RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 NAA11Q9BSU3 229 aaPredicted RBP9.87□□□□□ -0.83
CHD3-216ENST00000573936 C1orf21Q9H246 121 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 GP6Q9HCN6 339 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 RPS6KA6Q9UK32 745 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 EMC9Q9Y3B6 208 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 CACNA1CQ13936 2221 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 MTORP42345 2549 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 A0A0B4J2E0 115 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 A0A1B0GX12 115 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 A0A1W2PNV4 684 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 ERICH4A6NGS2 130 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 FAM90A27PA6NNH2 459 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 AQP8O94778 261 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 GPIP06744 558 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 BMP5P22003 454 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 HTR2AP28223 471 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 IDUAP35475 653 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 ASCL1P50553 236 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 AGFG1P52594 562 aaKnown RBP9.86□□□□□ -0.83
CHD3-216ENST00000573936 CRYBA2P53672 197 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 CTBP2P56545 445 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 OR2B6P58173 313 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 MYBPHQ13203 477 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 ENTPD8Q5MY95 495 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 PLXDC2Q6UX71 529 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 CARM1Q86X55 608 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 LIX1LQ8IVB5 337 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 OR6T1Q8NGN1 323 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 VANGL1Q8TAA9 524 aaPredicted RBP9.86□□□□□ -0.83
CHD3-216ENST00000573936 RNF217Q8TC41 542 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 ROBO4Q8WZ75 1007 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 PHF3Q92576 2039 aaKnown RBP9.86□□□□□ -0.83
CHD3-216ENST00000573936 SLC38A4Q969I6 547 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 TPD52L3Q96J77 140 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 ARL5BQ96KC2 179 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 BTBD10Q9BSF8 475 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 TAPBPLQ9BX59 468 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 SRXN1Q9BYN0 137 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 PCDHAC1Q9H158 963 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 LRMDAQ9H2I8 198 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 GORASP2Q9H8Y8 452 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 KLHL9Q9P2J3 617 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 CD300AQ9UGN4 299 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 MAGEL2Q9UJ55 1249 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 FOXD3Q9UJU5 478 aaPredicted RBP9.86□□□□□ -0.83
CHD3-216ENST00000573936 SH3GLB1Q9Y371 365 aa9.86□□□□□ -0.83
CHD3-216ENST00000573936 ZFHX3Q15911 3703 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 NF1P21359 2839 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 A0A087WUJ7 227 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 TRAPPC13A5PLN9 417 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 CPSF4LA6NMK7 179 aaKnown RBP9.85□□□□□ -0.83
CHD3-216ENST00000573936 TMEM229AB2RXF0 380 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 GYG2O15488 501 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 CHP2O43745 196 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 OR2T1O43869 369 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 TPST2O60704 377 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 CYTIPO60759 359 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 SS18L1O75177 396 aaPredicted RBP9.85□□□□□ -0.83
CHD3-216ENST00000573936 AHSA1O95433 338 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 ZNF682O95780 498 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 SERPINA1P01009 418 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 TCN1P20061 433 aaPredicted RBP9.85□□□□□ -0.83
CHD3-216ENST00000573936 PEX19P40855 299 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 KIR2DL2P43627 348 aaPredicted RBP9.85□□□□□ -0.83
CHD3-216ENST00000573936 RASGEF1BQ0VAM2 473 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 FOXF2Q12947 444 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 BNIP2Q12982 314 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 PDK3Q15120 406 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 NPTX1Q15818 432 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 TMEM201Q5SNT2 666 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 C1orf140Q5VVS0 124 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 FKBP9P1Q75LS8 142 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 ASRGL1Q7L266 308 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 FAM214BQ7L5A3 538 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 GCNT2Q8N0V5 402 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 RNF148Q8N7C7 305 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 CNEP1R1Q8N9A8 125 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 OR6K3Q8NGY3 331 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 OR6S1Q8NH40 331 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 PIGXQ8TBF5 258 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 RNF128Q8TEB7 428 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 GEMIN6Q8WXD5 167 aaKnown RBP9.85□□□□□ -0.83
CHD3-216ENST00000573936 MPP4Q96JB8 637 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 EPYCQ99645 322 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 WFDC6Q9BQY6 131 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 UCK2Q9BZX2 261 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 OR11A1Q9GZK7 315 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 GMPR2Q9P2T1 348 aaKnown RBP9.85□□□□□ -0.83
CHD3-216ENST00000573936 EGFL7Q9UHF1 273 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 PACSIN3Q9UKS6 424 aa9.85□□□□□ -0.83
CHD3-216ENST00000573936 PRPF19Q9UMS4 504 aaKnown RBP9.85□□□□□ -0.83
CHD3-216ENST00000573936 SAMD4AQ9UPU9 718 aaKnown RBP9.85□□□□□ -0.83
CHD3-216ENST00000573936 NCOA6Q14686 2063 aaPredicted RBP9.84□□□□□ -0.83
CHD3-216ENST00000573936 HEATR5AQ86XA9 2040 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 TRAV36DV7A0A075B6V5 113 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 ZC3H12DA2A288 527 aaKnown RBP9.84□□□□□ -0.83
CHD3-216ENST00000573936 NKX2-6A6NCS4 301 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 LIPT2A6NK58 231 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 EEF1E1-BLOC1S5C9J1V9 151 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 MSTNO14793 375 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms