RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 CCM2LQ9NUG4 571 aaPredicted RBP12.18□□□□□ -0.46
NDE1-209ENST00000574109 TINAGQ9UJW2 476 aa12.18□□□□□ -0.46
NDE1-209ENST00000574109 OSGIN2Q9Y236 505 aa12.18□□□□□ -0.46
NDE1-209ENST00000574109 TMEM5Q9Y2B1 443 aa12.18□□□□□ -0.46
NDE1-209ENST00000574109 MED31Q9Y3C7 131 aa12.18□□□□□ -0.46
NDE1-209ENST00000574109 CORINQ9Y5Q5 1042 aa12.18□□□□□ -0.46
NDE1-209ENST00000574109 PCNX1Q96RV3 2341 aa12.17□□□□□ -0.46
NDE1-209ENST00000574109 MBD3L4A6NDZ8 208 aaPredicted RBP12.17□□□□□ -0.46
NDE1-209ENST00000574109 MBD3L3A6NE82 208 aaPredicted RBP12.17□□□□□ -0.46
NDE1-209ENST00000574109 MBD3L5A6NJ08 208 aaPredicted RBP12.17□□□□□ -0.46
NDE1-209ENST00000574109 SLC22A20A6NK97 555 aa12.17□□□□□ -0.46
NDE1-209ENST00000574109 EFNA2O43921 213 aa12.17□□□□□ -0.46
NDE1-209ENST00000574109 LYPD3O95274 346 aa12.17□□□□□ -0.46
NDE1-209ENST00000574109 IL11P20809 199 aa12.17□□□□□ -0.46
NDE1-209ENST00000574109 GNLYP22749 145 aa12.17□□□□□ -0.46
NDE1-209ENST00000574109 TIMP3P35625 211 aa12.17□□□□□ -0.46
NDE1-209ENST00000574109 CARD18P57730 90 aa12.17□□□□□ -0.46
NDE1-209ENST00000574109 NUP107P57740 925 aa12.17□□□□□ -0.46
NDE1-209ENST00000574109 RNPS1Q15287 305 aaKnown RBP12.17□□□□□ -0.46
NDE1-209ENST00000574109 C3AR1Q16581 482 aa12.17□□□□□ -0.46
NDE1-209ENST00000574109 FGD3Q5JSP0 725 aa12.17□□□□□ -0.46
NDE1-209ENST00000574109 GTF2IRD2BQ6EKJ0 949 aa12.17□□□□□ -0.46
NDE1-209ENST00000574109 PAQR6Q6TCH4 344 aa12.17□□□□□ -0.46
NDE1-209ENST00000574109 RRM2BQ7LG56 351 aa12.17□□□□□ -0.46
NDE1-209ENST00000574109 P4HA3Q7Z4N8 544 aa12.17□□□□□ -0.46
NDE1-209ENST00000574109 GTF2IRD2Q86UP8 949 aa12.17□□□□□ -0.46
NDE1-209ENST00000574109 DOLPP1Q86YN1 238 aa12.17□□□□□ -0.46
NDE1-209ENST00000574109 SCAIQ8N9R8 606 aa12.17□□□□□ -0.46
NDE1-209ENST00000574109 PAPD5Q8NDF8 572 aaKnown RBP12.17□□□□□ -0.46
NDE1-209ENST00000574109 ADPRHL1Q8NDY3 354 aa12.17□□□□□ -0.46
NDE1-209ENST00000574109 ATP6V1C2Q8NEY4 427 aa12.17□□□□□ -0.46
NDE1-209ENST00000574109 MBD3L2Q8NHZ7 208 aaPredicted RBP12.17□□□□□ -0.46
NDE1-209ENST00000574109 PIGXQ8TBF5 258 aa12.17□□□□□ -0.46
NDE1-209ENST00000574109 CANT1Q8WVQ1 401 aa12.17□□□□□ -0.46
NDE1-209ENST00000574109 NAA11Q9BSU3 229 aaPredicted RBP12.17□□□□□ -0.46
NDE1-209ENST00000574109 OR11A1Q9GZK7 315 aa12.17□□□□□ -0.46
NDE1-209ENST00000574109 FKRPQ9H9S5 495 aa12.17□□□□□ -0.46
NDE1-209ENST00000574109 NMNAT1Q9HAN9 279 aaPredicted RBP12.17□□□□□ -0.46
NDE1-209ENST00000574109 TNFRSF10DQ9UBN6 386 aa12.17□□□□□ -0.46
NDE1-209ENST00000574109 RALYQ9UKM9 306 aaKnown RBP12.17□□□□□ -0.46
NDE1-209ENST00000574109 IGKV1D-42A0A075B6H8 117 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 LIPT2A6NK58 231 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 J3QKU1 62 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 FFAR1O14842 300 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 CXCL13O43927 109 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 FKBP6O75344 327 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 DEAF1O75398 565 aaPredicted RBP12.16□□□□□ -0.46
NDE1-209ENST00000574109 WISP2O76076 250 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 GADD45GO95257 159 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 MT-ND1P03886 318 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 THY1P04216 161 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 CRHP06850 196 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 PLA2G2AP14555 144 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 CCNA2P20248 432 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 ENPP1P22413 925 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 SHC1P29353 583 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 IFNGR2P38484 337 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 SUCLG1P53597 346 aaKnown RBP12.16□□□□□ -0.46
NDE1-209ENST00000574109 EGR4Q05215 589 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 PON3Q15166 354 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 IQCCQ4KMZ1 466 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 RIPPLY2Q5TAB7 128 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 ABLIM2Q6H8Q1 611 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 OR2T5Q6IEZ7 315 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 ZNF730Q6ZMV8 503 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 TSPYL5Q86VY4 417 aaPredicted RBP12.16□□□□□ -0.46
NDE1-209ENST00000574109 OR2T29Q8NH02 315 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 RNF128Q8TEB7 428 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 OSTF1Q92882 214 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 ARL5BQ96KC2 179 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 TRIB1Q96RU8 372 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 PRSS27Q9BQR3 290 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 PRR14Q9BWN1 585 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 CHID1Q9BWS9 393 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 ASPNQ9BXN1 380 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 PRRG4Q9BZD6 226 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 NDEL1Q9GZM8 345 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 REEP1Q9H902 201 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 MAN2C1Q9NTJ4 1040 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 ARMC1Q9NVT9 282 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 EMC3Q9P0I2 261 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 KLHL9Q9P2J3 617 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 ZNF229Q9UJW7 825 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 TMCC3Q9ULS5 477 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 MEMO1Q9Y316 297 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 FAM215AQ9Y5M1 114 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 FLNCQ14315 2725 aa12.16□□□□□ -0.46
NDE1-209ENST00000574109 A0A1W2PNR3 127 aa12.15□□□□□ -0.46
NDE1-209ENST00000574109 ZC3H12DA2A288 527 aaKnown RBP12.15□□□□□ -0.46
NDE1-209ENST00000574109 J3KTA2 159 aa12.15□□□□□ -0.46
NDE1-209ENST00000574109 HNRNPRO43390 633 aaKnown RBP12.15□□□□□ -0.46
NDE1-209ENST00000574109 VAMP5O95183 116 aa12.15□□□□□ -0.46
NDE1-209ENST00000574109 CST1P01037 141 aa12.15□□□□□ -0.46
NDE1-209ENST00000574109 IL2RAP01589 272 aa12.15□□□□□ -0.46
NDE1-209ENST00000574109 RRM2P31350 389 aa12.15□□□□□ -0.46
NDE1-209ENST00000574109 YAP1P46937 504 aaKnown RBP12.15□□□□□ -0.46
NDE1-209ENST00000574109 UQCRFS1P47985 274 aa12.15□□□□□ -0.46
NDE1-209ENST00000574109 AGFG1P52594 562 aaKnown RBP12.15□□□□□ -0.46
NDE1-209ENST00000574109 OR2B6P58173 313 aa12.15□□□□□ -0.46
NDE1-209ENST00000574109 CCNIQ14094 377 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms