q9NVS9	261 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	PARPBP	Q9NWS1	579 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	BTNL2	Q9UIR0	455 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	CDC42EP3	Q9UKI2	254 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	MOK	Q9UQ07	419 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	PMF1-BGLAP	U3KQ54	211 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	PLCE1	Q9P212	2302 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	MXRA5	Q9NR99	2828 aa		13.25	□□□□□ -0.29
SREBF1-222	ENST00000583732	CFAP73	A6NFT4	308 aa		13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	AGAP5	A6NIR3	686 aa		13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	ZNF208	O43345	1280 aa		13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	ALDOC	P09972	364 aa	Known RBP	13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	GKN3P	P0CG01	181 aa		13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	NR2F1	P10589	423 aa		13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	UQCRB	P14927	111 aa		13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	MPG	P29372	298 aa		13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	APOBEC3A	P31941	199 aa	Predicted RBP	13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	SLC1A3	P43003	542 aa		13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	EFNA4	P52798	201 aa		13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	TGFBR3	Q03167	851 aa		13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	EPS8	Q12929	822 aa		13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	GNA13	Q14344	377 aa		13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	GGTLC2	Q14390	218 aa		13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	CARTPT	Q16568	116 aa		13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	CYB5R2	Q6BCY4	276 aa		13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	LRRC74B	Q6ZQY2	392 aa		13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	ZNF621	Q6ZSS3	439 aa		13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	IL17REL	Q6ZVW7	336 aa		13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	CMIP	Q8IY22	773 aa		13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	CADM2	Q8N3J6	435 aa		13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	TRIML2	Q8N7C3	387 aa		13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	OR9K2	Q8NGE7	335 aa		13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	PMM1	Q92871	262 aa		13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	CHODL	Q9H9P2	273 aa		13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	RLIM	Q9NVW2	624 aa		13.24	□□□□□ -0.29
SREBF1-222	ENST00000583732	BIRC5	O15392	142 aa		13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	RGS16	O15492	202 aa	Predicted RBP	13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	KRT33A	O76009	404 aa		13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	WNT11	O96014	354 aa		13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	GPI	P06744	558 aa		13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	DBI	P07108	87 aa	Known RBP	13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	CSF3	P09919	207 aa		13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	BMP4	P12644	408 aa		13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	RPS4Y1	P22090	263 aa	Known RBP	13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	CXCR1	P25024	350 aa		13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	IL12A	P29459	219 aa		13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	ANXA11	P50995	505 aa	Known RBP	13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	PRPS1	P60891	318 aa		13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	LGALS3BP	Q08380	585 aa		13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	BNIP2	Q12982	314 aa		13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	PAQR6	Q6TCH4	344 aa		13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	ZNF836	Q6ZNA1	936 aa		13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	VRK2	Q86Y07	508 aa		13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	ARIH2OS	Q8N7S6	290 aa		13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	TMEM45B	Q96B21	275 aa		13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	C3orf49	Q96BT1	292 aa		13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	AURKB	Q96GD4	344 aa	Predicted RBP	13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	SORCS2	Q96PQ0	1159 aa		13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	PAIP2	Q9BPZ3	127 aa	Known RBP	13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	SHARPIN	Q9H0F6	387 aa		13.23	□□□□□ -0.29

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