RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 APIPQ96GX9 242 aa11.91□□□□□ -0.5
CSNK1D-213ENST00000580446 TSPAN32Q96QS1 320 aa11.91□□□□□ -0.5
CSNK1D-213ENST00000580446 THUMPD3Q9BV44 507 aaKnown RBP11.91□□□□□ -0.5
CSNK1D-213ENST00000580446 VPS11Q9H270 941 aa11.91□□□□□ -0.5
CSNK1D-213ENST00000580446 ARPC4-TTLL3A0A0A6YYG9 625 aa11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 TRAV40A0A0B4J280 105 aa11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 SRRM5B3KS81 715 aa11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 PRPS2P11908 318 aa11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 NR4A1P22736 598 aa11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 NTSP30990 170 aa11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 SUMO3P55854 103 aaPredicted RBP11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 MRPS11P82912 194 aaKnown RBP11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 POU3F1Q03052 451 aaPredicted RBP11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 HEPACAMQ14CZ8 416 aa11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 PPP1R7Q15435 360 aa11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 KLHL26Q53HC5 615 aa11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 DEFB121Q5J5C9 76 aa11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 ANKRD26P1Q6NSI1 321 aa11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 CENPLQ8N0S6 344 aaPredicted RBP11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 C11orf44Q8N8P7 122 aa11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 OR6Y1Q8NGX8 325 aa11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 OR5W2Q8NH69 310 aa11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 PHF21AQ96BD5 680 aa11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 LRRC39Q96DD0 335 aa11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 PHF21BQ96EK2 531 aa11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 MARS2Q96GW9 593 aaKnown RBP11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 SLC30A2Q9BRI3 323 aa11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 HHATLQ9HCP6 504 aa11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 PARPBPQ9NWS1 579 aa11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 VPS29Q9UBQ0 182 aa11.9□□□□□ -0.5
CSNK1D-213ENST00000580446 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.89□□□□□ -0.51
CSNK1D-213ENST00000580446 A0A096LPK6 155 aa11.89□□□□□ -0.51
CSNK1D-213ENST00000580446 CLDN25C9JDP6 229 aa11.89□□□□□ -0.51
CSNK1D-213ENST00000580446 DDCP20711 480 aa11.89□□□□□ -0.51
CSNK1D-213ENST00000580446 CAPZA2P47755 286 aa11.89□□□□□ -0.51
CSNK1D-213ENST00000580446 SELENOPP49908 381 aa11.89□□□□□ -0.51
CSNK1D-213ENST00000580446 PDCD1Q15116 288 aa11.89□□□□□ -0.51
CSNK1D-213ENST00000580446 REP15Q6BDI9 236 aa11.89□□□□□ -0.51
CSNK1D-213ENST00000580446 PAQR6Q6TCH4 344 aa11.89□□□□□ -0.51
CSNK1D-213ENST00000580446 USP51Q70EK9 711 aa11.89□□□□□ -0.51
CSNK1D-213ENST00000580446 PDIK1LQ8N165 341 aa11.89□□□□□ -0.51
CSNK1D-213ENST00000580446 ST7LQ8TDW4 575 aa11.89□□□□□ -0.51
CSNK1D-213ENST00000580446 HOXB13Q92826 284 aaPredicted RBP11.89□□□□□ -0.51
CSNK1D-213ENST00000580446 CDS1Q92903 461 aa11.89□□□□□ -0.51
CSNK1D-213ENST00000580446 GIMAP5Q96F15 307 aa11.89□□□□□ -0.51
CSNK1D-213ENST00000580446 MRI1Q9BV20 369 aa11.89□□□□□ -0.51
CSNK1D-213ENST00000580446 CTPS2Q9NRF8 586 aa11.89□□□□□ -0.51
CSNK1D-213ENST00000580446 SERINC1Q9NRX5 453 aa11.89□□□□□ -0.51
CSNK1D-213ENST00000580446 PCTPQ9UKL6 214 aa11.89□□□□□ -0.51
CSNK1D-213ENST00000580446 IGHV1-69-2A0A0G2JMI3 117 aa11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 SYCE1LA8MT33 242 aa11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 ZNF587BE7ETH6 402 aa11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 PLXNB1O43157 2135 aa11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 DHHO43323 396 aa11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 TPD52L2O43399 206 aaKnown RBP11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 ERLIN1O75477 346 aa11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 UPK3AO75631 287 aa11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 CLPTM1O96005 669 aa11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 CBR1P16152 277 aa11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 ZNF12P17014 697 aa11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 EFNA1P20827 205 aaPredicted RBP11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 DOC2BQ14184 412 aa11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 FRG1Q14331 258 aaKnown RBP11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 SLC17A1Q14916 467 aa11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 TSTQ16762 297 aaKnown RBP11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 NKPD1Q17RQ9 610 aa11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 VPS26BQ4G0F5 336 aa11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 OLIG3Q7RTU3 272 aa11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 R3HCC1LQ7Z5L2 792 aaKnown RBP11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 LYG1Q8N1E2 194 aa11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 CDRT4Q8N9R6 151 aa11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 PPP1R14AQ96A00 147 aa11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 CIDECQ96AQ7 238 aaPredicted RBP11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 ACSS3Q9H6R3 686 aa11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 MIEF1Q9NQG6 463 aa11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 INSIG2Q9Y5U4 225 aa11.88□□□□□ -0.51
CSNK1D-213ENST00000580446 CENPVL1A0A0U1RR11 272 aa11.87□□□□□ -0.51
CSNK1D-213ENST00000580446 TRAF3IP2O43734 574 aaPredicted RBP11.87□□□□□ -0.51
CSNK1D-213ENST00000580446 PMS2P2O95744 297 aa11.87□□□□□ -0.51
CSNK1D-213ENST00000580446 ANXA4P09525 319 aaPredicted RBP11.87□□□□□ -0.51
CSNK1D-213ENST00000580446 ALOX5P09917 674 aa11.87□□□□□ -0.51
CSNK1D-213ENST00000580446 UBL4AP11441 157 aa11.87□□□□□ -0.51
CSNK1D-213ENST00000580446 MAKP20794 623 aa11.87□□□□□ -0.51
CSNK1D-213ENST00000580446 CD80P33681 288 aa11.87□□□□□ -0.51
CSNK1D-213ENST00000580446 EVX1P49640 407 aa11.87□□□□□ -0.51
CSNK1D-213ENST00000580446 HTR6P50406 440 aa11.87□□□□□ -0.51
CSNK1D-213ENST00000580446 CDH13P55290 713 aa11.87□□□□□ -0.51
CSNK1D-213ENST00000580446 POU6F2P78424 691 aaPredicted RBP11.87□□□□□ -0.51
CSNK1D-213ENST00000580446 ARF1P84077 181 aaKnown RBP11.87□□□□□ -0.51
CSNK1D-213ENST00000580446 GLO1Q04760 184 aa11.87□□□□□ -0.51
CSNK1D-213ENST00000580446 CD69Q07108 199 aa11.87□□□□□ -0.51
CSNK1D-213ENST00000580446 PDIA2Q13087 525 aaKnown RBP11.87□□□□□ -0.51
CSNK1D-213ENST00000580446 CBFBQ13951 182 aa11.87□□□□□ -0.51
CSNK1D-213ENST00000580446 C3orf36Q3SXR2 165 aa11.87□□□□□ -0.51
CSNK1D-213ENST00000580446 FOXB2Q5VYV0 432 aa11.87□□□□□ -0.51
CSNK1D-213ENST00000580446 MTERF4Q7Z6M4 381 aaKnown RBP11.87□□□□□ -0.51
CSNK1D-213ENST00000580446 ADGRG3Q86Y34 549 aa11.87□□□□□ -0.51
CSNK1D-213ENST00000580446 ZBED8Q8IZ13 594 aa11.87□□□□□ -0.51
CSNK1D-213ENST00000580446 POMGNT2Q8NAT1 580 aa11.87□□□□□ -0.51
CSNK1D-213ENST00000580446 TRIM44Q96DX7 344 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms