RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 SLC35D3Q5M8T2 416 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 BCL2L15Q5TBC7 163 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 MCATQ8IVS2 390 aaKnown RBP8.2□□□□□ -1.1
NCBP3-204ENST00000574911 OR4D9Q8NGE8 314 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 OR51L1Q8NGJ5 315 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 RPLP0P6Q8NHW5 317 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 RPS4Y2Q8TD47 263 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 G6PC3Q9BUM1 346 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 NMNAT2Q9BZQ4 307 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 CCDC86Q9H6F5 360 aaKnown RBP8.2□□□□□ -1.1
NCBP3-204ENST00000574911 HCN3Q9P1Z3 774 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 COPS3Q9UNS2 423 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 CAMK2AQ9UQM7 478 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 CLDN16Q9Y5I7 305 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 NUBP2Q9Y5Y2 271 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 A0A0B4J203 849 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 SERINC4A6NH21 518 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 LRRN3E7EW58 273 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 PRAMEF26H0Y7S4 382 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 ARPC3O15145 178 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 GSTZ1O43708 216 aaPredicted RBP8.2□□□□□ -1.1
NCBP3-204ENST00000574911 OR2B3O76000 313 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 OR7A10O76100 309 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 IGHV4-34P06331 123 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 CT45A8P0DMV1 189 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 CT45A9P0DMV2 189 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 RNH1P13489 461 aaKnown RBP8.2□□□□□ -1.1
NCBP3-204ENST00000574911 TYRP1P17643 537 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 STX4Q12846 297 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 PON3Q15166 354 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 NDUFAF6Q330K2 333 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 CCDC58Q4VC31 144 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 CT45A2Q5DJT8 189 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 ZNF542PQ5EBM4 170 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 LYPD4Q6UWN0 246 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 BAIAP2L2Q6UXY1 529 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 TAF8Q7Z7C8 310 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 SYT9Q86SS6 491 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 SIAH3Q8IW03 269 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 ZNF595Q8IYB9 648 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 FRMD1Q8N878 549 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 BMPERQ8N8U9 685 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 C19orf47Q8N9M1 422 aaKnown RBP8.2□□□□□ -1.1
NCBP3-204ENST00000574911 SNX33Q8WV41 574 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 RBM18Q96H35 190 aaKnown RBP8.2□□□□□ -1.1
NCBP3-204ENST00000574911 CMTM3Q96MX0 182 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 NDEL1Q9GZM8 345 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 LRRN3Q9H3W5 708 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 Q9N2J8 555 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 NRIP3Q9NQ35 241 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 LRIT1Q9P2V4 623 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 SPATA2Q9UM82 520 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 ZNF337Q9Y3M9 751 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 ADAM18Q9Y3Q7 739 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 PIAS3Q9Y6X2 628 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 TRBV2A0A0J9YWF9 115 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 BLACEA4D250 179 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 OR6C68A6NDL8 312 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 IMPA2O14732 288 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 CTDSPLO15194 276 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 TPD52L2O43399 206 aaKnown RBP8.19□□□□□ -1.1
NCBP3-204ENST00000574911 SELENOFO60613 162 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 PRAMEF2O60811 474 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 CD3GP09693 182 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 SPI1P17947 270 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 EDNRAP25101 427 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 GPR3P46089 330 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 DGCR2P98153 550 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 DLX2Q07687 328 aaPredicted RBP8.19□□□□□ -1.1
NCBP3-204ENST00000574911 ZNF267Q14586 743 aaPredicted RBP8.19□□□□□ -1.1
NCBP3-204ENST00000574911 ARMC6Q6NXE6 501 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 KRT74Q7RTS7 529 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 TOMM5Q8N4H5 51 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 BCORP1Q8N888 145 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 ZPLD1Q8TCW7 415 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 PHYHIPQ92561 330 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 HYLS1Q96M11 299 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 NECTIN4Q96NY8 510 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 DGAT2Q96PD7 388 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 NMNAT3Q96T66 252 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 MED28Q9H204 178 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 BRD7Q9NPI1 651 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 PRTFDC1Q9NRG1 225 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 GNG8Q9UK08 70 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 AK6Q9Y3D8 172 aaKnown RBP8.19□□□□□ -1.1
NCBP3-204ENST00000574911 PCDHGA9Q9Y5G4 932 aaKnown RBP8.19□□□□□ -1.1
NCBP3-204ENST00000574911 SCN2AQ99250 2005 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 ERVH48-1M5A8F1 160 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 GPRIN2O60269 458 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 CSTAP01040 98 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 TCRBP04435 133 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 RPL4P36578 427 aaKnown RBP8.19□□□□□ -1.1
NCBP3-204ENST00000574911 SNRPD2P62316 118 aaKnown RBP8.19□□□□□ -1.1
NCBP3-204ENST00000574911 RPS4XP62701 263 aaKnown RBP8.19□□□□□ -1.1
NCBP3-204ENST00000574911 HHEXQ03014 270 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 HSF2Q03933 536 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 FZD2Q14332 565 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.19□□□□□ -1.1
NCBP3-204ENST00000574911 HSD17B12Q53GQ0 312 aa8.19□□□□□ -1.1
NCBP3-204ENST00000574911 FAM205BPQ63HN1 556 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms