RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 NPIPA5E9PKD4 350 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 K7EM74 188 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 ETV2O00321 342 aaPredicted RBP5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 OR2T1O43869 369 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 HCN1O60741 890 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 OR6A2O95222 327 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 NTN1O95631 604 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 ACTL6AO96019 429 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 HPRP00739 348 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 MT-ATP6P00846 226 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 HIST1H2ABP04908 130 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 CELA3AP09093 270 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 POU2F1P14859 743 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 CHMP24386 653 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 FPR3P25089 353 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 RPS5P46782 204 aaKnown RBP5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 HSPA13P48723 471 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 CLK1P49759 484 aaKnown RBP5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 DLX5P56178 289 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 RPS3AP61247 264 aaKnown RBP5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 DAG1Q14118 895 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 MICAQ29983 383 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 RFX4Q33E94 735 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 IQCCQ4KMZ1 466 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 FAM69AQ5T7M9 428 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 WDR88Q6ZMY6 472 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 ESPNLQ6ZVH7 1005 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 HIST3H2AQ7L7L0 130 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 MAMDC2Q7Z304 686 aaPredicted RBP5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 TSEN54Q7Z6J9 526 aaKnown RBP5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 TSPYL5Q86VY4 417 aaPredicted RBP5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 P3H2Q8IVL5 708 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 GHDCQ8N2G8 530 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 CBR4Q8N4T8 237 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 PACRGLQ8N7B6 248 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 OR52L1Q8NGH7 329 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 OR4C15Q8NGM1 316 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 PFN4Q8NHR9 129 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 NEIL3Q8TAT5 605 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 TEX47Q8TBZ9 253 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 MAGEE2Q8TD90 523 aaPredicted RBP5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 GNPDA2Q8TDQ7 276 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 STK35Q8TDR2 534 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 HIST1H2ACQ93077 130 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 RELTQ969Z4 430 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 SARAFQ96BY9 339 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 SLC25A36Q96CQ1 311 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 BPIFA2Q96DR5 249 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 FAM46AQ96IP4 442 aaKnown RBP5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 KLHDC3Q9BQ90 382 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 TEX12Q9BXU0 123 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 PRRG3Q9BZD7 231 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 OR11A1Q9GZK7 315 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 ADAM19Q9H013 955 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 GABARAPL1Q9H0R8 117 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 DEFB127Q9H1M4 99 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 ZDHHC11Q9H8X9 412 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 ACKR4Q9NPB9 350 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 TIGARQ9NQ88 270 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 NANSQ9NR45 359 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 PAPOLBQ9NRJ5 636 aaKnown RBP5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 ALKBH4Q9NXW9 302 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 NKX1-2Q9UD57 310 aaPredicted RBP5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 NPIPA1Q9UND3 350 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 POFUT2Q9Y2G5 429 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 SLC6A5Q9Y345 797 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 HDGFL3Q9Y3E1 203 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 AP4B1Q9Y6B7 739 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 FREM2Q5SZK8 3169 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 AKAP13Q12802 2813 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 IGKV1D-42A0A075B6H8 117 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 UNC119BA6NIH7 251 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 B4DXG7 233 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 H3BN98 237 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 PDLIM1O00151 329 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 SULT2B1O00204 365 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 TNFSF11O14788 317 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 CASQ2O14958 399 aaPredicted RBP5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 OR7A10O76100 309 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 LYPD3O95274 346 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 SYNGR4O95473 234 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 CH25HO95992 272 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 IGF2P01344 180 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 THY1P04216 161 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 FCGR2AP12318 317 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 EDN3P14138 238 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 ABOP16442 354 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 VHLP40337 213 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 LIMS1P48059 325 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 PTDSS1P48651 473 aaKnown RBP5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 SLC9A3P48764 834 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 ALDH3A2P51648 485 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 HMGA2P52926 109 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 TPD52P55327 224 aaPredicted RBP5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 OR2B6P58173 313 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 RAC1P63000 192 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 SLC35A1P78382 337 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 SRYQ05066 204 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 PRKCDQ05655 676 aa5.93□□□□□ -1.46
CTDNEP1-204ENST00000570484 RBPJQ06330 500 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms