RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 GXYLT1Q4G148 440 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 FAAH2Q6GMR7 532 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 ZNF563Q8TA94 476 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 SMPDL3BQ92485 455 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 GPX7Q96SL4 187 aaPredicted RBP16.55■□□□□ 0.24
SMPD3-211ENST00000568373 KLHDC3Q9BQ90 382 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 KATNB1Q9BVA0 655 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 HDHD5Q9BXW7 423 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 LOC110117498-PIK3R3F6TDL0 507 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 HCRTR2O43614 444 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 TIAF1O95411 115 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 ACTC1P68032 377 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 ACTA1P68133 377 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 PSPHP78330 225 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 DNASE1L3Q13609 305 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 ISXQ2M1V0 245 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 NKAIN1Q4KMZ8 207 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 STEAP3Q658P3 488 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 DCLRE1CQ96SD1 692 aaKnown RBP16.55■□□□□ 0.24
SMPD3-211ENST00000568373 C12orf10Q9HB07 376 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 TRIM36Q9NQ86 728 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 PLEKHB1Q9UF11 243 aaPredicted RBP16.55■□□□□ 0.24
SMPD3-211ENST00000568373 WDR87Q6ZQQ6 2873 aa16.55■□□□□ 0.24
SMPD3-211ENST00000568373 FUOMA2VDF0 154 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 AGRPO00253 132 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 GABRPO00591 440 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 YKT6O15498 198 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 NDUFB5O43674 189 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 IDH3BO43837 385 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 MT-ND5P03915 603 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 GALP22466 123 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 TACR3P29371 465 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 PNLIPRP2P54317 469 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 EGR4Q05215 589 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 MARCH3Q86UD3 253 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 GPALPP1Q8IXQ4 340 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 FAM83FQ8NEG4 500 aaPredicted RBP16.54■□□□□ 0.24
SMPD3-211ENST00000568373 NAT6Q93015 286 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 WDFY2Q96P53 400 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 TBL1XR1Q9BZK7 514 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 ADAM19Q9H013 955 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 GAREM1Q9H706 876 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 SYNDIG1Q9H7V2 258 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 MMP25Q9NPA2 562 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 POLE4Q9NR33 117 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 NANSQ9NR45 359 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 RARRES3Q9UL19 164 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 POLHQ9Y253 713 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 HIF3AQ9Y2N7 669 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 LAMTOR5O43504 91 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 RNF13O43567 381 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 EIF4E2O60573 245 aaKnown RBP16.54■□□□□ 0.24
SMPD3-211ENST00000568373 SCRG1O75711 98 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 SNX4O95219 450 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 CFIP05156 583 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 GTF2E2P29084 291 aaKnown RBP16.54■□□□□ 0.24
SMPD3-211ENST00000568373 ZXDAP98168 799 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 ZNF85Q03923 595 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 PWWP2BQ6NUJ5 590 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 SLC22A16Q86VW1 577 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 MARCH9Q86YJ5 346 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 LAX1Q8IWV1 398 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 EID2Q8N6I1 236 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 C10orf53Q8N6V4 93 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 NPEPL1Q8NDH3 523 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 MOSPD2Q8NHP6 518 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 SNRNP27Q8WVK2 155 aaKnown RBP16.54■□□□□ 0.24
SMPD3-211ENST00000568373 ASB15Q8WXK1 588 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 CCDC74BQ96LY2 380 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 MOGAT1Q96PD6 335 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 CMAHPQ9Y471 501 aa16.54■□□□□ 0.24
SMPD3-211ENST00000568373 SIRT4Q9Y6E7 314 aaPredicted RBP16.54■□□□□ 0.24
SMPD3-211ENST00000568373 IGHV3-20A0A0C4DH32 117 aa16.53■□□□□ 0.24
SMPD3-211ENST00000568373 A0A1W2PQL4 384 aaPredicted RBP16.53■□□□□ 0.24
SMPD3-211ENST00000568373 SLC35F4A4IF30 521 aa16.53■□□□□ 0.24
SMPD3-211ENST00000568373 IDSB3KWA1 339 aa16.53■□□□□ 0.24
SMPD3-211ENST00000568373 BCAP31P51572 246 aa16.53■□□□□ 0.24
SMPD3-211ENST00000568373 ERVK-25P63136 954 aa16.53■□□□□ 0.24
SMPD3-211ENST00000568373 GGTLC2Q14390 218 aa16.53■□□□□ 0.24
SMPD3-211ENST00000568373 OR5W2Q8NH69 310 aa16.53■□□□□ 0.24
SMPD3-211ENST00000568373 SMAP2Q8WU79 429 aaPredicted RBP16.53■□□□□ 0.24
SMPD3-211ENST00000568373 ZMYND19Q96E35 227 aaPredicted RBP16.53■□□□□ 0.24
SMPD3-211ENST00000568373 NMNAT3Q96T66 252 aa16.53■□□□□ 0.24
SMPD3-211ENST00000568373 DDOQ99489 341 aa16.53■□□□□ 0.24
SMPD3-211ENST00000568373 KLHL1Q9NR64 748 aa16.53■□□□□ 0.24
SMPD3-211ENST00000568373 ZMIZ1Q9ULJ6 1067 aa16.53■□□□□ 0.24
SMPD3-211ENST00000568373 ADAMTS9Q9P2N4 1935 aa16.52■□□□□ 0.24
SMPD3-211ENST00000568373 BLOC1S5-TXNDC5H3BN57 136 aa16.52■□□□□ 0.24
SMPD3-211ENST00000568373 ASAH2BP0C7U1 165 aa16.52■□□□□ 0.24
SMPD3-211ENST00000568373 AQP2P41181 271 aa16.52■□□□□ 0.24
SMPD3-211ENST00000568373 RNF4P78317 190 aa16.52■□□□□ 0.24
SMPD3-211ENST00000568373 LGALS3BPQ08380 585 aa16.52■□□□□ 0.24
SMPD3-211ENST00000568373 INSL4Q14641 139 aa16.52■□□□□ 0.24
SMPD3-211ENST00000568373 LCN1P1Q5VSP4 162 aa16.52■□□□□ 0.24
SMPD3-211ENST00000568373 NUP54Q7Z3B4 507 aa16.52■□□□□ 0.24
SMPD3-211ENST00000568373 ANKRD37Q7Z713 158 aa16.52■□□□□ 0.24
SMPD3-211ENST00000568373 ZNF554Q86TJ5 538 aa16.52■□□□□ 0.24
SMPD3-211ENST00000568373 POMGNT2Q8NAT1 580 aa16.52■□□□□ 0.24
SMPD3-211ENST00000568373 NEIL3Q8TAT5 605 aa16.52■□□□□ 0.24
SMPD3-211ENST00000568373 RASD2Q96D21 266 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms