RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 C3P1Q6ZMU1 363 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 RALGPS2Q86X27 583 aaPredicted RBP9.68□□□□□ -0.86
UBFD1-205ENST00000566136 TMC8Q8IU68 726 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 PLD3Q8IV08 490 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 MARCH1Q8TCQ1 289 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 ZNF597Q96LX8 424 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 TMEM79Q9BSE2 394 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 TMCO1Q9UM00 188 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 CCL26Q9Y258 94 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 ARHGEF33A8MVX0 844 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 C1QTNF3-AMACRE9PGA6 284 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 H0YJX3 145 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 SNAI2O43623 268 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 FURINP09958 794 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 RPS3P23396 243 aaKnown RBP eCLIP9.68□□□□□ -0.86
UBFD1-205ENST00000566136 SPAM1P38567 509 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 C21orf59P57076 290 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 OR2B6P58173 313 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 RPL38P63173 70 aaKnown RBP9.68□□□□□ -0.86
UBFD1-205ENST00000566136 BNIP2Q12982 314 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 ACKR1Q16570 336 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 CYP51A1Q16850 503 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 RFTN2Q52LD8 501 aaPredicted RBP9.68□□□□□ -0.86
UBFD1-205ENST00000566136 OR52W1Q6IF63 320 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 LCN8Q6JVE9 175 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 NANOGP8Q6NSW7 305 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 NAGSQ8N159 534 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 FBXL6Q8N531 539 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 HM13Q8TCT9 377 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 NPAS1Q99742 590 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 PCGF1Q9BSM1 259 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 ST6GALNAC5Q9BVH7 336 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 TRIM15Q9C019 465 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 SFXN1Q9H9B4 322 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 NANOGQ9H9S0 305 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 ARMC1Q9NVT9 282 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 KLF2Q9Y5W3 355 aaPredicted RBP9.68□□□□□ -0.86
UBFD1-205ENST00000566136 OR6C70A6NIJ9 312 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 LEFTY2O00292 366 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 NBR2O15453 112 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 CCL16O15467 120 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 TNFAIP8O95379 198 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 TFAP2AP05549 437 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 ERCC1P07992 297 aaPredicted RBP9.67□□□□□ -0.86
UBFD1-205ENST00000566136 CSNK1DP48730 415 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 P2RX3P56373 397 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 MTPNP58546 118 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 HMGCS1Q01581 520 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 COQ5Q5HYK3 327 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 FAM166AQ6J272 317 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 ABHD12BQ7Z5M8 362 aaPredicted RBP9.67□□□□□ -0.86
UBFD1-205ENST00000566136 S100A7AQ86SG5 101 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 CCDC190Q86UF4 302 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 ZFAND4Q86XD8 727 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 CLEC4FQ8N1N0 589 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 CBR4Q8N4T8 237 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 OR2AP1Q8NGE2 309 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 ELMO1Q92556 727 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 ACDQ96AP0 544 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 ZNF48Q96MX3 618 aaPredicted RBP9.67□□□□□ -0.86
UBFD1-205ENST00000566136 KRTAP3-3Q9BYR6 98 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 KRTAP3-2Q9BYR7 98 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 TRIM4Q9C037 500 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 ZDHHC6Q9H6R6 413 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 CD84Q9UIB8 345 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 UTS2RQ9UKP6 389 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 TMED3Q9Y3Q3 217 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 OARD1Q9Y530 152 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 DENND4CQ5VZ89 1909 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 TRBV5-4A0A0C4DH59 114 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 RFPL2O75678 378 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 GLUD1P00367 558 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 H2AFB2P0C5Z0 115 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 OR4D2P58180 307 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 NAA20P61599 178 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 PTGR1Q14914 329 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 GPRC6AQ5T6X5 926 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 C22orf34Q6ZV56 151 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 EXD3Q8N9H8 876 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 CHDHQ8NE62 594 aaPredicted RBP9.67□□□□□ -0.86
UBFD1-205ENST00000566136 NETO1Q8TDF5 533 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 GGHQ92820 318 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 GCDHQ92947 438 aaPredicted RBP9.67□□□□□ -0.86
UBFD1-205ENST00000566136 VOPP1Q96AW1 172 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 SEPHS2Q99611 448 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 OR51B6Q9H340 312 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 HEBP1Q9NRV9 189 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 DUS2Q9NX74 493 aaKnown RBP9.67□□□□□ -0.86
UBFD1-205ENST00000566136 OPTCQ9UBM4 332 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 PLEKHB1Q9UF11 243 aaPredicted RBP9.67□□□□□ -0.86
UBFD1-205ENST00000566136 CROCCQ5TZA2 2017 aa9.67□□□□□ -0.86
UBFD1-205ENST00000566136 C2orf16Q68DN1 1984 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 TRAV19A0A0A6YYK7 116 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 PDZK1P1A8MUH7 402 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 PPIAL4DF5H284 164 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 MSR1P21757 451 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 LHCGRP22888 699 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 PSMB6P28072 239 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 PTGER4P35408 488 aa9.66□□□□□ -0.86
UBFD1-205ENST00000566136 CCR2P41597 374 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms