RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 SLC22A15Q8IZD6 547 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 ARL14Q8N4G2 192 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 GVQW1Q8N7I0 195 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 ZNF321PQ8N8H1 164 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 CDC26Q8NHZ8 85 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 FANK1Q8TC84 345 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 LRRC15Q8TF66 581 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 S100ZQ8WXG8 99 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 FAM3CQ92520 227 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 DLX4Q92988 240 aaPredicted RBP4.19□□□□□ -1.74
SS18-223ENST00000583595 MYLPFQ96A32 169 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 AGAP4Q96P64 663 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 RIT2Q99578 217 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 TUBGCP2Q9BSJ2 902 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 CHRDL1Q9BU40 450 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 STRADBQ9C0K7 418 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 OR51B5Q9H339 312 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 RPF2Q9H7B2 306 aaKnown RBP4.19□□□□□ -1.74
SS18-223ENST00000583595 C8orf33Q9H7E9 229 aaPredicted RBP4.19□□□□□ -1.74
SS18-223ENST00000583595 PLEKHA3Q9HB20 300 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 SIX2Q9NPC8 291 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 PARVAQ9NVD7 372 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 KLRF1Q9NZS2 232 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 SENP1Q9P0U3 644 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 PISDQ9UG56 409 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 RPH3ALQ9UNE2 315 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 RNF6Q9Y252 685 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 SELENOKQ9Y6D0 94 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 RNF215Q9Y6U7 377 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 COL22A1Q8NFW1 1626 aaPredicted RBP4.19□□□□□ -1.74
SS18-223ENST00000583595 DISP2A7MBM2 1401 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 ABCB11O95342 1321 aa4.19□□□□□ -1.74
SS18-223ENST00000583595 MYO5AQ9Y4I1 1855 aaKnown RBP4.18□□□□□ -1.74
SS18-223ENST00000583595 PPLO60437 1756 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 NFAT5O94916 1531 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 TRAV6A0A075B6T7 132 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 A0A1W2PQ72 361 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 CLDN25C9JDP6 229 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 H3BNH8 94 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 WRBO00258 174 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 CASC3O15234 703 aaKnown RBP4.18□□□□□ -1.74
SS18-223ENST00000583595 NBR2O15453 112 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 RNF13O43567 381 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 PI15O43692 258 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 EFNA2O43921 213 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 TIMM8AO60220 97 aaPredicted RBP4.18□□□□□ -1.74
SS18-223ENST00000583595 CDH16O75309 829 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 OR7A10O76100 309 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 H6PDO95479 791 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 PAK4O96013 591 aaPredicted RBP4.18□□□□□ -1.74
SS18-223ENST00000583595 EDN1P05305 212 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 PLEKP08567 350 aaPredicted RBP4.18□□□□□ -1.74
SS18-223ENST00000583595 ANXA3P12429 323 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 XRCC1P18887 633 aaPredicted RBP4.18□□□□□ -1.74
SS18-223ENST00000583595 IMPDH1P20839 514 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 C4BPBP20851 252 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 DCKP27707 260 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 NMT1P30419 496 aaKnown RBP4.18□□□□□ -1.74
SS18-223ENST00000583595 TALDO1P37837 337 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 SLC1A4P43007 532 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 BTDP43251 543 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 SLCO1A2P46721 670 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 HCAR3P49019 387 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 CCT3P49368 545 aaKnown RBP4.18□□□□□ -1.74
SS18-223ENST00000583595 KDSRQ06136 332 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 RIPPLY1Q0D2K3 151 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 BAMBIQ13145 260 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 SLC39A6Q13433 755 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 ENPP2Q13822 863 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 TSC22D1Q15714 1073 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 TMEM44Q2T9K0 475 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 OR4F3Q6IEY1 312 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 ANKRD26P1Q6NSI1 321 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 LEG1Q6P5S2 330 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 UQCC3Q6UW78 93 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 BTNL3Q6UXE8 466 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 PTAR1Q7Z6K3 402 aaPredicted RBP4.18□□□□□ -1.74
SS18-223ENST00000583595 TMCO2Q7Z6W1 182 aaPredicted RBP4.18□□□□□ -1.74
SS18-223ENST00000583595 SETD3Q86TU7 594 aaPredicted RBP4.18□□□□□ -1.74
SS18-223ENST00000583595 HPS6Q86YV9 775 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 LACC1Q8IV20 430 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 FAM9CQ8IZT9 166 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 CIARTQ8N365 385 aaPredicted RBP4.18□□□□□ -1.74
SS18-223ENST00000583595 METTL13Q8N6R0 699 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 DMBX1Q8NFW5 382 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 OR4D10Q8NGI6 311 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 OR52K1Q8NGK4 314 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 OR4D5Q8NGN0 318 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 OR1L4Q8NGR5 311 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 OR2T11Q8NH01 316 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 RPLP0P6Q8NHW5 317 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 CNIH3Q8TBE1 160 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 RMND5BQ96G75 393 aaPredicted RBP4.18□□□□□ -1.74
SS18-223ENST00000583595 ZNF354BQ96LW1 612 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 CNBD2Q96M20 576 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 ZNF578Q96N58 590 aaPredicted RBP4.18□□□□□ -1.74
SS18-223ENST00000583595 IL17FQ96PD4 163 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 PANX1Q96RD7 426 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 SLC29A1Q99808 456 aa4.18□□□□□ -1.74
SS18-223ENST00000583595 CITED1Q99966 193 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms