RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 C1orf140Q5VVS0 124 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 GLYATQ6IB77 296 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 VWA1Q6PCB0 445 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 C6orf89Q6UWU4 347 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 FKBP9P1Q75LS8 142 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 BTLAQ7Z6A9 289 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 KIF18BQ86Y91 864 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 RNF148Q8N7C7 305 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 OR6K3Q8NGY3 331 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 PIGXQ8TBF5 258 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 ABHD3Q8WU67 409 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 RNASE6Q93091 150 aaKnown RBP13.58□□□□□ -0.24
LITAF-217ENST00000575426 SLC38A4Q969I6 547 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 STARD4Q96DR4 205 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 WFDC6Q9BQY6 131 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 RBM24Q9BX46 236 aaKnown RBP13.58□□□□□ -0.24
LITAF-217ENST00000575426 GP6Q9HCN6 339 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 EGFL7Q9UHF1 273 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 RPS6KA6Q9UK32 745 aa13.58□□□□□ -0.24
LITAF-217ENST00000575426 A0A0B4J2E0 115 aa13.57□□□□□ -0.24
LITAF-217ENST00000575426 A0A1B0GX12 115 aa13.57□□□□□ -0.24
LITAF-217ENST00000575426 TRAPPC13A5PLN9 417 aa13.57□□□□□ -0.24
LITAF-217ENST00000575426 TMEM229AB2RXF0 380 aa13.57□□□□□ -0.24
LITAF-217ENST00000575426 C19orf84I3L1E1 186 aa13.57□□□□□ -0.24
LITAF-217ENST00000575426 SMAD9O15198 467 aaKnown RBP13.57□□□□□ -0.24
LITAF-217ENST00000575426 OR2T1O43869 369 aa13.57□□□□□ -0.24
LITAF-217ENST00000575426 TPST2O60704 377 aa13.57□□□□□ -0.24
LITAF-217ENST00000575426 CYTIPO60759 359 aa13.57□□□□□ -0.24
LITAF-217ENST00000575426 YES1P07947 543 aa13.57□□□□□ -0.24
LITAF-217ENST00000575426 IMPDH2P12268 514 aa13.57□□□□□ -0.24
LITAF-217ENST00000575426 GGT1P19440 569 aa13.57□□□□□ -0.24
LITAF-217ENST00000575426 TCN1P20061 433 aaPredicted RBP13.57□□□□□ -0.24
LITAF-217ENST00000575426 PEX19P40855 299 aa13.57□□□□□ -0.24
LITAF-217ENST00000575426 FBXL19-AS1Q494R0 122 aa13.57□□□□□ -0.24
LITAF-217ENST00000575426 SPATS1Q496A3 300 aa13.57□□□□□ -0.24
LITAF-217ENST00000575426 SWT1Q5T5J6 900 aaKnown RBP13.57□□□□□ -0.24
LITAF-217ENST00000575426 MEX3BQ6ZN04 569 aaKnown RBP13.57□□□□□ -0.24
LITAF-217ENST00000575426 DEF8Q6ZN54 512 aa13.57□□□□□ -0.24
LITAF-217ENST00000575426 CBLL1Q75N03 491 aa13.57□□□□□ -0.24
LITAF-217ENST00000575426 STK32CQ86UX6 486 aa13.57□□□□□ -0.24
LITAF-217ENST00000575426 RBM45Q8IUH3 476 aaKnown RBP13.57□□□□□ -0.24
LITAF-217ENST00000575426 TUSC5Q8IXB3 177 aa13.57□□□□□ -0.24
LITAF-217ENST00000575426 ADAMTS16Q8TE57 1224 aa13.57□□□□□ -0.24
LITAF-217ENST00000575426 EPYCQ99645 322 aa13.57□□□□□ -0.24
LITAF-217ENST00000575426 SLC24A3Q9HC58 644 aa13.57□□□□□ -0.24
LITAF-217ENST00000575426 FANCFQ9NPI8 374 aa13.57□□□□□ -0.24
LITAF-217ENST00000575426 JKAMPQ9P055 326 aa13.57□□□□□ -0.24
LITAF-217ENST00000575426 HECTD1Q9ULT8 2610 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 A0A087WUJ7 227 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 LIPT2A6NK58 231 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 A8MXE2 369 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 CHP2O43745 196 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 SERPINA1P01009 418 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 CD8BP10966 210 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 HSD17B1P14061 328 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 NCK1P16333 377 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 AGTR1P30556 359 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 RPS5P46782 204 aaKnown RBP13.56□□□□□ -0.24
LITAF-217ENST00000575426 OR1E2P47887 323 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 CDH12P55289 794 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 TAS2R41P59536 307 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 TFF3Q07654 80 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 GUSBP1Q15486 140 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 NPTX1Q15818 432 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 OTUD3Q5T2D3 398 aaPredicted RBP13.56□□□□□ -0.24
LITAF-217ENST00000575426 HIST2H2BCQ6DN03 193 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 TTC33Q6PID6 262 aaPredicted RBP13.56□□□□□ -0.24
LITAF-217ENST00000575426 PAQR6Q6TCH4 344 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 OR4D11Q8NGI4 311 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 MFSD8Q8NHS3 518 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 SLC25A36Q96CQ1 311 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 PSD2Q9BQI7 771 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 POLR2J2Q9GZM3 115 aaKnown RBP13.56□□□□□ -0.24
LITAF-217ENST00000575426 POLR2J3Q9H1A7 115 aaKnown RBP13.56□□□□□ -0.24
LITAF-217ENST00000575426 C12orf49Q9H741 205 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 PLSCR4Q9NRQ2 329 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 EMC3Q9P0I2 261 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 C6orf203Q9P0P8 240 aaPredicted RBP13.56□□□□□ -0.24
LITAF-217ENST00000575426 KLHL13Q9P2N7 655 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 MAGEL2Q9UJ55 1249 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 SLC7A7Q9UM01 511 aa13.56□□□□□ -0.24
LITAF-217ENST00000575426 FREM1Q5H8C1 2179 aa13.55□□□□□ -0.24
LITAF-217ENST00000575426 TRAV36DV7A0A075B6V5 113 aa13.55□□□□□ -0.24
LITAF-217ENST00000575426 GPR171O14626 319 aa13.55□□□□□ -0.24
LITAF-217ENST00000575426 HNRNPRO43390 633 aaKnown RBP13.55□□□□□ -0.24
LITAF-217ENST00000575426 NPIPB7O75200 414 aa13.55□□□□□ -0.24
LITAF-217ENST00000575426 TNFRSF1BP20333 461 aa13.55□□□□□ -0.24
LITAF-217ENST00000575426 CPOXP36551 454 aa13.55□□□□□ -0.24
LITAF-217ENST00000575426 PDK3Q15120 406 aa13.55□□□□□ -0.24
LITAF-217ENST00000575426 IFI44LQ53G44 452 aa13.55□□□□□ -0.24
LITAF-217ENST00000575426 TMEM225Q6GV28 225 aa13.55□□□□□ -0.24
LITAF-217ENST00000575426 RINLQ6ZS11 566 aa13.55□□□□□ -0.24
LITAF-217ENST00000575426 CCDC103Q8IW40 242 aa13.55□□□□□ -0.24
LITAF-217ENST00000575426 ARHGAP24Q8N264 748 aa13.55□□□□□ -0.24
LITAF-217ENST00000575426 ZNF610Q8N9Z0 462 aa13.55□□□□□ -0.24
LITAF-217ENST00000575426 FAM156AQ8NDB6 213 aa13.55□□□□□ -0.24
LITAF-217ENST00000575426 RBM15BQ8NDT2 890 aaKnown RBP13.55□□□□□ -0.24
LITAF-217ENST00000575426 GEMIN6Q8WXD5 167 aaKnown RBP13.55□□□□□ -0.24
LITAF-217ENST00000575426 KTI12Q96EK9 354 aaPredicted RBP13.55□□□□□ -0.24
LITAF-217ENST00000575426 MPP4Q96JB8 637 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms