RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 COL19A1Q14993 1142 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 EOGTQ5NDL2 527 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 C1orf94Q6P1W5 598 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 TPRG1Q6ZUI0 275 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 NAA40Q86UY6 237 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 GJD3Q8N144 294 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 OR2AP1Q8NGE2 309 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 OR51A7Q8NH64 312 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 BADQ92934 168 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 OR14A2Q96R54 314 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 CD180Q99467 661 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 MKL2Q9ULH7 1088 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 PCDHB10Q9UN67 800 aa8.87□□□□□ -0.99
CCDC40-212ENST00000574799 ACOT7O00154 380 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 PSMD9O00233 223 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 SLC16A5O15375 505 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 RPP14O95059 124 aaKnown RBP8.86□□□□□ -0.99
CCDC40-212ENST00000574799 HTR3BO95264 441 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 C1GALT1C1LP0DN25 315 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 MNDAP41218 407 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 KHKP50053 298 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 PNLIPRP1P54315 467 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 SNRPD1P62314 119 aaKnown RBP8.86□□□□□ -0.99
CCDC40-212ENST00000574799 KLF9Q13886 244 aaPredicted RBP8.86□□□□□ -0.99
CCDC40-212ENST00000574799 TCEAL5Q5H9L2 206 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 C9orf152Q5JTZ5 239 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 C5orf46Q6UWT4 87 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 TBC1D19Q8N5T2 526 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 POGLUT1Q8NBL1 392 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 OR2AK2Q8NG84 335 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 ACOT11Q8WXI4 607 aaPredicted RBP8.86□□□□□ -0.99
CCDC40-212ENST00000574799 FBXO17Q96EF6 278 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 F2RL3Q96RI0 385 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 WDR77Q9BQA1 342 aaPredicted RBP8.86□□□□□ -0.99
CCDC40-212ENST00000574799 MRPS30Q9NP92 439 aaKnown RBP8.86□□□□□ -0.99
CCDC40-212ENST00000574799 MYNNQ9NPC7 610 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 OR2S2Q9NQN1 319 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 DZANK1Q9NVP4 752 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 OPN4Q9UHM6 478 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 ENTPD4Q9Y227 616 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 CDHR4A6H8M9 788 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 ACOD1A6NK06 481 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 RECKO95980 971 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 CKMP06732 381 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 C8orf89P0DMQ9 161 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 EPXP11678 715 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 PSMB10P40306 273 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 AQP2P41181 271 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 PPT1P50897 306 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 RAB2AP61019 212 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 FAM76BQ5HYJ3 339 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 UBE2NLQ5JXB2 153 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 C22orf39Q6P5X5 142 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 TMEM71Q6P5X7 295 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 SPICQ8N5J4 248 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 LILRA3Q8N6C8 439 aaPredicted RBP8.86□□□□□ -0.99
CCDC40-212ENST00000574799 C17orf47Q8NEP4 570 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 OR1S2Q8NGQ3 325 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 OR51Q1Q8NH59 317 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 CCDC107Q8WV48 283 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 TCTEX1D2Q8WW35 142 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 VRK1Q99986 396 aaPredicted RBP8.86□□□□□ -0.99
CCDC40-212ENST00000574799 DPH1Q9BZG8 443 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 GSN-AS1Q9NRJ2 163 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 NDOR1Q9UHB4 597 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 TMEM202A6NGA9 273 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 SLC22A31A6NKX4 558 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 KDM4EB2RXH2 506 aaPredicted RBP8.86□□□□□ -0.99
CCDC40-212ENST00000574799 WASH3PC4AMC7 463 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 C5orf67F2Z3F1 127 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 GABARAPH6UMI1 98 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 M0R036 132 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 OIP5O43482 229 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 ANXA2P07355 339 aaKnown RBP8.86□□□□□ -0.99
CCDC40-212ENST00000574799 PTGFRP43088 359 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 EPHA4P54764 986 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 SNTB1Q13884 538 aaKnown RBP8.86□□□□□ -0.99
CCDC40-212ENST00000574799 RBMS2Q15434 407 aaKnown RBP8.86□□□□□ -0.99
CCDC40-212ENST00000574799 EIF2S3LQ2VIR3 472 aaKnown RBP8.86□□□□□ -0.99
CCDC40-212ENST00000574799 TMEM220Q6QAJ8 160 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 RBMS3Q6XE24 437 aaKnown RBP8.86□□□□□ -0.99
CCDC40-212ENST00000574799 LDLRAD3Q86YD5 345 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 DCUN1D3Q8IWE4 304 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 SAMD14Q8IZD0 417 aaPredicted RBP8.86□□□□□ -0.99
CCDC40-212ENST00000574799 OR6K6Q8NGW6 343 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 OR4Q3Q8NH05 313 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 NEURL3Q96EH8 262 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 C14orf79Q96F83 325 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 ZNF75AQ96N20 296 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 BCL2L14Q9BZR8 327 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 ZCCHC4Q9H5U6 513 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 ACSS1Q9NUB1 689 aaPredicted RBP8.86□□□□□ -0.99
CCDC40-212ENST00000574799 TAAR2Q9P1P5 351 aa8.86□□□□□ -0.99
CCDC40-212ENST00000574799 WDFY4Q6ZS81 3184 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 LINC01553A4QN01 128 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 C5orf51A6NDU8 294 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 MPTX1A8MV57 137 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 HMGN4O00479 90 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 GRM6O15303 877 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 RHOP08100 348 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms