RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 ASCL1P50553 236 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 P2RY4P51582 365 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 MNAT1P51948 309 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 SLC16A1P53985 500 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 CDH12P55289 794 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 CSNK2A1P68400 391 aaPredicted RBP11.06□□□□□ -0.64
RNF40-211ENST00000567365 CEACAM7Q14002 265 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 PDK3Q15120 406 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 RNPS1Q15287 305 aaKnown RBP11.06□□□□□ -0.64
RNF40-211ENST00000567365 SPATS1Q496A3 300 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 ALG10BQ5I7T1 473 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 ENTPD8Q5MY95 495 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 WDR88Q6ZMY6 472 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 TRPM8Q7Z2W7 1104 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 TSEN54Q7Z6J9 526 aaKnown RBP11.06□□□□□ -0.64
RNF40-211ENST00000567365 CARM1Q86X55 608 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 SLC43A2Q8N370 569 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 RNF148Q8N7C7 305 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 FAM156AQ8NDB6 213 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 DDIT4LQ96D03 193 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 SLC47A1Q96FL8 570 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 CDRT15Q96T59 188 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 MCHR1Q99705 422 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 KCTD14Q9BQ13 255 aaPredicted RBP11.06□□□□□ -0.64
RNF40-211ENST00000567365 SPOCK3Q9BQ16 436 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 PSD2Q9BQI7 771 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 PRSS27Q9BQR3 290 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 PIGMQ9H3S5 423 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 CHST11Q9NPF2 352 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 GLRX2Q9NS18 164 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 SLC13A4Q9UKG4 626 aa11.06□□□□□ -0.64
RNF40-211ENST00000567365 HRNRQ86YZ3 2850 aaPredicted RBP11.06□□□□□ -0.64
RNF40-211ENST00000567365 CSMD2Q7Z408 3487 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 B2RBV5 119 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 CHP2O43745 196 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 PRKD3O94806 890 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 IFNA14P01570 189 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 TFPIP10646 304 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 FPR1P21462 350 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 LRRC23Q53EV4 343 aaPredicted RBP11.05□□□□□ -0.64
RNF40-211ENST00000567365 SAMD4BQ5PRF9 694 aaKnown RBP11.05□□□□□ -0.64
RNF40-211ENST00000567365 C1orf140Q5VVS0 124 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 SP5Q6BEB4 398 aaPredicted RBP11.05□□□□□ -0.64
RNF40-211ENST00000567365 ZNF474Q6S9Z5 364 aaPredicted RBP11.05□□□□□ -0.64
RNF40-211ENST00000567365 PAQR6Q6TCH4 344 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 RINLQ6ZS11 566 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 VTCN1Q7Z7D3 282 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 RANBP3LQ86VV4 465 aaPredicted RBP11.05□□□□□ -0.64
RNF40-211ENST00000567365 DMRTC2Q8IXT2 367 aaPredicted RBP11.05□□□□□ -0.64
RNF40-211ENST00000567365 DEFB107AQ8IZN7 70 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 OR6K3Q8NGY3 331 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 VANGL1Q8TAA9 524 aaPredicted RBP11.05□□□□□ -0.64
RNF40-211ENST00000567365 SLC26A7Q8TE54 656 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 ADAMTS16Q8TE57 1224 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 RNASE6Q93091 150 aaKnown RBP11.05□□□□□ -0.64
RNF40-211ENST00000567365 TMEM43Q9BTV4 400 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 PRRG4Q9BZD6 226 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 C1orf21Q9H246 121 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 GORASP2Q9H8Y8 452 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 TMEM27Q9HBJ8 222 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 PLSCR4Q9NRQ2 329 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 NDE1Q9NXR1 346 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 TAS2R1Q9NYW7 299 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 KLHL13Q9P2N7 655 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 EGFL7Q9UHF1 273 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 CLEC4AQ9UMR7 237 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 SLC9A8Q9Y2E8 581 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 SH3GLB1Q9Y371 365 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 CSMD1Q96PZ7 3565 aa11.05□□□□□ -0.64
RNF40-211ENST00000567365 LRBAP50851 2863 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 TRAPPC13A5PLN9 417 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 ZNF724A8MTY0 619 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 EIF1BO60739 113 aaKnown RBP11.04□□□□□ -0.64
RNF40-211ENST00000567365 UBOX5O94941 541 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 PRSS23O95084 383 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 NCK1P16333 377 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 FUT4P22083 530 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 NTF4P34130 210 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 IDUAP35475 653 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 OR1E2P47887 323 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 OR2B6P58173 313 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 NCALDP61601 193 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 SLC35A1P78382 337 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 LTBQ06643 244 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 IQCCQ4KMZ1 466 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 GTF2IRD2BQ6EKJ0 949 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 GLYATQ6IB77 296 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 C5orf46Q6UWT4 87 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 C16orf89Q6UX73 402 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 NUFIP2Q7Z417 695 aaKnown RBP11.04□□□□□ -0.64
RNF40-211ENST00000567365 GTF2IRD2Q86UP8 949 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 CNEP1R1Q8N9A8 125 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 OR6S1Q8NH40 331 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 MFSD8Q8NHS3 518 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 PROX1Q92786 737 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 TAAR8Q969N4 342 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 KTI12Q96EK9 354 aaPredicted RBP11.04□□□□□ -0.64
RNF40-211ENST00000567365 DNAJA3Q96EY1 480 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 POLR2J2Q9GZM3 115 aaKnown RBP11.04□□□□□ -0.64
RNF40-211ENST00000567365 POLR2J3Q9H1A7 115 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms