RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 CDRT15Q96T59 188 aa18.81■□□□□ 0.6
SHCBP1-205ENST00000566016 C1orf21Q9H246 121 aa18.81■□□□□ 0.6
SHCBP1-205ENST00000566016 KLHL9Q9P2J3 617 aa18.81■□□□□ 0.6
SHCBP1-205ENST00000566016 FOXD3Q9UJU5 478 aaPredicted RBP18.81■□□□□ 0.6
SHCBP1-205ENST00000566016 EMC9Q9Y3B6 208 aa18.81■□□□□ 0.6
SHCBP1-205ENST00000566016 A0A087WUJ7 227 aa18.8■□□□□ 0.6
SHCBP1-205ENST00000566016 CHP2O43745 196 aa18.8■□□□□ 0.6
SHCBP1-205ENST00000566016 FZD7O75084 574 aa18.8■□□□□ 0.6
SHCBP1-205ENST00000566016 PRKD3O94806 890 aa18.8■□□□□ 0.6
SHCBP1-205ENST00000566016 GPIP06744 558 aa18.8■□□□□ 0.6
SHCBP1-205ENST00000566016 IGFBP2P18065 325 aa18.8■□□□□ 0.6
SHCBP1-205ENST00000566016 ENTPD8Q5MY95 495 aa18.8■□□□□ 0.6
SHCBP1-205ENST00000566016 C1orf140Q5VVS0 124 aa18.8■□□□□ 0.6
SHCBP1-205ENST00000566016 CBLL1Q75N03 491 aa18.8■□□□□ 0.6
SHCBP1-205ENST00000566016 MCEMP1Q8IX19 187 aa18.8■□□□□ 0.6
SHCBP1-205ENST00000566016 CNEP1R1Q8N9A8 125 aa18.8■□□□□ 0.6
SHCBP1-205ENST00000566016 OR6K3Q8NGY3 331 aa18.8■□□□□ 0.6
SHCBP1-205ENST00000566016 VANGL1Q8TAA9 524 aaPredicted RBP18.8■□□□□ 0.6
SHCBP1-205ENST00000566016 ADAMTS16Q8TE57 1224 aa18.8■□□□□ 0.6
SHCBP1-205ENST00000566016 STARD4Q96DR4 205 aa18.8■□□□□ 0.6
SHCBP1-205ENST00000566016 LRRC46Q96FV0 321 aa18.8■□□□□ 0.6
SHCBP1-205ENST00000566016 PRR14Q9BWN1 585 aa18.8■□□□□ 0.6
SHCBP1-205ENST00000566016 BCO1Q9HAY6 547 aa18.8■□□□□ 0.6
SHCBP1-205ENST00000566016 KLHL13Q9P2N7 655 aa18.8■□□□□ 0.6
SHCBP1-205ENST00000566016 TRAPPC13A5PLN9 417 aa18.79■□□□□ 0.6
SHCBP1-205ENST00000566016 LIPT2A6NK58 231 aa18.79■□□□□ 0.6
SHCBP1-205ENST00000566016 MSTNO14793 375 aa18.79■□□□□ 0.6
SHCBP1-205ENST00000566016 CD8BP10966 210 aa18.79■□□□□ 0.6
SHCBP1-205ENST00000566016 IMPDH2P12268 514 aa18.79■□□□□ 0.6
SHCBP1-205ENST00000566016 GRNP28799 593 aaKnown RBP18.79■□□□□ 0.6
SHCBP1-205ENST00000566016 AGTR1P30556 359 aa18.79■□□□□ 0.6
SHCBP1-205ENST00000566016 CTBP2P56545 445 aa18.79■□□□□ 0.6
SHCBP1-205ENST00000566016 EGR4Q05215 589 aa18.79■□□□□ 0.6
SHCBP1-205ENST00000566016 BNIP2Q12982 314 aa18.79■□□□□ 0.6
SHCBP1-205ENST00000566016 PDK3Q15120 406 aa18.79■□□□□ 0.6
SHCBP1-205ENST00000566016 PAQR6Q6TCH4 344 aa18.79■□□□□ 0.6
SHCBP1-205ENST00000566016 RBM45Q8IUH3 476 aaKnown RBP18.79■□□□□ 0.6
SHCBP1-205ENST00000566016 RNF148Q8N7C7 305 aa18.79■□□□□ 0.6
SHCBP1-205ENST00000566016 TMEM43Q9BTV4 400 aa18.79■□□□□ 0.6
SHCBP1-205ENST00000566016 GORASP2Q9H8Y8 452 aa18.79■□□□□ 0.6
SHCBP1-205ENST00000566016 NPDC1Q9NQX5 325 aaPredicted RBP18.79■□□□□ 0.6
SHCBP1-205ENST00000566016 MAGEL2Q9UJ55 1249 aa18.79■□□□□ 0.6
SHCBP1-205ENST00000566016 EEF1E1-BLOC1S5C9J1V9 151 aa18.78■□□□□ 0.6
SHCBP1-205ENST00000566016 EEF1E1O43324 174 aaKnown RBP18.78■□□□□ 0.6
SHCBP1-205ENST00000566016 PCYT1AP49585 367 aa18.78■□□□□ 0.6
SHCBP1-205ENST00000566016 CDH12P55289 794 aa18.78■□□□□ 0.6
SHCBP1-205ENST00000566016 VWA1Q6PCB0 445 aa18.78■□□□□ 0.6
SHCBP1-205ENST00000566016 MFSD8Q8NHS3 518 aa18.78■□□□□ 0.6
SHCBP1-205ENST00000566016 PIGXQ8TBF5 258 aa18.78■□□□□ 0.6
SHCBP1-205ENST00000566016 GEMIN6Q8WXD5 167 aaKnown RBP18.78■□□□□ 0.6
SHCBP1-205ENST00000566016 FAM162AQ96A26 154 aa18.78■□□□□ 0.6
SHCBP1-205ENST00000566016 TPD52L3Q96J77 140 aa18.78■□□□□ 0.6
SHCBP1-205ENST00000566016 MPP4Q96JB8 637 aa18.78■□□□□ 0.6
SHCBP1-205ENST00000566016 PSD2Q9BQI7 771 aa18.78■□□□□ 0.6
SHCBP1-205ENST00000566016 ENKD1Q9H0I2 346 aa18.78■□□□□ 0.6
SHCBP1-205ENST00000566016 EGFL7Q9UHF1 273 aa18.78■□□□□ 0.6
SHCBP1-205ENST00000566016 RPS6KA6Q9UK32 745 aa18.78■□□□□ 0.6
SHCBP1-205ENST00000566016 IGKV1D-42A0A075B6H8 117 aa18.77■□□□□ 0.6
SHCBP1-205ENST00000566016 IGKV3D-15A0A087WSY6 115 aa18.77■□□□□ 0.6
SHCBP1-205ENST00000566016 CPSF4LA6NMK7 179 aaKnown RBP18.77■□□□□ 0.6
SHCBP1-205ENST00000566016 OR2T1O43869 369 aa18.77■□□□□ 0.6
SHCBP1-205ENST00000566016 GMNNO75496 209 aa18.77■□□□□ 0.6
SHCBP1-205ENST00000566016 AHSA1O95433 338 aa18.77■□□□□ 0.6
SHCBP1-205ENST00000566016 SERPINA1P01009 418 aa18.77■□□□□ 0.6
SHCBP1-205ENST00000566016 CGAP01215 116 aa18.77■□□□□ 0.6
SHCBP1-205ENST00000566016 PEX19P40855 299 aa18.77■□□□□ 0.6
SHCBP1-205ENST00000566016 SLC16A1P53985 500 aa18.77■□□□□ 0.6
SHCBP1-205ENST00000566016 OR2B6P58173 313 aa18.77■□□□□ 0.6
SHCBP1-205ENST00000566016 GLYATQ6IB77 296 aa18.77■□□□□ 0.6
SHCBP1-205ENST00000566016 LINC00114Q6XXX2 140 aa18.77■□□□□ 0.6
SHCBP1-205ENST00000566016 BTLAQ7Z6A9 289 aa18.77■□□□□ 0.6
SHCBP1-205ENST00000566016 TSPYL5Q86VY4 417 aaPredicted RBP18.77■□□□□ 0.6
SHCBP1-205ENST00000566016 RNASE6Q93091 150 aaKnown RBP18.77■□□□□ 0.6
SHCBP1-205ENST00000566016 ZNF426Q9BUY5 554 aa18.77■□□□□ 0.6
SHCBP1-205ENST00000566016 PTDSS2Q9BVG9 487 aa18.77■□□□□ 0.6
SHCBP1-205ENST00000566016 ING1Q9UK53 422 aaPredicted RBP18.77■□□□□ 0.6
SHCBP1-205ENST00000566016 DCHS2Q6V1P9 2916 aa18.77■□□□□ 0.6
SHCBP1-205ENST00000566016 IGHV3-15A0A0B4J1V0 119 aa18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 ZNF724A8MTY0 619 aa18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 A8MXE2 369 aa18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 FTCDNL1E5RQL4 147 aa18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 C19orf84I3L1E1 186 aa18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 ZNF682O95780 498 aa18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 YES1P07947 543 aa18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 NCK1P16333 377 aa18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 TNFRSF1BP20333 461 aa18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 FPR1P21462 350 aa18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 SIRPAP78324 504 aa18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 RASGEF1BQ0VAM2 473 aa18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 CEACAM7Q14002 265 aa18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 FAM69AQ5T7M9 428 aa18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 VTCN1Q7Z7D3 282 aa18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 FAM156AQ8NDB6 213 aa18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 OR6S1Q8NH40 331 aa18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 EPYCQ99645 322 aa18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 SPOCK3Q9BQ16 436 aa18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 NAA11Q9BSU3 229 aaPredicted RBP18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 TAPBPLQ9BX59 468 aa18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 PLSCR4Q9NRQ2 329 aa18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 DCAF13Q9NV06 445 aaKnown RBP18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms