RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 A0A1W2PNR3 127 aa14.24□□□□□ -0.13
VAPA-204ENST00000577901 GMNCA6NCL1 334 aa14.24□□□□□ -0.13
VAPA-204ENST00000577901 PRORSD1PA6NEY8 169 aa14.24□□□□□ -0.13
VAPA-204ENST00000577901 MRASO14807 208 aa14.24□□□□□ -0.13
VAPA-204ENST00000577901 PRKD3O94806 890 aa14.24□□□□□ -0.13
VAPA-204ENST00000577901 THBDP07204 575 aa14.24□□□□□ -0.13
VAPA-204ENST00000577901 TACR3P29371 465 aa14.24□□□□□ -0.13
VAPA-204ENST00000577901 LSP1P33241 339 aa14.24□□□□□ -0.13
VAPA-204ENST00000577901 SEC24CP53992 1094 aa14.24□□□□□ -0.13
VAPA-204ENST00000577901 CSNK2A1P68400 391 aaPredicted RBP14.24□□□□□ -0.13
VAPA-204ENST00000577901 ZNF239Q16600 458 aaKnown RBP14.24□□□□□ -0.13
VAPA-204ENST00000577901 SYT14P1Q58G82 188 aa14.24□□□□□ -0.13
VAPA-204ENST00000577901 BEX5Q5H9J7 111 aa14.24□□□□□ -0.13
VAPA-204ENST00000577901 REP15Q6BDI9 236 aa14.24□□□□□ -0.13
VAPA-204ENST00000577901 WBP2NLQ6ICG8 309 aa14.24□□□□□ -0.13
VAPA-204ENST00000577901 NANOGP8Q6NSW7 305 aa14.24□□□□□ -0.13
VAPA-204ENST00000577901 TMPPEQ6ZT21 453 aa14.24□□□□□ -0.13
VAPA-204ENST00000577901 SNX32Q86XE0 403 aa14.24□□□□□ -0.13
VAPA-204ENST00000577901 ADGRG3Q86Y34 549 aa14.24□□□□□ -0.13
VAPA-204ENST00000577901 SLC30A8Q8IWU4 369 aa14.24□□□□□ -0.13
VAPA-204ENST00000577901 BHLHE22Q8NFJ8 381 aaPredicted RBP14.24□□□□□ -0.13
VAPA-204ENST00000577901 RP9Q8TA86 221 aaKnown RBP14.24□□□□□ -0.13
VAPA-204ENST00000577901 IGFBPL1Q8WX77 278 aa14.24□□□□□ -0.13
VAPA-204ENST00000577901 SRXN1Q9BYN0 137 aa14.24□□□□□ -0.13
VAPA-204ENST00000577901 KAT8Q9H7Z6 458 aaKnown RBP14.24□□□□□ -0.13
VAPA-204ENST00000577901 NANOGQ9H9S0 305 aa14.24□□□□□ -0.13
VAPA-204ENST00000577901 PLSCR4Q9NRQ2 329 aa14.24□□□□□ -0.13
VAPA-204ENST00000577901 JMJD1CQ15652 2540 aa14.24□□□□□ -0.13
VAPA-204ENST00000577901 ANK3Q12955 4377 aaKnown RBP14.24□□□□□ -0.13
VAPA-204ENST00000577901 HEATR5AQ86XA9 2040 aa14.24□□□□□ -0.13
VAPA-204ENST00000577901 FBN1P35555 2871 aaKnown RBP14.24□□□□□ -0.13
VAPA-204ENST00000577901 RAI1Q7Z5J4 1906 aaPredicted RBP14.23□□□□□ -0.13
VAPA-204ENST00000577901 TMED7-TICAM2A0A0A6YYA0 188 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 SULT2B1O00204 365 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 ZNF208O43345 1280 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 KLF4O43474 513 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 SS18L1O75177 396 aaPredicted RBP14.23□□□□□ -0.13
VAPA-204ENST00000577901 PAX1P15863 534 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 PPP3CBP16298 524 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 CCNA2P20248 432 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 ENPP1P22413 925 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 CXCR1P25024 350 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 ACAA2P42765 397 aaKnown RBP14.23□□□□□ -0.13
VAPA-204ENST00000577901 SELPLGQ14242 412 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 TMEM201Q5SNT2 666 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 ZNF704Q6ZNC4 412 aaPredicted RBP14.23□□□□□ -0.13
VAPA-204ENST00000577901 FCRLAQ7L513 359 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 SLC43A2Q8N370 569 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 CADM2Q8N3J6 435 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 OR8J3Q8NGG0 315 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 OR6K3Q8NGY3 331 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 OR10A6Q8NH74 314 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 TMEM171Q8WVE6 324 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 DDIT4LQ96D03 193 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 ZHX1-C8orf76Q96EF9 292 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 ECSITQ9BQ95 431 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 ADAM19Q9H013 955 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 FAM107BQ9H098 131 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 COQ10BQ9H8M1 238 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 GP6Q9HCN6 339 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 ARMCX1Q9P291 453 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 OSGIN1Q9UJX0 560 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 SLC13A4Q9UKG4 626 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 CLEC4AQ9UMR7 237 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 TMED7Q9Y3B3 224 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 HDGFL3Q9Y3E1 203 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 CHST2Q9Y4C5 530 aa14.23□□□□□ -0.13
VAPA-204ENST00000577901 AQP1P29972 269 aa14.22□□□□□ -0.13
VAPA-204ENST00000577901 DIO1P49895 249 aa14.22□□□□□ -0.13
VAPA-204ENST00000577901 GNGT1P63211 74 aa14.22□□□□□ -0.13
VAPA-204ENST00000577901 DHRS4L2Q6PKH6 230 aa14.22□□□□□ -0.13
VAPA-204ENST00000577901 NET1Q7Z628 596 aaPredicted RBP14.22□□□□□ -0.13
VAPA-204ENST00000577901 MTDHQ86UE4 582 aaKnown RBP14.22□□□□□ -0.13
VAPA-204ENST00000577901 PTOV1Q86YD1 416 aa14.22□□□□□ -0.13
VAPA-204ENST00000577901 ARMC8Q8IUR7 673 aa14.22□□□□□ -0.13
VAPA-204ENST00000577901 RNF128Q8TEB7 428 aa14.22□□□□□ -0.13
VAPA-204ENST00000577901 ABHD3Q8WU67 409 aa14.22□□□□□ -0.13
VAPA-204ENST00000577901 TACO1Q9BSH4 297 aaKnown RBP14.22□□□□□ -0.13
VAPA-204ENST00000577901 CXorf56Q9H5V9 222 aa14.22□□□□□ -0.13
VAPA-204ENST00000577901 EVA1AQ9H8M9 152 aa14.22□□□□□ -0.13
VAPA-204ENST00000577901 ZNF701Q9NV72 531 aaPredicted RBP14.22□□□□□ -0.13
VAPA-204ENST00000577901 ADAM21Q9UKJ8 722 aa14.22□□□□□ -0.13
VAPA-204ENST00000577901 PMS2P2O95744 297 aa14.21□□□□□ -0.13
VAPA-204ENST00000577901 PLAUP00749 431 aa14.21□□□□□ -0.13
VAPA-204ENST00000577901 PRG2P13727 222 aa14.21□□□□□ -0.13
VAPA-204ENST00000577901 GYS2P54840 703 aa14.21□□□□□ -0.13
VAPA-204ENST00000577901 NR1H2P55055 460 aa14.21□□□□□ -0.13
VAPA-204ENST00000577901 INTS11Q5TA45 600 aaKnown RBP14.21□□□□□ -0.13
VAPA-204ENST00000577901 STAC2Q6ZMT1 411 aa14.21□□□□□ -0.13
VAPA-204ENST00000577901 CXXC5Q7LFL8 322 aaKnown RBP14.21□□□□□ -0.13
VAPA-204ENST00000577901 STK32CQ86UX6 486 aa14.21□□□□□ -0.13
VAPA-204ENST00000577901 PLPPR2Q96GM1 343 aa14.21□□□□□ -0.13
VAPA-204ENST00000577901 FANCFQ9NPI8 374 aa14.21□□□□□ -0.13
VAPA-204ENST00000577901 TMEM181Q9P2C4 612 aa14.21□□□□□ -0.13
VAPA-204ENST00000577901 KLHL9Q9P2J3 617 aa14.21□□□□□ -0.13
VAPA-204ENST00000577901 RPS6KB2Q9UBS0 482 aa14.21□□□□□ -0.13
VAPA-204ENST00000577901 TRAPPC4Q9Y296 219 aa14.21□□□□□ -0.13
VAPA-204ENST00000577901 ARID1AO14497 2285 aa14.21□□□□□ -0.14
VAPA-204ENST00000577901 IGHV3-15A0A0B4J1V0 119 aa14.2□□□□□ -0.14
VAPA-204ENST00000577901 TMEM72A0PK05 275 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms