RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 OR9I1Q8NGQ6 314 aa12.17□□□□□ -0.46
GTF3C1-211ENST00000569653 CKAP2Q8WWK9 683 aa12.17□□□□□ -0.46
GTF3C1-211ENST00000569653 VPS33AQ96AX1 596 aa12.17□□□□□ -0.46
GTF3C1-211ENST00000569653 APH1AQ96BI3 265 aa12.17□□□□□ -0.46
GTF3C1-211ENST00000569653 AURKBQ96GD4 344 aaPredicted RBP12.17□□□□□ -0.46
GTF3C1-211ENST00000569653 MAGEB18Q96M61 343 aa12.17□□□□□ -0.46
GTF3C1-211ENST00000569653 MED4Q9NPJ6 270 aa12.17□□□□□ -0.46
GTF3C1-211ENST00000569653 CISD1Q9NZ45 108 aaKnown RBP12.17□□□□□ -0.46
GTF3C1-211ENST00000569653 ZIM2Q9NZV7 527 aa12.17□□□□□ -0.46
GTF3C1-211ENST00000569653 TMEM181Q9P2C4 612 aa12.17□□□□□ -0.46
GTF3C1-211ENST00000569653 NOSIPQ9Y314 301 aaKnown RBP12.17□□□□□ -0.46
GTF3C1-211ENST00000569653 FLVCR1Q9Y5Y0 555 aa12.17□□□□□ -0.46
GTF3C1-211ENST00000569653 STAB1Q9NY15 2570 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 A0A096LNT2 108 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 A0A1W2PP18 115 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 FAAHO00519 579 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 DNPH1O43598 174 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 ETFAP13804 333 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 HOXB9P17482 250 aaPredicted RBP12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 ZNF83P51522 516 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 P2RY4P51582 365 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 CDH11P55287 796 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 STX1BP61266 288 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 IRX1P78414 480 aaPredicted RBP12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 HPCAP84074 193 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 SLC17A1Q14916 467 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 GABRA6Q16445 453 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 RPS26P11Q5JNZ5 115 aaPredicted RBP12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 C9orf135Q5VTT2 229 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 C11orf71Q6IPW1 123 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 UBE2J2Q8N2K1 259 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 MIER2Q8N344 545 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 CLIP4Q8N3C7 705 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 PIGXQ8TBF5 258 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 WDR60Q8WVS4 1066 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 C1QTNF6Q9BXI9 259 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 AMBRA1Q9C0C7 1298 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 ADAM19Q9H013 955 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 NGBQ9NPG2 151 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 TCF7L2Q9NQB0 619 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 SDR39U1Q9NRG7 319 aaPredicted RBP12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 SLC7A10Q9NS82 523 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 EMC3Q9P0I2 261 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 B3GALT5Q9Y2C3 310 aa12.16□□□□□ -0.46
GTF3C1-211ENST00000569653 CDHR4A6H8M9 788 aa12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 ZNF208O43345 1280 aa12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 NUDT7P0C024 238 aa12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 SLC1A3P43003 542 aa12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 CLK1P49759 484 aaKnown RBP12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 ANXA11P50995 505 aaKnown RBP12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 POLR2HP52434 150 aaKnown RBP12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 TXNL4AP83876 142 aaKnown RBP12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 LGALS3BPQ08380 585 aa12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 BNIP2Q12982 314 aa12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 TSPO2Q5TGU0 170 aa12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 MSANTD1Q6ZTZ1 278 aa12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 COMTD1Q86VU5 262 aa12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 CMIPQ8IY22 773 aa12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 C10orf111Q8N326 155 aa12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 HTRA1Q92743 480 aa12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 MUS81Q96NY9 551 aa12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 ZNF385AQ96PM9 386 aaKnown RBP12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 USB1Q9BQ65 265 aaKnown RBP12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 CCDC28BQ9BUN5 200 aa12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 REG4Q9BYZ8 158 aa12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 RMND5AQ9H871 391 aa12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 MTHFD2LQ9H903 347 aaPredicted RBP12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 TRAPPC4Q9Y296 219 aa12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 SPIN1Q9Y657 262 aaPredicted RBP12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 FBN3Q75N90 2809 aa12.15□□□□□ -0.46
GTF3C1-211ENST00000569653 MALRD1Q5VYJ5 2156 aa12.14□□□□□ -0.47
GTF3C1-211ENST00000569653 CFAP73A6NFT4 308 aa12.14□□□□□ -0.47
GTF3C1-211ENST00000569653 LIPT2A6NK58 231 aa12.14□□□□□ -0.47
GTF3C1-211ENST00000569653 RFXANKO14593 260 aa12.14□□□□□ -0.47
GTF3C1-211ENST00000569653 AKR7A3O95154 331 aa12.14□□□□□ -0.47
GTF3C1-211ENST00000569653 DBIP07108 87 aaKnown RBP12.14□□□□□ -0.47
GTF3C1-211ENST00000569653 TFPTP0C1Z6 253 aa12.14□□□□□ -0.47
GTF3C1-211ENST00000569653 NR2F1P10589 423 aa12.14□□□□□ -0.47
GTF3C1-211ENST00000569653 CD40P25942 277 aa12.14□□□□□ -0.47
GTF3C1-211ENST00000569653 IDH3AP50213 366 aa12.14□□□□□ -0.47
GTF3C1-211ENST00000569653 POLR2JP52435 117 aaKnown RBP12.14□□□□□ -0.47
GTF3C1-211ENST00000569653 AQP5P55064 265 aa12.14□□□□□ -0.47
GTF3C1-211ENST00000569653 HSP90B2PQ58FF3 399 aa12.14□□□□□ -0.47
GTF3C1-211ENST00000569653 CASP12Q6UXS9 341 aa12.14□□□□□ -0.47
GTF3C1-211ENST00000569653 P2RY8Q86VZ1 359 aa12.14□□□□□ -0.47
GTF3C1-211ENST00000569653 TMEM99Q8N816 258 aa12.14□□□□□ -0.47
GTF3C1-211ENST00000569653 SLC38A5Q8WUX1 472 aa12.14□□□□□ -0.47
GTF3C1-211ENST00000569653 GTPBP3Q969Y2 492 aaKnown RBP12.14□□□□□ -0.47
GTF3C1-211ENST00000569653 MUCL1Q96DR8 90 aa12.14□□□□□ -0.47
GTF3C1-211ENST00000569653 ASB6Q9NWX5 421 aa12.14□□□□□ -0.47
GTF3C1-211ENST00000569653 TAS2R16Q9NYV7 291 aa12.14□□□□□ -0.47
GTF3C1-211ENST00000569653 IGHV4-30-2A0A087WSY4 118 aa12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 CIB4A0PJX0 185 aa12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 FAM234BA2RU67 622 aa12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 GPR171O14626 319 aa12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 FRS3O43559 492 aa12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 MRPL33O75394 65 aaKnown RBP12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 BCHEP06276 602 aa12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 IL7RP16871 459 aa12.13□□□□□ -0.47
GTF3C1-211ENST00000569653 HTR3AP46098 478 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms