RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	MRPL33	O75394	65 aa	Known RBP	6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	LYZL6	O75951	148 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	PLAU	P00749	431 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	THBS1	P07996	1170 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	BMP2	P12643	396 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	HOXB9	P17482	250 aa	Predicted RBP	6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	NCF2	P19878	526 aa	Predicted RBP	6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	PPIB	P23284	216 aa	Known RBP	6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	LSP1	P33241	339 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	ATP4B	P51164	291 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	SLC16A1	P53985	500 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	H3F3A	P84243	136 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	FOXD4	Q12950	439 aa	Predicted RBP	6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	FADD	Q13158	208 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	CAPRIN1	Q14444	709 aa	Known RBP	6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	TAB1	Q15750	504 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	AGK	Q53H12	422 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	ZNF311	Q5JNZ3	666 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	LRIF1	Q5T3J3	769 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	RNF220	Q5VTB9	566 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	FBXW9	Q5XUX1	488 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	ABLIM2	Q6H8Q1	611 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	WBP2NL	Q6ICG8	309 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	REEP3	Q6NUK4	255 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	ZNF836	Q6ZNA1	936 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	ZNF704	Q6ZNC4	412 aa	Predicted RBP	6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	P2RY8	Q86VZ1	359 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	P3H2	Q8IVL5	708 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	UBE2J2	Q8N2K1	259 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	CADM2	Q8N3J6	435 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	ZNF433	Q8N7K0	673 aa	Predicted RBP	6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	ANKK1	Q8NFD2	765 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	APH1A	Q96BI3	265 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	MUCL1	Q96DR8	90 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	MAGEB18	Q96M61	343 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	FAM210A	Q96ND0	272 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	CCL19	Q99731	98 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	TMEM204	Q9BSN7	226 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	RABEP2	Q9H5N1	569 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	CCDC134	Q9H6E4	229 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	ESRP2	Q9H6T0	727 aa	Known RBP	6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	BCL2L10	Q9HD36	194 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	SLC52A3	Q9NQ40	469 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	PARPBP	Q9NWS1	579 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	SLC25A37	Q9NYZ2	338 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	CCDC167	Q9P0B6	97 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	ZNF443	Q9Y2A4	671 aa	Predicted RBP	6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	AKAP9	Q99996	3911 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	CHD3	Q12873	2000 aa	Known RBP	6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635		A0A1W2PP18	115 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	ZC3H12D	A2A288	527 aa	Known RBP	6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	LIPT2	A6NK58	231 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	CCT8L1P	A6NM43	557 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635		A8MVM7	634 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	EVPLL	A8MZ36	301 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	HS3ST1	O14792	307 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	RAMP1	O60894	148 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	TMCC2	O75069	709 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	PGM3	O95394	542 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	IGHV3-9	P01782	118 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	GPI	P06744	558 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	CD3E	P07766	207 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	IMPDH2	P12268	514 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	PRG2	P13727	222 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	ETS2	P15036	469 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	GPX2	P18283	190 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	GGT1	P19440	569 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	IGHV1-2	P23083	117 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	EDNRA	P25101	427 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	ADSL	P30566	484 aa	Predicted RBP	6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	NTF4	P34130	210 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	IDUA	P35475	653 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	BNIP2	Q12982	314 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	CEACAM7	Q14002	265 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	SQLE	Q14534	574 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	SLC17A1	Q14916	467 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	PPA1	Q15181	289 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	C11orf91	Q3C1V1	193 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	PAGE3	Q5JUK9	113 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	TIMM23B	Q5SRD1	257 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	NCMAP	Q5T1S8	102 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	GCNT6	Q5T4J0	391 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	TMEM225	Q6GV28	225 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	ADAM5	Q6NVV9	412 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	PAQR6	Q6TCH4	344 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	PRSS57	Q6UWY2	283 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	SSX8	Q7RTT4	187 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	KRT73	Q86Y46	540 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	MSRB3	Q8IXL7	192 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	LRRC75A-AS1	Q8N1F1	130 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	ZNF611	Q8N823	705 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	WFDC11	Q8NEX6	87 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	NFKBID	Q8NI38	313 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	BBS10	Q8TAM1	723 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	STON2	Q8WXE9	905 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	AKAP1	Q92667	903 aa	Known RBP eCLIP	6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	MAL2	Q969L2	176 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	SLC35B4	Q969S0	331 aa		6.11	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms