RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 OR5M9Q8NGP3 310 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 RPS4Y2Q8TD47 263 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 SDF2Q99470 211 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 SLC6A15Q9H2J7 730 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 C6orf106Q9H6K1 298 aaPredicted RBP14.44□□□□□ -0.1
COMMD4-215ENST00000566843 EXOSC3Q9NQT5 275 aaKnown RBP14.44□□□□□ -0.1
COMMD4-215ENST00000566843 TM7SF3Q9NS93 570 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 OPN4Q9UHM6 478 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 POM121CA8CG34 1229 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 D6RAR5 112 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 GPRIN2O60269 458 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 SELENOFO60613 162 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 PPP1R3DO95685 299 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 RAB40ALP0C0E4 278 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 HCCSP53701 268 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 MAT1AQ00266 395 aaKnown RBP14.44□□□□□ -0.1
COMMD4-215ENST00000566843 ETFDHQ16134 617 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 AMZ1Q400G9 498 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 LILRA6Q6PI73 481 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 GSG1LQ6UXU4 331 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 FCRLAQ7L513 359 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 CDH26Q8IXH8 852 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 RAB42Q8N4Z0 105 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 DNAAF1Q8NEP3 725 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 TMIEQ8NEW7 156 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 RAB40AQ8WXH6 277 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 MRPS24Q96EL2 167 aaKnown RBP14.44□□□□□ -0.1
COMMD4-215ENST00000566843 C10orf90Q96M02 699 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 SMAD5Q99717 465 aaKnown RBP14.44□□□□□ -0.1
COMMD4-215ENST00000566843 MRI1Q9BV20 369 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 NOX4Q9NPH5 578 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 MED11Q9P086 117 aa14.44□□□□□ -0.1
COMMD4-215ENST00000566843 TRBV2A0A0J9YWF9 115 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 DNASE2O00115 360 aaPredicted RBP14.43□□□□□ -0.1
COMMD4-215ENST00000566843 MAGEB4O15481 346 aaPredicted RBP14.43□□□□□ -0.1
COMMD4-215ENST00000566843 RNGTTO60942 597 aaKnown RBP14.43□□□□□ -0.1
COMMD4-215ENST00000566843 GYPBP06028 91 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 PROS1P07225 676 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 C8AP07357 584 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 CISD3P0C7P0 127 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 VSIG10L2P0DP72 767 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 ADRB3P13945 408 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 RAB3AP20336 220 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 MAPK3P27361 379 aaPredicted RBP14.43□□□□□ -0.1
COMMD4-215ENST00000566843 ZNF77Q15935 545 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 DGLUCYQ7Z3D6 616 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 SLC43A2Q8N370 569 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 POMGNT2Q8NAT1 580 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 S100A16Q96FQ6 103 aaKnown RBP14.43□□□□□ -0.1
COMMD4-215ENST00000566843 OR1F2PQ96R84 312 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 ZNF350Q9GZX5 532 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 SLC6A20Q9NP91 592 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 IL23AQ9NPF7 189 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 TAS2R10Q9NYW0 307 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 GPR160Q9UJ42 338 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 SERTAD3Q9UJW9 196 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 FBXL2Q9UKC9 423 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 MED31Q9Y3C7 131 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 TRAV27A0A087WT01 109 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 ACOT7O00154 380 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 ARPC5O15511 151 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 LDOC1O95751 146 aaPredicted RBP14.43□□□□□ -0.1
COMMD4-215ENST00000566843 HPP00738 406 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 IFNGP01579 166 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 DBIP07108 87 aaKnown RBP14.43□□□□□ -0.1
COMMD4-215ENST00000566843 SLC35G4P0C7Q5 338 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 GKN3PP0CG01 181 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 CALCBP10092 127 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 HOXB3P14651 431 aaPredicted RBP14.43□□□□□ -0.1
COMMD4-215ENST00000566843 GLULP15104 373 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 EDNRAP25101 427 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 DUSP5Q16690 384 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 ZNF660Q6AZW8 331 aaPredicted RBP14.43□□□□□ -0.1
COMMD4-215ENST00000566843 PWWP2BQ6NUJ5 590 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 ARL14Q8N4G2 192 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 ZNF454Q8N9F8 522 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 C15orf40Q8WUR7 153 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 NSMAFQ92636 917 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 HAVCR1Q96D42 359 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 TCEAL4Q96EI5 215 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 SIPA1Q96FS4 1042 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 FERD3LQ96RJ6 166 aa14.43□□□□□ -0.1
COMMD4-215ENST00000566843 MEPEQ9NQ76 525 aaPredicted RBP14.43□□□□□ -0.1
COMMD4-215ENST00000566843 APOBEC3BQ9UH17 382 aaKnown RBP14.43□□□□□ -0.1
COMMD4-215ENST00000566843 DCTDP32321 178 aa14.42□□□□□ -0.1
COMMD4-215ENST00000566843 RAB28P51157 221 aa14.42□□□□□ -0.1
COMMD4-215ENST00000566843 MAZP56270 477 aaKnown RBP14.42□□□□□ -0.1
COMMD4-215ENST00000566843 ZNF169Q14929 603 aaPredicted RBP14.42□□□□□ -0.1
COMMD4-215ENST00000566843 MLF2Q15773 248 aaPredicted RBP14.42□□□□□ -0.1
COMMD4-215ENST00000566843 ARHGAP11AQ6P4F7 1023 aa14.42□□□□□ -0.1
COMMD4-215ENST00000566843 MCATQ8IVS2 390 aaKnown RBP14.42□□□□□ -0.1
COMMD4-215ENST00000566843 SLC35F2Q8IXU6 374 aa14.42□□□□□ -0.1
COMMD4-215ENST00000566843 ZNF619Q8N2I2 560 aa14.42□□□□□ -0.1
COMMD4-215ENST00000566843 OR2L13Q8N349 312 aa14.42□□□□□ -0.1
COMMD4-215ENST00000566843 OR2L8Q8NGY9 312 aa14.42□□□□□ -0.1
COMMD4-215ENST00000566843 HMGB4Q8WW32 186 aa14.42□□□□□ -0.1
COMMD4-215ENST00000566843 LRFN5Q96NI6 719 aa14.42□□□□□ -0.1
COMMD4-215ENST00000566843 CNN2Q99439 309 aaKnown RBP14.42□□□□□ -0.1
COMMD4-215ENST00000566843 ZNF416Q9BWM5 594 aa14.42□□□□□ -0.1
COMMD4-215ENST00000566843 TTTY10Q9BZA0 68 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms