RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 ANXA8P13928 327 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 ZNF26P17031 533 aaPredicted RBP13.96□□□□□ -0.17
SS18-216ENST00000580751 IL11P20809 199 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 HTR2AP28223 471 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 TACR3P29371 465 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 RBM34P42696 430 aaKnown RBP13.96□□□□□ -0.17
SS18-216ENST00000580751 HSPA13P48723 471 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 RPS3AP61247 264 aaKnown RBP13.96□□□□□ -0.17
SS18-216ENST00000580751 SRYQ05066 204 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 OR1Q1Q15612 314 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 RFX4Q33E94 735 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 C4orf17Q53FE4 359 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 PDSS1Q5T2R2 415 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 POMZP3Q6PJE2 187 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 ESPNLQ6ZVH7 1005 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 CHMP1BQ7LBR1 199 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 ZPLD1Q8TCW7 415 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 RELTQ969Z4 430 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 SLC41A3Q96GZ6 507 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 KLHL15Q96M94 604 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 ALPK1Q96QP1 1244 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 CIB1Q99828 191 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 WFDC6Q9BQY6 131 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 FUZQ9BT04 418 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 ADAM19Q9H013 955 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 TMEM185BQ9H7F4 350 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 KRCC1Q9NPI7 259 aaPredicted RBP13.96□□□□□ -0.17
SS18-216ENST00000580751 CTPS2Q9NRF8 586 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 OSGIN1Q9UJX0 560 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 TENM4Q6N022 2769 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 TMED7-TICAM2A0A0A6YYA0 188 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 A0A0B4J2E0 115 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 A0A1B0GX12 115 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 E9PLN8 166 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 J3KTA2 159 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 EIF1AYO14602 144 aaKnown RBP13.95□□□□□ -0.18
SS18-216ENST00000580751 ZNF208O43345 1280 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 EFNA2O43921 213 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 DIRAS1O95057 198 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 CCNB2O95067 398 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 IGF2P01344 180 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 CXCR1P25024 350 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 YAP1P46937 504 aaKnown RBP13.95□□□□□ -0.18
SS18-216ENST00000580751 ALDH3A2P51648 485 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 CLDN20P56880 219 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 PPP2R2BQ00005 443 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 DAG1Q14118 895 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 ACSF3Q4G176 576 aaPredicted RBP13.95□□□□□ -0.18
SS18-216ENST00000580751 C1orf185Q5T7R7 199 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 LPCAT4Q643R3 524 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 MTFR2Q6P444 385 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 B3GNT6Q6ZMB0 384 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 GGNQ86UU5 652 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 STK32CQ86UX6 486 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 EPHX4Q8IUS5 362 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 CBR4Q8N4T8 237 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 GIPC3Q8TF64 312 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 ACOT11Q8WXI4 607 aaPredicted RBP13.95□□□□□ -0.18
SS18-216ENST00000580751 C3orf49Q96BT1 292 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 VKORC1Q9BQB6 163 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 SLC19A3Q9BZV2 496 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 COQ10BQ9H8M1 238 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 PAQR5Q9NXK6 330 aaPredicted RBP13.95□□□□□ -0.18
SS18-216ENST00000580751 ENOPH1Q9UHY7 261 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 SLC5A6Q9Y289 635 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 MEMO1Q9Y316 297 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 TMED7Q9Y3B3 224 aa13.95□□□□□ -0.18
SS18-216ENST00000580751 A0A1B0GWA3 101 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 SH3PXD2BA1X283 911 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 SAC3D1A6NKF1 404 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 CPSF4LA6NMK7 179 aaKnown RBP13.94□□□□□ -0.18
SS18-216ENST00000580751 CCL21O00585 134 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 LRRTM2O43300 516 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 ALPLP05186 524 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 SFTPDP35247 375 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 CLK1P49759 484 aaKnown RBP13.94□□□□□ -0.18
SS18-216ENST00000580751 SUCLG1P53597 346 aaKnown RBP13.94□□□□□ -0.18
SS18-216ENST00000580751 PER3P56645 1201 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 TMEM176BQ3YBM2 270 aaPredicted RBP13.94□□□□□ -0.18
SS18-216ENST00000580751 SYT14P1Q58G82 188 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 FAHD1Q6P587 224 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 C3P1Q6ZMU1 363 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 GDF7Q7Z4P5 450 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 FJX1Q86VR8 437 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 ADGRG3Q86Y34 549 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 ATP6V1C2Q8NEY4 427 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 OR2V1Q8NHB1 315 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 SLC7A13Q8TCU3 470 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 DDIT4LQ96D03 193 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 TUBA1CQ9BQE3 449 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 ZNF426Q9BUY5 554 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 TIGARQ9NQ88 270 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 MAN2C1Q9NTJ4 1040 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 VNN3Q9NY84 501 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 PDP1Q9P0J1 537 aaPredicted RBP13.94□□□□□ -0.18
SS18-216ENST00000580751 MGAT4BQ9UQ53 548 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 FAM215AQ9Y5M1 114 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 U3KQV3 271 aa13.94□□□□□ -0.18
SS18-216ENST00000580751 DOPEY1Q5JWR5 2465 aa13.93□□□□□ -0.18
SS18-216ENST00000580751 ELOA3DA6NLF2 546 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms