RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114		A0A096LNT2	108 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	CFAP73	A6NFT4	308 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	ATP6V1G2-DDX39B	F2Z307	99 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	PDLIM1	O00151	329 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	SDHD	O14521	159 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	KLF11	O14901	512 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	DNPH1	O43598	174 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	KIT	P10721	976 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	FKBP2	P26885	142 aa	Known RBP	10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	SLC1A3	P43003	542 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	HTR3A	P46098	478 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	CLK1	P49759	484 aa	Known RBP	10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	H3F3A	P84243	136 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	LGALS3BP	Q08380	585 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	BST1	Q10588	318 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	EPS8	Q12929	822 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	SLC17A1	Q14916	467 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	DPY19L1	Q2PZI1	675 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	TMEM249	Q2WGJ8	235 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	CHRFAM7A	Q494W8	412 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	C6orf52	Q5T4I8	152 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	SSX8	Q7RTT4	187 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	VRK2	Q86Y07	508 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	HIPK1	Q86Z02	1210 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	CADM2	Q8N3J6	435 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	TRIML2	Q8N7C3	387 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	TMEM99	Q8N816	258 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	ANKRD42	Q8N9B4	389 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	OR10H5	Q8NGA6	315 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	OIT3	Q8WWZ8	545 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	ZNF385A	Q96PM9	386 aa	Known RBP	10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	WDR55	Q9H6Y2	383 aa	Predicted RBP	10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	SLC17A5	Q9NRA2	495 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	SLC6A13	Q9NSD5	602 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	AIG1	Q9NVV5	245 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	MOK	Q9UQ07	419 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	TRAPPC4	Q9Y296	219 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	SLC9A8	Q9Y2E8	581 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	PLCE1	Q9P212	2302 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	COL6A5	A8TX70	2615 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	ATR	Q13535	2644 aa		10.19	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	HEATR1	Q9H583	2144 aa	Known RBP	10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	FBN3	Q75N90	2809 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	TM9SF1	O15321	606 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	ZNF208	O43345	1280 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	EIF1B	O60739	113 aa	Known RBP	10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	PGR	P06401	933 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	ETFA	P13804	333 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	RPS4Y1	P22090	263 aa	Known RBP	10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	EPHA3	P29320	983 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	MPG	P29372	298 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	GNA13	Q14344	377 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	HIKESHI	Q53FT3	197 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	CEP85L	Q5SZL2	805 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	NXN	Q6DKJ4	435 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	OGFOD2	Q6N063	350 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	WDR93	Q6P2C0	686 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	PODNL1	Q6PEZ8	512 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	PAQR6	Q6TCH4	344 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	LRRC74B	Q6ZQY2	392 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	AAED1	Q7RTV5	226 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	PHC2	Q8IXK0	858 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	CMIP	Q8IY22	773 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	PEX5L	Q8IYB4	626 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	ZIC4	Q8N9L1	334 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	OR9K2	Q8NGE7	335 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	MGARP	Q8TDB4	240 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	NANOS1	Q8WY41	292 aa	Known RBP	10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	FAM168A	Q92567	244 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	PMM1	Q92871	262 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	TNFRSF13C	Q96RJ3	184 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	ZBTB18	Q99592	522 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	MTHFD2L	Q9H903	347 aa	Predicted RBP	10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	FKRP	Q9H9S5	495 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	PARPBP	Q9NWS1	579 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	ADPRHL2	Q9NX46	363 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	HAO1	Q9UJM8	370 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	DCTN4	Q9UJW0	460 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	AMDHD2	Q9Y303	409 aa		10.18	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	LIPT2	A6NK58	231 aa		10.17	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	RFXANK	O14593	260 aa		10.17	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	KRT33A	O76009	404 aa		10.17	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	IFNA2	P01563	188 aa		10.17	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	BCHE	P06276	602 aa		10.17	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	GPI	P06744	558 aa		10.17	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	DBI	P07108	87 aa	Known RBP	10.17	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	PRG2	P13727	222 aa		10.17	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	UQCRB	P14927	111 aa		10.17	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	ZNF16	P17020	682 aa	Predicted RBP	10.17	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	CXCR1	P25024	350 aa		10.17	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	ANXA11	P50995	505 aa	Known RBP	10.17	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	TGFBR3	Q03167	851 aa		10.17	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	MAPK11	Q15759	364 aa		10.17	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	CARTPT	Q16568	116 aa		10.17	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	GTDC1	Q4AE62	458 aa		10.17	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	HHAT	Q5VTY9	493 aa		10.17	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	AP1AR	Q63HQ0	302 aa		10.17	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	KLHL24	Q6TFL4	600 aa		10.17	□□□□□ -0.78
CDK5RAP3-223	ENST00000582114	ZNF836	Q6ZNA1	936 aa		10.17	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms