RNA–Protein interactions for RNA: ENST00000574151.5

HCFC1R1-206, Transcript of host cell factor C1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC1R1, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-206ENST00000574151 SRSF2Q01130 221 aaKnown RBP9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 ST3GAL4Q11206 333 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 MLLT11Q13015 90 aaPredicted RBP9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 CBX3Q13185 183 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 TP53BP2Q13625 1128 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 NDUFA5Q16718 116 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 ARMCX4Q5H9R4 360 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 MRM1Q6IN84 353 aaKnown RBP9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 SLC48A1Q6P1K1 146 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 ZNF793Q6ZN11 406 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 QSOX2Q6ZRP7 698 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 NDUFAF7Q7L592 441 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 PRSS41Q7RTY9 318 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 SLC43A2Q8N370 569 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 ARHGEF39Q8N4T4 335 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 AMER3Q8N944 861 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 AQP11Q8NBQ7 271 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 OR5T3Q8NGG3 340 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 NDNFQ8TB73 568 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 RNF217Q8TC41 542 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 GGHQ92820 318 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 DAZLQ92904 295 aaKnown RBP9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 RFKQ969G6 155 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 TP53INP1Q96A56 240 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 TMEM80Q96HE8 168 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 SLC35G5Q96KT7 338 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 ART5Q96L15 291 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 FRMD6Q96NE9 622 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 WDFY2Q96P53 400 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 DGAT2Q96PD7 388 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 SIGLEC12Q96PQ1 595 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 SLC38A2Q96QD8 506 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 ALOXE3Q9BYJ1 711 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 ACER3Q9NUN7 267 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 MED17Q9NVC6 651 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 ANKRD10Q9NXR5 420 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 KLHL28Q9NXS3 571 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 ZNF229Q9UJW7 825 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 SLC13A4Q9UKG4 626 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 GRIP1Q9Y3R0 1128 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 CLCA3PQ9Y6N3 262 aa9.13□□□□□ -0.95
HCFC1R1-206ENST00000574151 CR1P17927 2039 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 VSTM2BA6NLU5 285 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 J3QRK9 145 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 CYR61O00622 381 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 TMPRSS11DO60235 418 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 SMPD2O60906 423 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 CDC123O75794 336 aaPredicted RBP9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 MFN2O95140 757 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 LGI1O95970 557 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 B3GALT4O96024 378 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 SLC35E2P0CK97 266 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 TRAPPC2P0DI81 140 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 TRAPPC2BP0DI82 140 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 COX6A1P12074 109 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 MYL12AP19105 171 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 CHMP24386 653 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 PTBP1P26599 531 aaKnown RBP eCLIP9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 GPC1P35052 558 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 SLC15A1P46059 708 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 KCNJ5P48544 419 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 CRYBA2P53672 197 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 PTGES3Q15185 160 aaKnown RBP9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 SYT16Q17RD7 645 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 FLYWCH1Q4VC44 716 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 ZNF385BQ569K4 471 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 RNFT1Q5M7Z0 435 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 ARMC4Q5T2S8 1044 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 C12orf73Q69YU5 71 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 HIST2H2BDQ6DRA6 164 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 COX15Q7KZN9 410 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 GALNTL5Q7Z4T8 443 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 LIX1LQ8IVB5 337 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 TXNDC15Q96J42 360 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 PRRC1Q96M27 445 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 LPAR4Q99677 370 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 MGLLQ99685 303 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 PINK1Q9BXM7 581 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 NUAK2Q9H093 628 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 SYNPO2LQ9H987 977 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 NMNAT1Q9HAN9 279 aaPredicted RBP9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 SLC25A19Q9HC21 320 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 SLC35C2Q9NQQ7 365 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 GPATCH2Q9NW75 528 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 SSR3Q9UNL2 185 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 IFT52Q9Y366 437 aa9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 EXOSC1Q9Y3B2 195 aaKnown RBP9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 GPC6Q9Y625 555 aaPredicted RBP9.12□□□□□ -0.95
HCFC1R1-206ENST00000574151 IQCMA0A1B0GVH7 501 aa9.11□□□□□ -0.95
HCFC1R1-206ENST00000574151 GLOD5A6NK44 160 aa9.11□□□□□ -0.95
HCFC1R1-206ENST00000574151 PGRMC2O15173 223 aa9.11□□□□□ -0.95
HCFC1R1-206ENST00000574151 OR10H3O60404 316 aa9.11□□□□□ -0.95
HCFC1R1-206ENST00000574151 CDC40O60508 579 aaKnown RBP eCLIP9.11□□□□□ -0.95
HCFC1R1-206ENST00000574151 DIRAS1O95057 198 aa9.11□□□□□ -0.95
HCFC1R1-206ENST00000574151 RAB36O95755 333 aa9.11□□□□□ -0.95
HCFC1R1-206ENST00000574151 AIFM1O95831 613 aa9.11□□□□□ -0.95
HCFC1R1-206ENST00000574151 IL1AP01583 271 aa9.11□□□□□ -0.95
HCFC1R1-206ENST00000574151 BCHEP06276 602 aa9.11□□□□□ -0.95
HCFC1R1-206ENST00000574151 NUDT7P0C024 238 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms