RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 SEMA6AQ9H2E6 1030 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 UBQLN3Q9H347 655 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 LIME1Q9H400 295 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 ANKRD19PQ9H560 264 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 ZFP64Q9NPA5 681 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 MED17Q9NVC6 651 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 C15orf41Q9Y2V0 281 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 HEATR5AQ86XA9 2040 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 TRBV4-1A0A0J9YWV2 114 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 CASQ2O14958 399 aaPredicted RBP12.37□□□□□ -0.43
RPAIN-209ENST00000571558 CBR3O75828 277 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 GLSO94925 669 aaPredicted RBP12.37□□□□□ -0.43
RPAIN-209ENST00000571558 GADD45GO95257 159 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 RFPL3SP0C7P2 107 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 UQCRBP14927 111 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 PRKCAP17252 672 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 ACVR2AP27037 513 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 KIR2DL3P43628 341 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 SESN3P58005 492 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 COPZ1P61923 177 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 SPIBQ01892 262 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 ST3GAL3Q11203 375 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 PPP1R8Q12972 351 aaKnown RBP12.37□□□□□ -0.43
RPAIN-209ENST00000571558 HYAL4Q2M3T9 481 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 TMEM44Q2T9K0 475 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 PLPPR5Q32ZL2 321 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 ULK3Q6PHR2 472 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 B3GNT6Q6ZMB0 384 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 WDR88Q6ZMY6 472 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 ATG4DQ86TL0 474 aaPredicted RBP12.37□□□□□ -0.43
RPAIN-209ENST00000571558 LSRQ86X29 649 aaPredicted RBP12.37□□□□□ -0.43
RPAIN-209ENST00000571558 EPHX4Q8IUS5 362 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 SPATA3Q8NHX4 192 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 SLC7A13Q8TCU3 470 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 ST8SIA1Q92185 356 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 SLC38A4Q969I6 547 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 NPAS1Q99742 590 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 TTYH2Q9BSA4 534 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 BDH2Q9BUT1 245 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 ZNF426Q9BUY5 554 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 FNDC11Q9BVV2 318 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 REEP1Q9H902 201 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 TMEM27Q9HBJ8 222 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 TAS2R10Q9NYW0 307 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 SLC7A7Q9UM01 511 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 U3KQV3 271 aa12.37□□□□□ -0.43
RPAIN-209ENST00000571558 EML6Q6ZMW3 1958 aa12.36□□□□□ -0.43
RPAIN-209ENST00000571558 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.36□□□□□ -0.43
RPAIN-209ENST00000571558 C7orf72A4D263 438 aa12.36□□□□□ -0.43
RPAIN-209ENST00000571558 TNFRSF11BO00300 401 aa12.36□□□□□ -0.43
RPAIN-209ENST00000571558 GNGT2O14610 69 aa12.36□□□□□ -0.43
RPAIN-209ENST00000571558 CHP2O43745 196 aa12.36□□□□□ -0.43
RPAIN-209ENST00000571558 ZIC3O60481 467 aa12.36□□□□□ -0.43
RPAIN-209ENST00000571558 NUDT14O95848 222 aa12.36□□□□□ -0.43
RPAIN-209ENST00000571558 MASP1P48740 699 aa12.36□□□□□ -0.43
RPAIN-209ENST00000571558 DSCR4P56555 118 aaPredicted RBP12.36□□□□□ -0.43
RPAIN-209ENST00000571558 SMIM11AP58511 58 aa12.36□□□□□ -0.43
RPAIN-209ENST00000571558 GK3PQ14409 553 aa12.36□□□□□ -0.43
RPAIN-209ENST00000571558 TRAM2Q15035 370 aa12.36□□□□□ -0.43
RPAIN-209ENST00000571558 SEC23BQ15437 767 aa12.36□□□□□ -0.43
RPAIN-209ENST00000571558 EXOC3L2Q2M3D2 409 aa12.36□□□□□ -0.43
RPAIN-209ENST00000571558 SHQ1Q6PI26 577 aaKnown RBP12.36□□□□□ -0.43
RPAIN-209ENST00000571558 NKAIN4Q8IVV8 208 aa12.36□□□□□ -0.43
RPAIN-209ENST00000571558 CADM2Q8N3J6 435 aa12.36□□□□□ -0.43
RPAIN-209ENST00000571558 RPRMLQ8N4K4 120 aa12.36□□□□□ -0.43
RPAIN-209ENST00000571558 OR4K17Q8NGC6 315 aa12.36□□□□□ -0.43
RPAIN-209ENST00000571558 POC1BQ8TC44 478 aa12.36□□□□□ -0.43
RPAIN-209ENST00000571558 DNAJA4Q8WW22 397 aaPredicted RBP12.36□□□□□ -0.43
RPAIN-209ENST00000571558 NRG4Q8WWG1 115 aa12.36□□□□□ -0.43
RPAIN-209ENST00000571558 JSRP1Q96MG2 331 aaPredicted RBP12.36□□□□□ -0.43
RPAIN-209ENST00000571558 PTGES2Q9H7Z7 377 aa12.36□□□□□ -0.43
RPAIN-209ENST00000571558 C12orf10Q9HB07 376 aa12.36□□□□□ -0.43
RPAIN-209ENST00000571558 B4GALT7Q9UBV7 327 aa12.36□□□□□ -0.43
RPAIN-209ENST00000571558 OAZ3Q9UMX2 235 aa12.36□□□□□ -0.43
RPAIN-209ENST00000571558 BOKQ9UMX3 212 aaPredicted RBP12.36□□□□□ -0.43
RPAIN-209ENST00000571558 PLEKHA6Q9Y2H5 1048 aa12.36□□□□□ -0.43
RPAIN-209ENST00000571558 SAMHD1Q9Y3Z3 626 aaKnown RBP12.36□□□□□ -0.43
RPAIN-209ENST00000571558 PHF3Q92576 2039 aaKnown RBP12.35□□□□□ -0.43
RPAIN-209ENST00000571558 HRNRQ86YZ3 2850 aaPredicted RBP12.35□□□□□ -0.43
RPAIN-209ENST00000571558 A0A087WZY1 265 aa12.35□□□□□ -0.43
RPAIN-209ENST00000571558 ACOT7O00154 380 aa12.35□□□□□ -0.43
RPAIN-209ENST00000571558 RAF1P04049 648 aa12.35□□□□□ -0.43
RPAIN-209ENST00000571558 INHBBP09529 407 aa12.35□□□□□ -0.43
RPAIN-209ENST00000571558 FPR1P21462 350 aa12.35□□□□□ -0.43
RPAIN-209ENST00000571558 TACR3P29371 465 aa12.35□□□□□ -0.43
RPAIN-209ENST00000571558 LSM11P83369 360 aaKnown RBP eCLIP12.35□□□□□ -0.43
RPAIN-209ENST00000571558 ALG10BQ5I7T1 473 aa12.35□□□□□ -0.43
RPAIN-209ENST00000571558 OGFRL1Q5TC84 451 aaPredicted RBP12.35□□□□□ -0.43
RPAIN-209ENST00000571558 ZNF770Q6IQ21 691 aaPredicted RBP12.35□□□□□ -0.43
RPAIN-209ENST00000571558 PODNL1Q6PEZ8 512 aa12.35□□□□□ -0.43
RPAIN-209ENST00000571558 PAMR1Q6UXH9 720 aa12.35□□□□□ -0.43
RPAIN-209ENST00000571558 GRINAQ7Z429 371 aa12.35□□□□□ -0.43
RPAIN-209ENST00000571558 CDC20BQ86Y33 519 aa12.35□□□□□ -0.43
RPAIN-209ENST00000571558 HS3ST5Q8IZT8 346 aa12.35□□□□□ -0.43
RPAIN-209ENST00000571558 OR52J3Q8NH60 311 aa12.35□□□□□ -0.43
RPAIN-209ENST00000571558 OR5K1Q8NHB7 308 aa12.35□□□□□ -0.43
RPAIN-209ENST00000571558 ZNF563Q8TA94 476 aa12.35□□□□□ -0.43
RPAIN-209ENST00000571558 FAM222BQ8WU58 562 aa12.35□□□□□ -0.43
RPAIN-209ENST00000571558 NRBF2Q96F24 287 aa12.35□□□□□ -0.43
RPAIN-209ENST00000571558 LRRC46Q96FV0 321 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms