RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 ZNF638Q14966 1978 aaKnown RBP3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 A0A087WV48 116 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 A0A1W2PNU3 283 aaPredicted RBP3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 FAM220BPB1ANY3 271 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 SLC28A1O00337 649 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 CXCR6O00574 342 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 PRMT5O14744 637 aaPredicted RBP3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 LSM1O15116 133 aaKnown RBP3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 ECI2O75521 394 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 CREG1O75629 220 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 CDC123O75794 336 aaPredicted RBP3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 UPK1BO75841 260 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 TRIM16O95361 564 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 OXSR1O95747 527 aaPredicted RBP3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 TSPAN12O95859 305 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 RLN1P04808 185 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 HEXBP07686 556 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 SERPINF2P08697 491 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 SMIM10L2AP0DMW4 78 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 SMIM10L2BP0DMW5 78 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 SHC1P29353 583 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 CTNNB1P35222 781 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 MAGEA11P43364 429 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 STARD6P59095 220 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 KIAA1024LP59773 190 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 ERVPABLB-1P60509 514 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 ST8SIA6P61647 398 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 SIRPAP78324 504 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 IFITM2Q01629 132 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 PRKCDQ05655 676 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 RBPJQ06330 500 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 PTPRCAPQ14761 206 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 PON2Q15165 354 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 UPP1Q16831 310 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 IMPG1Q17R60 797 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 DEFB115Q30KQ5 88 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 TTLL9Q3SXZ7 439 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 PARP15Q460N3 678 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 ATP6AP1LQ52LC2 224 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 CDKL4Q5MAI5 379 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 KDM4DQ6B0I6 523 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 CAPN13Q6MZZ7 669 aaPredicted RBP3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 UGT3A1Q6NUS8 523 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 PNCKQ6P2M8 343 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 CD300LGQ6UXG3 332 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 TMEM179BQ7Z7N9 219 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 SCD5Q86SK9 330 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 ADCK1Q86TW2 530 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 LDB1Q86U70 411 aaPredicted RBP3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 RALGPS2Q86X27 583 aaPredicted RBP3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 MMAAQ8IVH4 418 aaKnown RBP3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 MICU2Q8IYU8 434 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 FAM9CQ8IZT9 166 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 ZCCHC7Q8N3Z6 543 aaKnown RBP3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 ZBTB44Q8NCP5 570 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 ZNF540Q8NDQ6 660 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 LPCAT1Q8NF37 534 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 GPRC5AQ8NFJ5 357 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 OR7G3Q8NG95 312 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 OR2T11Q8NH01 316 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 ZFP90Q8TF47 636 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 ROBO4Q8WZ75 1007 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 FCGR1BQ92637 280 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 RORBQ92753 470 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 EXT2Q93063 718 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 SLC38A4Q969I6 547 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 SPSB1Q96BD6 273 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 SPACA9Q96E40 222 aaPredicted RBP3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 ARSGQ96EG1 525 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 PPP3R2Q96LZ3 170 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 NSMCE3Q96MG7 304 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 SERPINB11Q96P15 392 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 GAL3ST4Q96RP7 486 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 KCNA7Q96RP8 456 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 TRIB3Q96RU7 358 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 RAD9AQ99638 391 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 INPP5KQ9BT40 448 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 NTMT1Q9BV86 223 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 ZYG11BQ9C0D3 744 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 FAM49AQ9H0Q0 323 aaPredicted RBP3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 DSN1Q9H410 356 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 KCNK15Q9H427 330 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 EHD1Q9H4M9 534 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 KAT8Q9H7Z6 458 aaKnown RBP3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 SIAEQ9HAT2 523 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 TM9SF3Q9HD45 589 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 NT5MQ9NPB1 228 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 ACOT13Q9NPJ3 140 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 FAM120CQ9NX05 1096 aaKnown RBP3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 NUDT4Q9NZJ9 180 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 UXTQ9UBK9 157 aaPredicted RBP3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 SNX7Q9UNH6 387 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 PIN4Q9Y237 131 aaKnown RBP3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 EIF3LQ9Y262 564 aaKnown RBP3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 BTRCQ9Y297 605 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 DHRS7Q9Y394 339 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 Q9Y3F1 56 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 TIMM22Q9Y584 194 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 KLK4Q9Y5K2 254 aa3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 PAPPA2Q9BXP8 1791 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms