RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 GNG8Q9UK08 70 aa13.29□□□□□ -0.28
SMG6-215ENST00000574501 K7ESM1 405 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 MAN2B1O00754 1011 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 LCMT2O60294 686 aaKnown RBP13.28□□□□□ -0.28
SMG6-215ENST00000574501 EIF3GO75821 320 aaKnown RBP eCLIP13.28□□□□□ -0.28
SMG6-215ENST00000574501 MC3RP41968 323 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 ANXA11P50995 505 aaKnown RBP13.28□□□□□ -0.28
SMG6-215ENST00000574501 MECP2P51608 486 aaKnown RBP13.28□□□□□ -0.28
SMG6-215ENST00000574501 SIRPAP78324 504 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 PCGF3Q3KNV8 242 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 ASTLQ6HA08 431 aaPredicted RBP13.28□□□□□ -0.28
SMG6-215ENST00000574501 ZNF793Q6ZN11 406 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 NR4A3Q92570 626 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 CNRIP1Q96F85 164 aaPredicted RBP13.28□□□□□ -0.28
SMG6-215ENST00000574501 MS4A4EQ96PG1 132 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 AIF1LQ9BQI0 150 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 OR5V1Q9UGF6 321 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 DENND4CQ5VZ89 1909 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 DNAH14Q0VDD8 3507 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 A0A087WV48 116 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 TRAV14DV4A0A0A6YYC5 116 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 CENPVL1A0A0U1RR11 272 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 MEIS3P1A6NDR6 274 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 PSMD9O00233 223 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 OGG1O15527 345 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 RPLP2P05387 115 aaKnown RBP13.28□□□□□ -0.28
SMG6-215ENST00000574501 GP1BAP07359 652 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 GKN3PP0CG01 181 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 UBBP0CG47 229 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 UBCP0CG48 685 aaKnown RBP13.28□□□□□ -0.28
SMG6-215ENST00000574501 TIMP2P16035 220 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 MGMTP16455 207 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 ADCYAP1P18509 176 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 PRMT2P55345 433 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 TAS2R20P59543 309 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 RPS27AP62979 156 aaKnown RBP13.28□□□□□ -0.28
SMG6-215ENST00000574501 UBA52P62987 128 aaKnown RBP13.28□□□□□ -0.28
SMG6-215ENST00000574501 FKBP1BP68106 108 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 KRT33BQ14525 404 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 C4orf46Q504U0 113 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 OR4C11Q6IEV9 310 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 PWWP2BQ6NUJ5 590 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 LCTLQ6UWM7 567 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 CAMKVQ8NCB2 501 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 OR4C16Q8NGL9 310 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 ZDHHC5Q9C0B5 715 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 SLC25A13Q9UJS0 675 aa13.28□□□□□ -0.28
SMG6-215ENST00000574501 LSM7Q9UK45 103 aaKnown RBP13.28□□□□□ -0.28
SMG6-215ENST00000574501 IDSB3KWA1 339 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 NEDD8-MDP1E9PL57 170 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 ACOT7O00154 380 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 AKR7A3O95154 331 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 RFC3P40938 356 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 PLA2G7Q13093 441 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 RBMS2Q15434 407 aaKnown RBP13.27□□□□□ -0.29
SMG6-215ENST00000574501 NDUFAF6Q330K2 333 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 SLC16A13Q7RTY0 426 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 C12orf45Q8N5I9 185 aaPredicted RBP13.27□□□□□ -0.29
SMG6-215ENST00000574501 NUP43Q8NFH3 380 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 OR1M1Q8NGA1 313 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 OR1S2Q8NGQ3 325 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 OR14A16Q8NHC5 309 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 DUSP19Q8WTR2 217 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 SFT2D1Q8WV19 159 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 RAD51AP1Q96B01 352 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 OTUB2Q96DC9 234 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 MNTQ99583 582 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 PRSS27Q9BQR3 290 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 CRB3Q9BUF7 120 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 KLHL31Q9H511 634 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 SYNPO2LQ9H987 977 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 CLDND1Q9NY35 253 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 TMEM218A2RU14 115 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 RFPL4AA6NLU0 287 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 RIIAD1A6NNX1 92 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 RFPL4AL1F8VTS6 287 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 PPP1R3DO95685 299 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 SLC2A5P22732 501 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 MAPK3P27361 379 aaPredicted RBP13.27□□□□□ -0.29
SMG6-215ENST00000574501 ELAVL2Q12926 359 aaKnown RBP13.27□□□□□ -0.29
SMG6-215ENST00000574501 SMAD2Q15796 467 aaKnown RBP13.27□□□□□ -0.29
SMG6-215ENST00000574501 CCDC157Q569K6 752 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 OR2W3Q7Z3T1 314 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 SVBPQ8N300 66 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 EID2Q8N6I1 236 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 OR9A2Q8NGT5 310 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 SNX33Q8WV41 574 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 CMTM3Q96MX0 182 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 KRCC1Q9NPI7 259 aaPredicted RBP13.27□□□□□ -0.29
SMG6-215ENST00000574501 SPG21Q9NZD8 308 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 PCDHB10Q9UN67 800 aa13.27□□□□□ -0.29
SMG6-215ENST00000574501 TCF20Q9UGU0 1960 aaKnown RBP13.26□□□□□ -0.29
SMG6-215ENST00000574501 PLXNA2O75051 1894 aa13.26□□□□□ -0.29
SMG6-215ENST00000574501 ZNF879B4DU55 563 aa13.26□□□□□ -0.29
SMG6-215ENST00000574501 KPNA3O00505 521 aaPredicted RBP13.26□□□□□ -0.29
SMG6-215ENST00000574501 SGCEO43556 437 aa13.26□□□□□ -0.29
SMG6-215ENST00000574501 LILRB5O75023 590 aa13.26□□□□□ -0.29
SMG6-215ENST00000574501 SLC25A12O75746 678 aa13.26□□□□□ -0.29
SMG6-215ENST00000574501 FABP1P07148 127 aa13.26□□□□□ -0.29
SMG6-215ENST00000574501 ACAA1P09110 424 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms