RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 CPED1A4D0V7 1026 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 ARRDC5A6NEK1 342 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 SLC9B1P1A6NJY1 282 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 TMEM200CA6NKL6 621 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 TFP02787 698 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 WNT1P04628 370 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 S100A11P31949 105 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 MAS1LP35410 378 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 DGKEP52429 567 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 HBMQ6B0K9 141 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 TSPAN33Q86UF1 283 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 KCNRGQ8N5I3 272 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 ARIH2OSQ8N7S6 290 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 ZNF511Q8NB15 262 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 OR9Q2Q8NGE9 314 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 FRZBQ92765 325 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 WNT8BQ93098 351 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 ABHD1Q96SE0 405 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 TCF7L1Q9HCS4 588 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 MIEF1Q9NQG6 463 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 ADARB2Q9NS39 739 aaKnown RBP2.72□□□□□ -1.97
CHD9-218ENST00000566029 LUZP4Q9P127 313 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 FBXW11Q9UKB1 542 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 GNG14A0A1W2PPG7 69 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 A6NCN8 305 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 FAM171A2A8MVW0 826 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 SNRPGP15A8MWD9 76 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 KDM4EB2RXH2 506 aaPredicted RBP2.71□□□□□ -1.97
CHD9-218ENST00000566029 TGM5O43548 720 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 LDB2O43679 373 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 TLR5O60602 858 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 PIAS2O75928 621 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 VSIG10L2P0DP72 767 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 INSRRP14616 1297 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 ZNF25P17030 456 aaPredicted RBP2.71□□□□□ -1.97
CHD9-218ENST00000566029 ADCYAP1P18509 176 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 MAKP20794 623 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 HTR5AP47898 357 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 DGKGP49619 791 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 FABP6P51161 128 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 CCR4P51679 360 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 ZNF140P52738 457 aaPredicted RBP2.71□□□□□ -1.97
CHD9-218ENST00000566029 CAV3P56539 151 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 HMGN3Q15651 99 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 PLK5Q496M5 336 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 ARSIQ5FYB1 569 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 TMEM255AQ5JRV8 349 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 ANGPTL5Q86XS5 388 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 SEMA6DQ8NFY4 1073 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 OR5B3Q8NH48 314 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 RXFP4Q8TDU9 374 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 OVCA2Q8WZ82 227 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 MARS2Q96GW9 593 aaKnown RBP2.71□□□□□ -1.97
CHD9-218ENST00000566029 TECTBQ96PL2 329 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 SLITRK2Q9H156 845 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 LYRM2Q9NU23 88 aaPredicted RBP2.71□□□□□ -1.97
CHD9-218ENST00000566029 SNX11Q9Y5W9 270 aa2.71□□□□□ -1.97
CHD9-218ENST00000566029 NPEPPSL1A6NEC2 478 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 ANKUB1A6NFN9 424 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 MAN2B1O00754 1011 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 SDC3O75056 442 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 REM1O75628 298 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 NCR1O76036 304 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 TIMP2P16035 220 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 TYRP1P17643 537 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 ATF1P18846 271 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 MTMR1Q13613 665 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 PCBP2Q15366 365 aaKnown RBP eCLIP2.71□□□□□ -1.983e-7■■■■■ 36.8
CHD9-218ENST00000566029 ATAT1Q5SQI0 421 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 PAQR3Q6TCH7 311 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 TECPR1Q7Z6L1 1165 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 SAMD12Q8N8I0 201 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 GPRC5AQ8NFJ5 357 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 CMTM7Q96FZ5 175 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 CDKN2AIPNLQ96HQ2 116 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 TAAR9Q96RI9 348 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 DUSP16Q9BY84 665 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 DUSP15Q9H1R2 295 aaPredicted RBP2.71□□□□□ -1.98
CHD9-218ENST00000566029 ABCG5Q9H222 651 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 MRPS30Q9NP92 439 aaKnown RBP2.71□□□□□ -1.98
CHD9-218ENST00000566029 RGPD2P0DJD1 1756 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 PCM1Q15154 2024 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 PPIHO43447 177 aaKnown RBP2.71□□□□□ -1.98
CHD9-218ENST00000566029 NDUFB6O95139 128 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 FTH1P19P0C7X4 201 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 IFNGR1P15260 489 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 PSMB1P20618 241 aaKnown RBP2.71□□□□□ -1.98
CHD9-218ENST00000566029 EPHA1P21709 976 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 CD82P27701 267 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 RPL38P63173 70 aaKnown RBP2.71□□□□□ -1.98
CHD9-218ENST00000566029 RBPJQ06330 500 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 ALKBH1Q13686 389 aaKnown RBP2.71□□□□□ -1.98
CHD9-218ENST00000566029 FNDC3BQ53EP0 1204 aaKnown RBP2.71□□□□□ -1.98
CHD9-218ENST00000566029 PAQR9Q6ZVX9 377 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 KDF1Q8NAX2 398 aaPredicted RBP2.71□□□□□ -1.98
CHD9-218ENST00000566029 OR51Q1Q8NH59 317 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 JAM3Q9BX67 310 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 TMEM185BQ9H7F4 350 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 LHX6Q9UPM6 363 aa2.71□□□□□ -1.98
CHD9-218ENST00000566029 PSME4Q14997 1843 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms