RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 CLOCKO15516 846 aa15.71■□□□□ 0.11
CTDNEP1-207ENST00000572043 RAD51DO75771 328 aa15.71■□□□□ 0.11
CTDNEP1-207ENST00000572043 GPIP06744 558 aa15.71■□□□□ 0.11
CTDNEP1-207ENST00000572043 GPX2P18283 190 aa15.71■□□□□ 0.11
CTDNEP1-207ENST00000572043 PRKAR1BP31321 381 aa15.71■□□□□ 0.11
CTDNEP1-207ENST00000572043 MAP2K6P52564 334 aa15.71■□□□□ 0.11
CTDNEP1-207ENST00000572043 SLC16A1P53985 500 aa15.71■□□□□ 0.11
CTDNEP1-207ENST00000572043 NR1H2P55055 460 aa15.71■□□□□ 0.11
CTDNEP1-207ENST00000572043 ADAM8P78325 824 aa15.71■□□□□ 0.11
CTDNEP1-207ENST00000572043 FAPQ12884 760 aa15.71■□□□□ 0.11
CTDNEP1-207ENST00000572043 FOXD4Q12950 439 aaPredicted RBP15.71■□□□□ 0.11
CTDNEP1-207ENST00000572043 ADRM1Q16186 407 aa15.71■□□□□ 0.11
CTDNEP1-207ENST00000572043 CYP51A1Q16850 503 aa15.71■□□□□ 0.11
CTDNEP1-207ENST00000572043 C9orf135Q5VTT2 229 aa15.71■□□□□ 0.11
CTDNEP1-207ENST00000572043 FBXW9Q5XUX1 488 aa15.71■□□□□ 0.11
CTDNEP1-207ENST00000572043 GPAT4Q86UL3 456 aa15.71■□□□□ 0.11
CTDNEP1-207ENST00000572043 WFDC11Q8NEX6 87 aa15.71■□□□□ 0.11
CTDNEP1-207ENST00000572043 OR52E4Q8NGH9 312 aa15.71■□□□□ 0.11
CTDNEP1-207ENST00000572043 HSD17B8Q92506 261 aa15.71■□□□□ 0.11
CTDNEP1-207ENST00000572043 CGREF1Q99674 301 aa15.71■□□□□ 0.11
CTDNEP1-207ENST00000572043 TAPBPLQ9BX59 468 aa15.71■□□□□ 0.11
CTDNEP1-207ENST00000572043 BEX4Q9NWD9 120 aaPredicted RBP15.71■□□□□ 0.11
CTDNEP1-207ENST00000572043 RPS6KB2Q9UBS0 482 aa15.71■□□□□ 0.11
CTDNEP1-207ENST00000572043 AKAP9Q99996 3911 aa15.71■□□□□ 0.1
CTDNEP1-207ENST00000572043 ANKHD1Q8IWZ3 2542 aaKnown RBP15.7■□□□□ 0.1
CTDNEP1-207ENST00000572043 HEATR5AQ86XA9 2040 aa15.7■□□□□ 0.1
CTDNEP1-207ENST00000572043 CCT8L1PA6NM43 557 aa15.7■□□□□ 0.1
CTDNEP1-207ENST00000572043 SMPD2O60906 423 aa15.7■□□□□ 0.1
CTDNEP1-207ENST00000572043 VIMP08670 466 aaKnown RBP15.7■□□□□ 0.1
CTDNEP1-207ENST00000572043 TROVE2P10155 538 aaKnown RBP eCLIP15.7■□□□□ 0.1
CTDNEP1-207ENST00000572043 HTR2AP28223 471 aa15.7■□□□□ 0.1
CTDNEP1-207ENST00000572043 FOXG1P55316 489 aaPredicted RBP15.7■□□□□ 0.1
CTDNEP1-207ENST00000572043 GUCY1A3Q02108 690 aa15.7■□□□□ 0.1
CTDNEP1-207ENST00000572043 SLC17A1Q14916 467 aa15.7■□□□□ 0.1
CTDNEP1-207ENST00000572043 C1orf140Q5VVS0 124 aa15.7■□□□□ 0.1
CTDNEP1-207ENST00000572043 PAQR6Q6TCH4 344 aa15.7■□□□□ 0.1
CTDNEP1-207ENST00000572043 HIPK4Q8NE63 616 aa15.7■□□□□ 0.1
CTDNEP1-207ENST00000572043 RNF217Q8TC41 542 aa15.7■□□□□ 0.1
CTDNEP1-207ENST00000572043 AKAP1Q92667 903 aaKnown RBP eCLIP15.7■□□□□ 0.1
CTDNEP1-207ENST00000572043 SLC25A36Q96CQ1 311 aa15.7■□□□□ 0.1
CTDNEP1-207ENST00000572043 ANKRD27Q96NW4 1050 aa15.7■□□□□ 0.1
CTDNEP1-207ENST00000572043 SPATA5L1Q9BVQ7 753 aa15.7■□□□□ 0.1
CTDNEP1-207ENST00000572043 TMEM38AQ9H6F2 299 aa15.7■□□□□ 0.1
CTDNEP1-207ENST00000572043 SLC13A4Q9UKG4 626 aa15.7■□□□□ 0.1
CTDNEP1-207ENST00000572043 ANGPT4Q9Y264 503 aa15.7■□□□□ 0.1
CTDNEP1-207ENST00000572043 FLVCR1Q9Y5Y0 555 aa15.7■□□□□ 0.1
CTDNEP1-207ENST00000572043 A0A1W2PR80 420 aa15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 CIB4A0PJX0 185 aa15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 ELOA3DA6NLF2 546 aaPredicted RBP15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 AHSA1O95433 338 aa15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 OPN1SWP03999 348 aa15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 GGT1P19440 569 aa15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 COX5AP20674 150 aa15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 PTNP21246 168 aa15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 ARFIP2P53365 341 aa15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 NKX6-1P78426 367 aaPredicted RBP15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 ELOA3BQ3SY89 546 aa15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 CGB2Q6NT52 195 aa15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 DHRS4L2Q6PKH6 230 aa15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 C20orf204Q6ZNR8 217 aa15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 P3H2Q8IVL5 708 aa15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 DPP10Q8N608 796 aa15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 ZNF433Q8N7K0 673 aaPredicted RBP15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 SMYD1Q8NB12 490 aa15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 ELOA3Q8NG57 546 aa15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 PIGTQ969N2 578 aa15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 ZNF385AQ96PM9 386 aaKnown RBP15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 ZNF607Q96SK3 696 aa15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 TMUB1Q9BVT8 246 aa15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 PIF1Q9H611 641 aa15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 ASB6Q9NWX5 421 aa15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 UPB1Q9UBR1 384 aa15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 SLC9A8Q9Y2E8 581 aa15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 GMEB1Q9Y692 573 aa15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 MPDZO75970 2070 aa15.69■□□□□ 0.1
CTDNEP1-207ENST00000572043 A0A1B0GWA3 101 aa15.68■□□□□ 0.1
CTDNEP1-207ENST00000572043 AQP7P3A6NL99 342 aa15.68■□□□□ 0.1
CTDNEP1-207ENST00000572043 TMEM229AB2RXF0 380 aa15.68■□□□□ 0.1
CTDNEP1-207ENST00000572043 CD3EP07766 207 aa15.68■□□□□ 0.1
CTDNEP1-207ENST00000572043 RPS5P46782 204 aaKnown RBP15.68■□□□□ 0.1
CTDNEP1-207ENST00000572043 RGS8P57771 180 aaPredicted RBP15.68■□□□□ 0.1
CTDNEP1-207ENST00000572043 NCALDP61601 193 aa15.68■□□□□ 0.1
CTDNEP1-207ENST00000572043 DMTNQ08495 405 aa15.68■□□□□ 0.1
CTDNEP1-207ENST00000572043 PPA1Q15181 289 aa15.68■□□□□ 0.1
CTDNEP1-207ENST00000572043 HSP90B2PQ58FF3 399 aa15.68■□□□□ 0.1
CTDNEP1-207ENST00000572043 NCMAPQ5T1S8 102 aa15.68■□□□□ 0.1
CTDNEP1-207ENST00000572043 METTL21CQ5VZV1 264 aa15.68■□□□□ 0.1
CTDNEP1-207ENST00000572043 TMEM225Q6GV28 225 aa15.68■□□□□ 0.1
CTDNEP1-207ENST00000572043 PTOV1Q86YD1 416 aa15.68■□□□□ 0.1
CTDNEP1-207ENST00000572043 ARMC8Q8IUR7 673 aa15.68■□□□□ 0.1
CTDNEP1-207ENST00000572043 C11orf65Q8NCR3 313 aa15.68■□□□□ 0.1
CTDNEP1-207ENST00000572043 OR9K2Q8NGE7 335 aa15.68■□□□□ 0.1
CTDNEP1-207ENST00000572043 OR52N5Q8NH56 324 aa15.68■□□□□ 0.1
CTDNEP1-207ENST00000572043 NEUROG1Q92886 237 aa15.68■□□□□ 0.1
CTDNEP1-207ENST00000572043 MUCL1Q96DR8 90 aa15.68■□□□□ 0.1
CTDNEP1-207ENST00000572043 KTI12Q96EK9 354 aaPredicted RBP15.68■□□□□ 0.1
CTDNEP1-207ENST00000572043 PERPQ96FX8 193 aa15.68■□□□□ 0.1
CTDNEP1-207ENST00000572043 WFDC6Q9BQY6 131 aa15.68■□□□□ 0.1
CTDNEP1-207ENST00000572043 ESRP2Q9H6T0 727 aaKnown RBP15.68■□□□□ 0.1
CTDNEP1-207ENST00000572043 NGBQ9NPG2 151 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms