RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 GGNQ86UU5 652 aa8.46□□□□□ -1.06
CAPN3-216ENST00000567071 CLECL1Q8IZS7 167 aa8.46□□□□□ -1.06
CAPN3-216ENST00000567071 OR8J2Q8NGG1 315 aa8.46□□□□□ -1.06
CAPN3-216ENST00000567071 NEU4Q8WWR8 484 aaPredicted RBP8.46□□□□□ -1.06
CAPN3-216ENST00000567071 WFDC12Q8WWY7 111 aa8.46□□□□□ -1.06
CAPN3-216ENST00000567071 MTERF3Q96E29 417 aa8.46□□□□□ -1.06
CAPN3-216ENST00000567071 DUX5Q96PT3 197 aa8.46□□□□□ -1.06
CAPN3-216ENST00000567071 BBS4Q96RK4 519 aa8.46□□□□□ -1.06
CAPN3-216ENST00000567071 GIMAP4Q9NUV9 329 aa8.46□□□□□ -1.06
CAPN3-216ENST00000567071 ATAD3AQ9NVI7 634 aa8.46□□□□□ -1.06
CAPN3-216ENST00000567071 TMEM45AQ9NWC5 275 aa8.46□□□□□ -1.06
CAPN3-216ENST00000567071 FAM120CQ9NX05 1096 aaKnown RBP8.46□□□□□ -1.06
CAPN3-216ENST00000567071 TAS2R16Q9NYV7 291 aa8.46□□□□□ -1.06
CAPN3-216ENST00000567071 BCAP29Q9UHQ4 241 aa8.46□□□□□ -1.06
CAPN3-216ENST00000567071 LEF1Q9UJU2 399 aaPredicted RBP8.46□□□□□ -1.06
CAPN3-216ENST00000567071 MMP24Q9Y5R2 645 aa8.46□□□□□ -1.06
CAPN3-216ENST00000567071 A0A0G2JMP0 313 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 A0A0X1KG70 313 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 SLC22A31A6NKX4 558 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 BBIP1A8MTZ0 92 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 B2RBV5 119 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 TBX19O60806 448 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 CPSF4O95639 269 aaKnown RBP8.45□□□□□ -1.06
CAPN3-216ENST00000567071 IL33O95760 270 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 C6orf47O95873 294 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 PRB2P02812 416 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-216ENST00000567071 GSNP06396 782 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 RNASE1P07998 156 aaKnown RBP8.45□□□□□ -1.06
CAPN3-216ENST00000567071 PCSK2P16519 638 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 ME2P23368 584 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 NTSP30990 170 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 FEN1P39748 380 aaKnown RBP8.45□□□□□ -1.06
CAPN3-216ENST00000567071 CDKN2CP42773 168 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 PPOXP50336 477 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 IDH3GP51553 393 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-216ENST00000567071 NCALDP61601 193 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 HSPB3Q12988 150 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 BAMBIQ13145 260 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 STX5Q13190 355 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 NFYCQ13952 458 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 ANXA8L1Q5VT79 327 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 ZNF551Q7Z340 670 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-216ENST00000567071 DHDDSQ86SQ9 333 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 ZNF786Q8N393 782 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 SIGLECL1Q8N7X8 197 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 FADS6Q8N9I5 356 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 OR2M3Q8NG83 312 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 OR4M2Q8NGB6 313 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 OR4A15Q8NGL6 344 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 OR52N5Q8NH56 324 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 FAM110BQ8TC76 370 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 C22orf15Q8WYQ4 148 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 GTF3AQ92664 365 aaKnown RBP8.45□□□□□ -1.06
CAPN3-216ENST00000567071 TMBIM1Q969X1 311 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 COQ8BQ96D53 544 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 CNRIP1Q96F85 164 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-216ENST00000567071 ITCHQ96J02 903 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 GPA33Q99795 319 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 C1QTNF5Q9BXJ0 243 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 ITPAQ9BY32 194 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 RMND5AQ9H871 391 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 EFCAB1Q9HAE3 211 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 BEX1Q9HBH7 125 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 GP6Q9HCN6 339 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 SLC35C2Q9NQQ7 365 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 KLHL13Q9P2N7 655 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 TESQ9UGI8 421 aaKnown RBP8.45□□□□□ -1.06
CAPN3-216ENST00000567071 CES1P1Q9UKY3 287 aa8.45□□□□□ -1.06
CAPN3-216ENST00000567071 COL7A1Q02388 2944 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 A0A1W2PRB8 838 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 CIB4A0PJX0 185 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 B9A039 149 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 J3QLI3 93 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 SCN2BO60939 215 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 ANP32DO95626 131 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 NT5EP21589 574 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 SOAT1P35610 550 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 NCBP2P52298 156 aaKnown RBP eCLIP8.44□□□□□ -1.06
CAPN3-216ENST00000567071 SLC25A3Q00325 362 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 SRSF4Q08170 494 aaKnown RBP8.44□□□□□ -1.06
CAPN3-216ENST00000567071 ZP4Q12836 540 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 ZNHIT3Q15649 155 aaPredicted RBP8.44□□□□□ -1.06
CAPN3-216ENST00000567071 MST1LQ2TV78 715 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 TRMT5Q32P41 509 aaKnown RBP8.44□□□□□ -1.06
CAPN3-216ENST00000567071 GTDC1Q4AE62 458 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 COQ5Q5HYK3 327 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 SAXO2Q658L1 398 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 RUSC1-AS1Q66K80 236 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 HBMQ6B0K9 141 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 C1orf229Q6ZS94 237 aaPredicted RBP8.44□□□□□ -1.06
CAPN3-216ENST00000567071 MSANTD1Q6ZTZ1 278 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 DOK3Q7L591 496 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 TUSC5Q8IXB3 177 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 CLEC4FQ8N1N0 589 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 PCYOX1LQ8NBM8 494 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 RBM15BQ8NDT2 890 aaKnown RBP8.44□□□□□ -1.06
CAPN3-216ENST00000567071 OR4K14Q8NGD5 310 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 OR9A2Q8NGT5 310 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 OR2V1Q8NHB1 315 aa8.44□□□□□ -1.06
CAPN3-216ENST00000567071 FAM110DQ8TAY7 271 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms